Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0022_G22
(179 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z50152-2|CAA90514.1| 3358|Drosophila melanogaster trithorax prot... 26 6.1
Z50152-1|CAA90513.1| 3726|Drosophila melanogaster trithorax prot... 26 6.1
Z31725-2|CAA83515.1| 3358|Drosophila melanogaster predicted trit... 26 6.1
Z31725-1|CAA83516.1| 3726|Drosophila melanogaster predicted trit... 26 6.1
M31617-1|AAA29025.1| 3759|Drosophila melanogaster protein ( D.me... 26 6.1
AE014297-1828|AAX52951.1| 3358|Drosophila melanogaster CG8651-PE... 26 6.1
AE014297-1827|AAN13601.1| 3358|Drosophila melanogaster CG8651-PC... 26 6.1
AE014297-1826|AAN13600.1| 3358|Drosophila melanogaster CG8651-PB... 26 6.1
AE014297-1825|AAN13599.1| 3726|Drosophila melanogaster CG8651-PD... 26 6.1
AE014297-1824|AAF55041.2| 3726|Drosophila melanogaster CG8651-PA... 26 6.1
AY051956-1|AAK93380.1| 258|Drosophila melanogaster LD42595p pro... 26 8.0
AE014298-2857|AAF48964.1| 2037|Drosophila melanogaster CG14200-P... 26 8.0
AE014297-908|AAN13416.1| 258|Drosophila melanogaster CG8121-PC,... 26 8.0
AE014297-907|AAN13415.1| 258|Drosophila melanogaster CG8121-PB,... 26 8.0
AE014297-906|AAF54359.1| 258|Drosophila melanogaster CG8121-PA,... 26 8.0
>Z50152-2|CAA90514.1| 3358|Drosophila melanogaster trithorax protein
trxI protein.
Length = 3358
Score = 26.2 bits (55), Expect = 6.1
Identities = 13/41 (31%), Positives = 20/41 (48%)
Frame = +2
Query: 8 GYHLCVTIIIIKRNGAGFCGTF*LSYSIYRSICCILYFVFC 130
G+ L VT + +R CG+ L I+ + CC Y +C
Sbjct: 886 GFGLIVTETVAQRALCFLCGSTGLDPLIFCACCCEPYHQYC 926
>Z50152-1|CAA90513.1| 3726|Drosophila melanogaster trithorax protein
trxII protein.
Length = 3726
Score = 26.2 bits (55), Expect = 6.1
Identities = 13/41 (31%), Positives = 20/41 (48%)
Frame = +2
Query: 8 GYHLCVTIIIIKRNGAGFCGTF*LSYSIYRSICCILYFVFC 130
G+ L VT + +R CG+ L I+ + CC Y +C
Sbjct: 1254 GFGLIVTETVAQRALCFLCGSTGLDPLIFCACCCEPYHQYC 1294
>Z31725-2|CAA83515.1| 3358|Drosophila melanogaster predicted trithorax
protein protein.
Length = 3358
Score = 26.2 bits (55), Expect = 6.1
Identities = 13/41 (31%), Positives = 20/41 (48%)
Frame = +2
Query: 8 GYHLCVTIIIIKRNGAGFCGTF*LSYSIYRSICCILYFVFC 130
G+ L VT + +R CG+ L I+ + CC Y +C
Sbjct: 886 GFGLIVTETVAQRALCFLCGSTGLDPLIFCACCCEPYHQYC 926
>Z31725-1|CAA83516.1| 3726|Drosophila melanogaster predicted trithorax
protein protein.
Length = 3726
Score = 26.2 bits (55), Expect = 6.1
Identities = 13/41 (31%), Positives = 20/41 (48%)
Frame = +2
Query: 8 GYHLCVTIIIIKRNGAGFCGTF*LSYSIYRSICCILYFVFC 130
G+ L VT + +R CG+ L I+ + CC Y +C
Sbjct: 1254 GFGLIVTETVAQRALCFLCGSTGLDPLIFCACCCEPYHQYC 1294
>M31617-1|AAA29025.1| 3759|Drosophila melanogaster protein (
D.melanogaster zinc-binding protein (trithorax) mRNA,
complete cds. ).
Length = 3759
Score = 26.2 bits (55), Expect = 6.1
Identities = 13/41 (31%), Positives = 20/41 (48%)
Frame = +2
Query: 8 GYHLCVTIIIIKRNGAGFCGTF*LSYSIYRSICCILYFVFC 130
G+ L VT + +R CG+ L I+ + CC Y +C
Sbjct: 1254 GFGLIVTETVAQRALCFLCGSTGLDPLIFCACCCEPYHQYC 1294
>AE014297-1828|AAX52951.1| 3358|Drosophila melanogaster CG8651-PE,
isoform E protein.
Length = 3358
Score = 26.2 bits (55), Expect = 6.1
Identities = 13/41 (31%), Positives = 20/41 (48%)
Frame = +2
Query: 8 GYHLCVTIIIIKRNGAGFCGTF*LSYSIYRSICCILYFVFC 130
G+ L VT + +R CG+ L I+ + CC Y +C
Sbjct: 886 GFGLIVTETVAQRALCFLCGSTGLDPLIFCACCCEPYHQYC 926
>AE014297-1827|AAN13601.1| 3358|Drosophila melanogaster CG8651-PC,
isoform C protein.
