Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0022_G19
(410 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF034971-1|AAC62117.1| 268|Drosophila melanogaster ribosomal pr... 163 8e-41
AE014135-6|AAN06542.1| 163|Drosophila melanogaster CG2168-PD, i... 163 8e-41
AE014135-5|AAN06541.1| 218|Drosophila melanogaster CG2168-PB, i... 163 8e-41
AE014135-4|AAF59372.1| 268|Drosophila melanogaster CG2168-PA, i... 163 8e-41
Y10115-1|CAA71201.1| 270|Drosophila melanogaster ribosomal prot... 145 2e-35
AY070949-1|AAL48571.1| 217|Drosophila melanogaster RE04220p pro... 79 2e-15
AE013599-2921|AAF57537.1| 632|Drosophila melanogaster CG15904-P... 32 0.34
M26400-1|AAA28907.1| 2415|Drosophila melanogaster protein ( D.me... 27 7.3
BT023889-1|ABA81823.1| 1557|Drosophila melanogaster RE03775p pro... 27 7.3
BT016127-1|AAV37012.1| 367|Drosophila melanogaster GH23568p pro... 27 7.3
AE014298-2933|AAF49016.2| 367|Drosophila melanogaster CG32528-P... 27 7.3
AE014296-357|AAF47569.1| 2415|Drosophila melanogaster CG1977-PA ... 27 7.3
>AF034971-1|AAC62117.1| 268|Drosophila melanogaster ribosomal
protein S3a protein.
Length = 268
Score = 163 bits (396), Expect = 8e-41
Identities = 80/135 (59%), Positives = 98/135 (72%), Gaps = 4/135 (2%)
Frame = +2
Query: 11 DGYVLRVFCIGFTNKDTLSQRKTCYAQHTQVRAIRKKMCEIITRDVTSSELREVVNKLIP 190
DGY+LRVFCIGFT KD SQRKTCYAQ +QVR IR +M +IIT +V+ ++L+++VNKL
Sbjct: 134 DGYLLRVFCIGFTAKDQQSQRKTCYAQQSQVRKIRARMTDIITNEVSGADLKQLVNKLAL 193
Query: 191 DSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFEISKLMXXXXXXXXXXXXXXXDKS--- 361
DSIAKDIEK+C IYPL DV IRKVKVLK+PRF++SKL+
Sbjct: 194 DSIAKDIEKSCQRIYPLHDVYIRKVKVLKKPRFDVSKLLELHGDGGGKSVEAVVSSEGAV 253
Query: 362 -ERPEGYEPPVQESV 403
+RPEGYEPPVQE+V
Sbjct: 254 IDRPEGYEPPVQEAV 268
>AE014135-6|AAN06542.1| 163|Drosophila melanogaster CG2168-PD,
isoform D protein.
Length = 163
Score = 163 bits (396), Expect = 8e-41
Identities = 80/135 (59%), Positives = 98/135 (72%), Gaps = 4/135 (2%)
Frame = +2
Query: 11 DGYVLRVFCIGFTNKDTLSQRKTCYAQHTQVRAIRKKMCEIITRDVTSSELREVVNKLIP 190
DGY+LRVFCIGFT KD SQRKTCYAQ +QVR IR +M +IIT +V+ ++L+++VNKL
Sbjct: 29 DGYLLRVFCIGFTAKDQQSQRKTCYAQQSQVRKIRARMTDIITNEVSGADLKQLVNKLAL 88
Query: 191 DSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFEISKLMXXXXXXXXXXXXXXXDKS--- 361
DSIAKDIEK+C IYPL DV IRKVKVLK+PRF++SKL+
Sbjct: 89 DSIAKDIEKSCQRIYPLHDVYIRKVKVLKKPRFDVSKLLELHGDGGGKSVEAVVSSEGAV 148
Query: 362 -ERPEGYEPPVQESV 403
+RPEGYEPPVQE+V
Sbjct: 149 IDRPEGYEPPVQEAV 163
>AE014135-5|AAN06541.1| 218|Drosophila melanogaster CG2168-PB,
isoform B protein.
