Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0022_G16
(315 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z92973-6|CAI79258.1| 440|Caenorhabditis elegans Hypothetical pr... 29 0.53
AC006714-6|AAN84810.2| 339|Caenorhabditis elegans Hypothetical ... 29 0.70
AF039710-9|AAB96685.2| 172|Caenorhabditis elegans Hypothetical ... 28 1.6
Z66521-15|CAM33508.2| 262|Caenorhabditis elegans Hypothetical p... 26 5.0
AL032626-2|CAA21539.1| 571|Caenorhabditis elegans Hypothetical ... 26 5.0
U88167-2|AAB42225.3| 908|Caenorhabditis elegans Hypothetical pr... 26 6.6
U64857-9|AAC25863.3| 302|Caenorhabditis elegans Hypothetical pr... 26 6.6
U64857-8|AAM29667.1| 350|Caenorhabditis elegans Hypothetical pr... 26 6.6
AF067218-1|AAC17021.1| 1451|Caenorhabditis elegans Hypothetical ... 26 6.6
Z99942-7|CAB17070.2| 462|Caenorhabditis elegans Hypothetical pr... 25 8.7
Z81564-13|CAB04579.1| 243|Caenorhabditis elegans Hypothetical p... 25 8.7
Z81564-12|CAB04578.1| 263|Caenorhabditis elegans Hypothetical p... 25 8.7
Z81475-11|CAB03915.1| 1820|Caenorhabditis elegans Hypothetical p... 25 8.7
AL032643-9|CAA21664.1| 243|Caenorhabditis elegans Hypothetical ... 25 8.7
AL032643-8|CAA21663.1| 263|Caenorhabditis elegans Hypothetical ... 25 8.7
AL032627-23|CAA21551.1| 1820|Caenorhabditis elegans Hypothetical... 25 8.7
AF025469-2|AAG00033.2| 470|Caenorhabditis elegans Taf (tbp-asso... 25 8.7
AF000263-12|AAO21392.1| 838|Caenorhabditis elegans Hypothetical... 25 8.7
AF000263-11|AAL77184.1| 866|Caenorhabditis elegans Hypothetical... 25 8.7
AF000263-8|AAK21461.1| 924|Caenorhabditis elegans Hypothetical ... 25 8.7
AF000263-7|AAK21463.1| 925|Caenorhabditis elegans Hypothetical ... 25 8.7
>Z92973-6|CAI79258.1| 440|Caenorhabditis elegans Hypothetical
protein Y6G8.5 protein.
Length = 440
Score = 29.5 bits (63), Expect = 0.53
Identities = 25/79 (31%), Positives = 37/79 (46%), Gaps = 4/79 (5%)
Frame = +3
Query: 18 YHNTSARSPFLI*KMLIFISIAVLLVGGE---AKFYKDCGSQLATVQTVMVTGCSQDARE 188
++N + L +L F SI +L+ G E +F+ CG Q + + TG DA E
Sbjct: 277 FNNFPSSKMHLFLNILAFASIGLLVNGEEWCMTQFF--CGYQHSVITYPFFTGKVADADE 334
Query: 189 CVLR-RNSNVSMNIEFTPN 242
C R N+ M+ EF N
Sbjct: 335 CKNRCLNNPACMSSEFRYN 353
>AC006714-6|AAN84810.2| 339|Caenorhabditis elegans Hypothetical
protein Y119D3B.12a protein.
Length = 339
Score = 29.1 bits (62), Expect = 0.70
Identities = 16/51 (31%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Frame = +2
Query: 143 RADCHGDRVQSRR*GVRAAKKQ*RQHEHRIHSESRAHQ-HNHRPPRGDDEQ 292
+A+ R +SR A +K+ + H H SR H+ H HR RG+ +
Sbjct: 255 KAEMKRKRSRSRSTDRGADRKRSTEQHHHSHRSSRDHRDHRHRDHRGEHRE 305
>AF039710-9|AAB96685.2| 172|Caenorhabditis elegans Hypothetical
protein C46E10.8 protein.
Length = 172
Score = 27.9 bits (59), Expect = 1.6
Identities = 11/37 (29%), Positives = 19/37 (51%), Gaps = 2/37 (5%)
Frame = -2
Query: 281 HPVEVCG--YAGELLIRSEFDVHADVTVSSQHALPSV 177
H E+CG Y+ ++ + H + S HA+PS+
Sbjct: 64 HTCEICGAHYSSKIYLNRHMKKHLETADSGAHAIPSL 100
>Z66521-15|CAM33508.2| 262|Caenorhabditis elegans Hypothetical
protein W02B12.13 protein.
Length = 262
Score = 26.2 bits (55), Expect = 5.0
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = +2
Query: 224 HRIHSESRAHQHNHRP 271
H HS+ R+H+H H P
Sbjct: 43 HHEHSQKRSHRHRHLP 58
>AL032626-2|CAA21539.1| 571|Caenorhabditis elegans Hypothetical
protein Y37D8A.2 protein.
Length = 571
Score = 26.2 bits (55), Expect = 5.0
Identities = 18/60 (30%), Positives = 25/60 (41%)
Frame = +2
Query: 74 QYRSTFGRW*SQILQGLWVAVSHRADCHGDRVQSRR*GVRAAKKQ*RQHEHRIHSESRAH 253
Q+ FGR S WV V ++ G VQ G+ +Q H +HS+ AH
Sbjct: 319 QWAEAFGRHNSGTYNNEWVVVDYKQFHRGKEVQPET-GIIHVVEQ--MPGHIVHSDKTAH 375
>U88167-2|AAB42225.3| 908|Caenorhabditis elegans Hypothetical
protein D2092.5 protein.