Length = 3358
Score = 26.2 bits (55), Expect = 6.1
Identities = 13/41 (31%), Positives = 20/41 (48%)
Frame = +2
Query: 8 GYHLCVTIIIIKRNGAGFCGTF*LSYSIYRSICCILYFVFC 130
G+ L VT + +R CG+ L I+ + CC Y +C
Sbjct: 886 GFGLIVTETVAQRALCFLCGSTGLDPLIFCACCCEPYHQYC 926
>AE014297-1826|AAN13600.1| 3358|Drosophila melanogaster CG8651-PB,
isoform B protein.
Length = 3358
Score = 26.2 bits (55), Expect = 6.1
Identities = 13/41 (31%), Positives = 20/41 (48%)
Frame = +2
Query: 8 GYHLCVTIIIIKRNGAGFCGTF*LSYSIYRSICCILYFVFC 130
G+ L VT + +R CG+ L I+ + CC Y +C
Sbjct: 886 GFGLIVTETVAQRALCFLCGSTGLDPLIFCACCCEPYHQYC 926
>AE014297-1825|AAN13599.1| 3726|Drosophila melanogaster CG8651-PD,
isoform D protein.
Length = 3726
Score = 26.2 bits (55), Expect = 6.1
Identities = 13/41 (31%), Positives = 20/41 (48%)
Frame = +2
Query: 8 GYHLCVTIIIIKRNGAGFCGTF*LSYSIYRSICCILYFVFC 130
G+ L VT + +R CG+ L I+ + CC Y +C
Sbjct: 1254 GFGLIVTETVAQRALCFLCGSTGLDPLIFCACCCEPYHQYC 1294
>AE014297-1824|AAF55041.2| 3726|Drosophila melanogaster CG8651-PA,
isoform A protein.
Length = 3726
Score = 26.2 bits (55), Expect = 6.1
Identities = 13/41 (31%), Positives = 20/41 (48%)
Frame = +2
Query: 8 GYHLCVTIIIIKRNGAGFCGTF*LSYSIYRSICCILYFVFC 130
G+ L VT + +R CG+ L I+ + CC Y +C
Sbjct: 1254 GFGLIVTETVAQRALCFLCGSTGLDPLIFCACCCEPYHQYC 1294
>AY051956-1|AAK93380.1| 258|Drosophila melanogaster LD42595p
protein.
Length = 258
Score = 25.8 bits (54), Expect = 8.0
Identities = 9/22 (40%), Positives = 16/22 (72%)
Frame = +1
Query: 73 LTIVFYI*IYLLYTLFCILSLY 138
L + + + LL+T+FC+LS+Y
Sbjct: 179 LYFAYNVIMVLLWTIFCVLSIY 200
>AE014298-2857|AAF48964.1| 2037|Drosophila melanogaster CG14200-PA
protein.
Length = 2037
Score = 25.8 bits (54), Expect = 8.0
Identities = 15/51 (29%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Frame = -2
Query: 160 TSGNLSTNTMTKYKIKYTTNRSIYRIR*LKCTTKPSTVTFNYN-NSHTQVI 11
+S N ++ T Y + T NR+ R + TT P+T + SHT ++
Sbjct: 230 SSNNFGSSNSTTYTVTSTANRTTSRTA-SRTTTSPATSPRRASRRSHTTIV 279
>AE014297-908|AAN13416.1| 258|Drosophila melanogaster CG8121-PC,
isoform C protein.
Length = 258
Score = 25.8 bits (54), Expect = 8.0
Identities = 9/22 (40%), Positives = 16/22 (72%)
Frame = +1
Query: 73 LTIVFYI*IYLLYTLFCILSLY 138
L + + + LL+T+FC+LS+Y
Sbjct: 179 LYFAYNVIMVLLWTIFCVLSIY 200
>AE014297-907|AAN13415.1| 258|Drosophila melanogaster CG8121-PB,
isoform B protein.
Length = 258
Score = 25.8 bits (54), Expect = 8.0
Identities = 9/22 (40%), Positives = 16/22 (72%)
Frame = +1
Query: 73 LTIVFYI*IYLLYTLFCILSLY 138
L + + + LL+T+FC+LS+Y
Sbjct: 179 LYFAYNVIMVLLWTIFCVLSIY 200
>AE014297-906|AAF54359.1| 258|Drosophila melanogaster CG8121-PA,
isoform A protein.
Length = 258
Score = 25.8 bits (54), Expect = 8.0
Identities = 9/22 (40%), Positives = 16/22 (72%)
Frame = +1
Query: 73 LTIVFYI*IYLLYTLFCILSLY 138
L + + + LL+T+FC+LS+Y
Sbjct: 179 LYFAYNVIMVLLWTIFCVLSIY 200
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,529,870
Number of Sequences: 53049
Number of extensions: 115759
Number of successful extensions: 198
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 198
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 198
length of database: 24,988,368
effective HSP length: 40
effective length of database: 22,866,408
effective search space used: 434461752
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -