Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0022_G19
         (410 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X98186-1|CAA66861.1|  269|Anopheles gambiae put. S3a ribosomal p...   167   1e-43
AY146739-1|AAO12099.1|  176|Anopheles gambiae odorant-binding pr...    23   5.7  
AY062207-1|AAL58568.1|  504|Anopheles gambiae cytochrome P450 CY...    23   5.7  

>X98186-1|CAA66861.1|  269|Anopheles gambiae put. S3a ribosomal
           protein homologue protein.
          Length = 269

 Score =  167 bits (406), Expect = 1e-43
 Identities = 81/136 (59%), Positives = 99/136 (72%), Gaps = 5/136 (3%)
 Frame = +2

Query: 11  DGYVLRVFCIGFTNKDTLSQRKTCYAQHTQVRAIRKKMCEIITRDVTSSELREVVNKLIP 190
           DG++LRVFCIGFT KD++SQRKTCYAQH+Q++ IR KM  II R++TS++L+ VV KL+P
Sbjct: 134 DGFMLRVFCIGFTIKDSMSQRKTCYAQHSQIKNIRAKMTAIIKREITSTDLKGVVEKLLP 193

Query: 191 DSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFEISKLMXXXXXXXXXXXXXXXDKSE-- 364
           DSIAKDIEKAC  +YPL DV IRKVKVLK+PRF++S LM                 +   
Sbjct: 194 DSIAKDIEKACQVVYPLHDVYIRKVKVLKKPRFDLSSLMELHGDGGGKAAEVSTGAASGV 253

Query: 365 ---RPEGYEPPVQESV 403
              RPEGYEPPVQ SV
Sbjct: 254 VVVRPEGYEPPVQASV 269


>AY146739-1|AAO12099.1|  176|Anopheles gambiae odorant-binding
           protein AgamOBP29 protein.
          Length = 176

 Score = 22.6 bits (46), Expect = 5.7
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = +2

Query: 113 RKKMCEIITRDVTSSELRE 169
           + K+  +IT+D+   ELRE
Sbjct: 106 KHKVLHVITKDIREHELRE 124


>AY062207-1|AAL58568.1|  504|Anopheles gambiae cytochrome P450
           CYP6S2 protein.
          Length = 504

 Score = 22.6 bits (46), Expect = 5.7
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = +3

Query: 72  ARHATLSIPKSAQSGKKCVKSSRA 143
           A H     PK+ +  +KCV+S+ A
Sbjct: 315 ALHLLAQHPKAQRKARKCVRSTLA 338


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 396,022
Number of Sequences: 2352
Number of extensions: 7282
Number of successful extensions: 12
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 33349914
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)