Length = 218
Score = 163 bits (396), Expect = 8e-41
Identities = 80/135 (59%), Positives = 98/135 (72%), Gaps = 4/135 (2%)
Frame = +2
Query: 11 DGYVLRVFCIGFTNKDTLSQRKTCYAQHTQVRAIRKKMCEIITRDVTSSELREVVNKLIP 190
DGY+LRVFCIGFT KD SQRKTCYAQ +QVR IR +M +IIT +V+ ++L+++VNKL
Sbjct: 84 DGYLLRVFCIGFTAKDQQSQRKTCYAQQSQVRKIRARMTDIITNEVSGADLKQLVNKLAL 143
Query: 191 DSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFEISKLMXXXXXXXXXXXXXXXDKS--- 361
DSIAKDIEK+C IYPL DV IRKVKVLK+PRF++SKL+
Sbjct: 144 DSIAKDIEKSCQRIYPLHDVYIRKVKVLKKPRFDVSKLLELHGDGGGKSVEAVVSSEGAV 203
Query: 362 -ERPEGYEPPVQESV 403
+RPEGYEPPVQE+V
Sbjct: 204 IDRPEGYEPPVQEAV 218
>AE014135-4|AAF59372.1| 268|Drosophila melanogaster CG2168-PA,
isoform A protein.
Length = 268
Score = 163 bits (396), Expect = 8e-41
Identities = 80/135 (59%), Positives = 98/135 (72%), Gaps = 4/135 (2%)
Frame = +2
Query: 11 DGYVLRVFCIGFTNKDTLSQRKTCYAQHTQVRAIRKKMCEIITRDVTSSELREVVNKLIP 190
DGY+LRVFCIGFT KD SQRKTCYAQ +QVR IR +M +IIT +V+ ++L+++VNKL
Sbjct: 134 DGYLLRVFCIGFTAKDQQSQRKTCYAQQSQVRKIRARMTDIITNEVSGADLKQLVNKLAL 193
Query: 191 DSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFEISKLMXXXXXXXXXXXXXXXDKS--- 361
DSIAKDIEK+C IYPL DV IRKVKVLK+PRF++SKL+
Sbjct: 194 DSIAKDIEKSCQRIYPLHDVYIRKVKVLKKPRFDVSKLLELHGDGGGKSVEAVVSSEGAV 253
Query: 362 -ERPEGYEPPVQESV 403
+RPEGYEPPVQE+V
Sbjct: 254 IDRPEGYEPPVQEAV 268
>Y10115-1|CAA71201.1| 270|Drosophila melanogaster ribosomal protein
S3a protein.
Length = 270
Score = 145 bits (352), Expect = 2e-35
Identities = 75/136 (55%), Positives = 93/136 (68%), Gaps = 5/136 (3%)
Frame = +2
Query: 11 DGYVLRVFCIGFTNKDTLSQRKTCYAQHTQVRAIRK-KMCEIITRDVTSSELREVVNKLI 187
DGY+LRVFCIGFT KD SQRKTCYA +QVR IR +M +IIT +V+ ++L+++VNKL
Sbjct: 135 DGYLLRVFCIGFTAKDQQSQRKTCYAHESQVRKIRSGRMTDIITNEVSGADLKQLVNKLA 194
Query: 188 PDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFEISKLMXXXXXXXXXXXXXXXDKSER 367
DSIAKDIEK+C IYPL DV IRKVKVLK+PRF++SKL+
Sbjct: 195 LDSIAKDIEKSCQRIYPLHDVYIRKVKVLKKPRFDVSKLLELHGDGGGKSVEAVVSSEGA 254
Query: 368 PEG----YEPPVQESV 403
P+ +PPVQESV
Sbjct: 255 PKSTALKVKPPVQESV 270
>AY070949-1|AAL48571.1| 217|Drosophila melanogaster RE04220p
protein.
Length = 217
Score = 79.4 bits (187), Expect = 2e-15
Identities = 34/55 (61%), Positives = 46/55 (83%)
Frame = +2
Query: 11 DGYVLRVFCIGFTNKDTLSQRKTCYAQHTQVRAIRKKMCEIITRDVTSSELREVV 175
DGY+LRVFCIGFT KD SQRKTCYAQ +QVR IR +M +IIT +V+ ++L++++
Sbjct: 134 DGYLLRVFCIGFTAKDQQSQRKTCYAQQSQVRKIRARMTDIITNEVSGADLKQLL 188
>AE013599-2921|AAF57537.1| 632|Drosophila melanogaster CG15904-PA
protein.
