Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0022_G24
(77 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL132860-29|CAB60505.2| 386|Caenorhabditis elegans Hypothetical... 24 2.3
AL110484-21|CAB54413.1| 234|Caenorhabditis elegans Hypothetical... 26 3.2
Z75952-5|CAB00093.2| 149|Caenorhabditis elegans Hypothetical pr... 26 4.2
Z66499-4|CAA91301.1| 164|Caenorhabditis elegans Hypothetical pr... 26 4.2
Z49886-6|CAI79131.1| 149|Caenorhabditis elegans Hypothetical pr... 26 4.2
Z49886-5|CAA90055.1| 152|Caenorhabditis elegans Hypothetical pr... 26 4.2
U55854-7|AAK68158.1| 166|Caenorhabditis elegans Hypothetical pr... 26 4.2
U55854-6|AAK68161.1| 197|Caenorhabditis elegans Hypothetical pr... 26 4.2
X77495-1|CAA54629.1| 402|Caenorhabditis elegans lag-2 protein. 25 5.5
AC024205-1|AAF36047.1| 402|Caenorhabditis elegans Lin-12 and gl... 25 5.5
Z19157-2|CAA79568.1| 826|Caenorhabditis elegans Hypothetical pr... 25 7.3
Z71258-13|CAN86573.1| 582|Caenorhabditis elegans Hypothetical p... 25 9.6
Z71258-6|CAA95779.1| 636|Caenorhabditis elegans Hypothetical pr... 25 9.6
>AL132860-29|CAB60505.2| 386|Caenorhabditis elegans Hypothetical
protein Y56A3A.28 protein.
Length = 386
Score = 23.8 bits (49), Expect(2) = 2.3
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = -1
Query: 68 NSAVVSRQQTPPPP 27
N A S+QQ PPPP
Sbjct: 84 NEASPSKQQQPPPP 97
Score = 21.4 bits (43), Expect(2) = 2.3
Identities = 7/12 (58%), Positives = 9/12 (75%)
Frame = -1
Query: 50 RQQTPPPPRLVP 15
+QQ PPPP+ P
Sbjct: 91 QQQPPPPPKSSP 102
>AL110484-21|CAB54413.1| 234|Caenorhabditis elegans Hypothetical
protein Y38E10A.21 protein.
Length = 234
Score = 26.2 bits (55), Expect = 3.2
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = -1
Query: 71 SNSAVVSRQQTPPPPRLVPN 12
+N ++S Q PP PRL PN
Sbjct: 57 NNMNMISPNQVPPSPRLSPN 76
>Z75952-5|CAB00093.2| 149|Caenorhabditis elegans Hypothetical
protein F29D10.2 protein.
Length = 149
Score = 25.8 bits (54), Expect = 4.2
Identities = 10/25 (40%), Positives = 10/25 (40%)
Frame = +2
Query: 2 GCMNSARGGEGVGFAVC*QLLNCCC 76
GC GG G G C CCC
Sbjct: 53 GCCGCGGGGGGCGCCCCRPRCCCCC 77
>Z66499-4|CAA91301.1| 164|Caenorhabditis elegans Hypothetical
protein T01B7.8 protein.
Length = 164
Score = 25.8 bits (54), Expect = 4.2
Identities = 10/25 (40%), Positives = 10/25 (40%)
Frame = +2
Query: 2 GCMNSARGGEGVGFAVC*QLLNCCC 76
GC GG G G C CCC
Sbjct: 71 GCCGCGGGGGGCGCCCCRPRCCCCC 95
>Z49886-6|CAI79131.1| 149|Caenorhabditis elegans Hypothetical
protein C06A1.7 protein.
Length = 149
Score = 25.8 bits (54), Expect = 4.2
Identities = 10/25 (40%), Positives = 10/25 (40%)
Frame = +2
Query: 2 GCMNSARGGEGVGFAVC*QLLNCCC 76
GC GG G G C CCC
Sbjct: 55 GCCGCGGGGGGCGCCCCRPRCCCCC 79
>Z49886-5|CAA90055.1| 152|Caenorhabditis elegans Hypothetical
protein C06A1.6 protein.
Length = 152
Score = 25.8 bits (54), Expect = 4.2
Identities = 10/25 (40%), Positives = 10/25 (40%)
Frame = +2
Query: 2 GCMNSARGGEGVGFAVC*QLLNCCC 76
GC GG G G C CCC
Sbjct: 58 GCCGCGGGGGGCGCCCCRPRCCCCC 82
>U55854-7|AAK68158.1| 166|Caenorhabditis elegans Hypothetical
protein C04G6.10 protein.
Length = 166
Score = 25.8 bits (54), Expect = 4.2
Identities = 10/25 (40%), Positives = 10/25 (40%)
Frame = +2
Query: 2 GCMNSARGGEGVGFAVC*QLLNCCC 76
GC GG G G C CCC
Sbjct: 72 GCCGCGGGGGGCGCCCCRPRCCCCC 96
>U55854-6|AAK68161.1| 197|Caenorhabditis elegans Hypothetical
protein C04G6.7 protein.
Length = 197
Score = 25.8 bits (54), Expect = 4.2
Identities = 10/25 (40%), Positives = 10/25 (40%)
Frame = +2
Query: 2 GCMNSARGGEGVGFAVC*QLLNCCC 76
GC GG G G C CCC
Sbjct: 73 GCCGCGGGGGGCGCCCCRPRCCCCC 97
>X77495-1|CAA54629.1| 402|Caenorhabditis elegans lag-2 protein.
Length = 402
Score = 25.4 bits (53), Expect = 5.5
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = -1
Query: 74 NSNSAVVSRQQTPPPPRLVPNS 9
++N V ++ TPPPP L P S
Sbjct: 374 SNNEYAVIQKSTPPPPSLSPPS 395
>AC024205-1|AAF36047.1| 402|Caenorhabditis elegans Lin-12 and glp-1
phenotype protein2 protein.
Length = 402
Score = 25.4 bits (53), Expect = 5.5
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = -1
Query: 74 NSNSAVVSRQQTPPPPRLVPNS 9
++N V ++ TPPPP L P S
Sbjct: 374 SNNEYAVIQKSTPPPPSLSPPS 395
>Z19157-2|CAA79568.1| 826|Caenorhabditis elegans Hypothetical
protein ZC84.3 protein.
Length = 826
Score = 25.0 bits (52), Expect = 7.3
Identities = 10/14 (71%), Positives = 11/14 (78%)
Frame = +1
Query: 1 GLHEFGTRRGGGGV 42
GL EFG R+GG GV
Sbjct: 537 GLPEFGARKGGTGV 550
>Z71258-13|CAN86573.1| 582|Caenorhabditis elegans Hypothetical
protein C01H6.7b protein.
Length = 582
Score = 24.6 bits (51), Expect = 9.6
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = -1
Query: 56 VSRQQTPPPPRLVPNSCS 3
V ++ TPPPPR P+ S
Sbjct: 131 VPKEPTPPPPRKAPSFSS 148
>Z71258-6|CAA95779.1| 636|Caenorhabditis elegans Hypothetical
protein C01H6.7 protein.
Length = 636
Score = 24.6 bits (51), Expect = 9.6
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = -1
Query: 56 VSRQQTPPPPRLVPNSCS 3
V ++ TPPPPR P+ S
Sbjct: 131 VPKEPTPPPPRKAPSFSS 148
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,263,315
Number of Sequences: 27780
Number of extensions: 23099
Number of successful extensions: 211
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 197
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 209
length of database: 12,740,198
effective HSP length: 7
effective length of database: 12,545,738
effective search space used: 225823284
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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