Length = 632
Score = 31.9 bits (69), Expect = 0.34
Identities = 15/50 (30%), Positives = 26/50 (52%)
Frame = -2
Query: 256 NADITKWVDTVTRLFDILSDGVRNQLVHDFTKL*TGHIARDDFTHFFPDC 107
+A++T +T L D++S GV L+H FT++ T + + DC
Sbjct: 265 SANVTADYLNMTNLLDLVSQGVYETLIHSFTEITTKFVVSYSYPIGINDC 314
>M26400-1|AAA28907.1| 2415|Drosophila melanogaster protein (
D.melanogaster alpha-spectrin mRNA, complete cds. ).
Length = 2415
Score = 27.5 bits (58), Expect = 7.3
Identities = 22/60 (36%), Positives = 24/60 (40%)
Frame = +2
Query: 2 HEADGYVLRVFCIGFTNKDTLSQRKTCYAQHTQVRAIRKKMCEIITRDVTSSELREVVNK 181
HEA L F G T + Q K C Q T V I K C + D T REV K
Sbjct: 935 HEALVSDLEAF--GNTIQALQEQAKNCRQQETPVVDITGKECVVALYDYTEKSPREVSMK 992
>BT023889-1|ABA81823.1| 1557|Drosophila melanogaster RE03775p protein.
Length = 1557
Score = 27.5 bits (58), Expect = 7.3
Identities = 22/60 (36%), Positives = 24/60 (40%)
Frame = +2
Query: 2 HEADGYVLRVFCIGFTNKDTLSQRKTCYAQHTQVRAIRKKMCEIITRDVTSSELREVVNK 181
HEA L F G T + Q K C Q T V I K C + D T REV K
Sbjct: 935 HEALVSDLEAF--GNTIQALQEQAKNCRQQETPVVDITGKECVVALYDYTEKSPREVSMK 992
>BT016127-1|AAV37012.1| 367|Drosophila melanogaster GH23568p
protein.
Length = 367
Score = 27.5 bits (58), Expect = 7.3
Identities = 14/35 (40%), Positives = 18/35 (51%)
Frame = -2
Query: 301 LGDFKTRPLQYFHLPNADITKWVDTVTRLFDILSD 197
LG F PL FHL D+ + V V FD++ D
Sbjct: 298 LGGFFV-PLHEFHLTPQDVDQMVSNVAFAFDLMQD 331
>AE014298-2933|AAF49016.2| 367|Drosophila melanogaster CG32528-PA
protein.
Length = 367
Score = 27.5 bits (58), Expect = 7.3
Identities = 14/35 (40%), Positives = 18/35 (51%)
Frame = -2
Query: 301 LGDFKTRPLQYFHLPNADITKWVDTVTRLFDILSD 197
LG F PL FHL D+ + V V FD++ D
Sbjct: 298 LGGFFV-PLHEFHLTPQDVDQMVSNVAFAFDLMQD 331
>AE014296-357|AAF47569.1| 2415|Drosophila melanogaster CG1977-PA
protein.
Length = 2415
Score = 27.5 bits (58), Expect = 7.3
Identities = 22/60 (36%), Positives = 24/60 (40%)
Frame = +2
Query: 2 HEADGYVLRVFCIGFTNKDTLSQRKTCYAQHTQVRAIRKKMCEIITRDVTSSELREVVNK 181
HEA L F G T + Q K C Q T V I K C + D T REV K
Sbjct: 935 HEALVSDLEAF--GNTIQALQEQAKNCRQQETPVVDITGKECVVALYDYTEKSPREVSMK 992
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,976,382
Number of Sequences: 53049
Number of extensions: 327097
Number of successful extensions: 956
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 932
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 951
length of database: 24,988,368
effective HSP length: 78
effective length of database: 20,850,546
effective search space used: 1209331668
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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