Length = 908
Score = 25.8 bits (54), Expect = 6.6
Identities = 9/29 (31%), Positives = 18/29 (62%)
Frame = +2
Query: 197 AKKQ*RQHEHRIHSESRAHQHNHRPPRGD 283
++KQ +Q + H + +HQ+NH+ G+
Sbjct: 469 SQKQQKQSNGKSHHQHSSHQNNHQKSNGN 497
>U64857-9|AAC25863.3| 302|Caenorhabditis elegans Hypothetical
protein C37C3.8a protein.
Length = 302
Score = 25.8 bits (54), Expect = 6.6
Identities = 10/28 (35%), Positives = 17/28 (60%)
Frame = +2
Query: 221 EHRIHSESRAHQHNHRPPRGDDEQAHTV 304
+H+I+ E RA +H R D+E H++
Sbjct: 109 DHKINEELRATRHFDLMDRRDEESEHSI 136
>U64857-8|AAM29667.1| 350|Caenorhabditis elegans Hypothetical
protein C37C3.8b protein.
Length = 350
Score = 25.8 bits (54), Expect = 6.6
Identities = 10/28 (35%), Positives = 17/28 (60%)
Frame = +2
Query: 221 EHRIHSESRAHQHNHRPPRGDDEQAHTV 304
+H+I+ E RA +H R D+E H++
Sbjct: 157 DHKINEELRATRHFDLMDRRDEESEHSI 184
>AF067218-1|AAC17021.1| 1451|Caenorhabditis elegans Hypothetical
protein K10E9.1 protein.
Length = 1451
Score = 25.8 bits (54), Expect = 6.6
Identities = 16/45 (35%), Positives = 25/45 (55%), Gaps = 3/45 (6%)
Frame = -3
Query: 304 NGMGLFIITPWRSVVMLVSS*FGVNSMFMLTLLFLR---STHSLA 179
+ +GL +I + + + S FGV F L+ LFL+ +THS A
Sbjct: 1061 DSIGLNVIARYERLNIETHSEFGVKWFFKLSRLFLKHGFTTHSFA 1105
>Z99942-7|CAB17070.2| 462|Caenorhabditis elegans Hypothetical
protein H13N06.5 protein.
Length = 462
Score = 25.4 bits (53), Expect = 8.7
Identities = 15/57 (26%), Positives = 23/57 (40%), Gaps = 3/57 (5%)
Frame = +2
Query: 137 SHRAD--CHGDRVQSRR*GVRAAKKQ*RQHEH-RIHSESRAHQHNHRPPRGDDEQAH 298
+H AD C + + AA H+H H+ H H+H D+E+ H
Sbjct: 53 AHDADGGCPYAKAAAAEAATAAAHDHGHAHDHDHGHAHDHGHAHDHHGHSHDEEEDH 109
>Z81564-13|CAB04579.1| 243|Caenorhabditis elegans Hypothetical
protein Y54E5A.8b protein.
Length = 243
Score = 25.4 bits (53), Expect = 8.7
Identities = 7/21 (33%), Positives = 14/21 (66%)
Frame = +1
Query: 82 QYFWSVVKPNFTRIVGRS*PP 144
+++W V+P +R++ S PP
Sbjct: 89 EFYWKAVEPGGSRVISASLPP 109
>Z81564-12|CAB04578.1| 263|Caenorhabditis elegans Hypothetical
protein Y54E5A.8a protein.
Length = 263
Score = 25.4 bits (53), Expect = 8.7
Identities = 7/21 (33%), Positives = 14/21 (66%)
Frame = +1
Query: 82 QYFWSVVKPNFTRIVGRS*PP 144
+++W V+P +R++ S PP
Sbjct: 109 EFYWKAVEPGGSRVISASLPP 129
>Z81475-11|CAB03915.1| 1820|Caenorhabditis elegans Hypothetical
protein C24H11.7 protein.
Length = 1820
Score = 25.4 bits (53), Expect = 8.7
Identities = 13/38 (34%), Positives = 17/38 (44%)
Frame = +3
Query: 138 ATVQTVMVTGCSQDARECVLRRNSNVSMNIEFTPNQEL 251
A V T + G S + EC+ RNS +N Q L
Sbjct: 117 AVVHTKFIGGKSTGSDECLFLRNSRKKVNFHKKSTQNL 154
>AL032643-9|CAA21664.1| 243|Caenorhabditis elegans Hypothetical
protein Y54E5A.8b protein.
Length = 243
Score = 25.4 bits (53), Expect = 8.7
Identities = 7/21 (33%), Positives = 14/21 (66%)
Frame = +1
Query: 82 QYFWSVVKPNFTRIVGRS*PP 144
+++W V+P +R++ S PP
Sbjct: 89 EFYWKAVEPGGSRVISASLPP 109
>AL032643-8|CAA21663.1| 263|Caenorhabditis elegans Hypothetical
protein Y54E5A.8a protein.
Length = 263
Score = 25.4 bits (53), Expect = 8.7
Identities = 7/21 (33%), Positives = 14/21 (66%)
Frame = +1
Query: 82 QYFWSVVKPNFTRIVGRS*PP 144
+++W V+P +R++ S PP
Sbjct: 109 EFYWKAVEPGGSRVISASLPP 129
>AL032627-23|CAA21551.1| 1820|Caenorhabditis elegans Hypothetical
protein C24H11.7 protein.
Length = 1820
Score = 25.4 bits (53), Expect = 8.7
Identities = 13/38 (34%), Positives = 17/38 (44%)
Frame = +3
Query: 138 ATVQTVMVTGCSQDARECVLRRNSNVSMNIEFTPNQEL 251
A V T + G S + EC+ RNS +N Q L
Sbjct: 117 AVVHTKFIGGKSTGSDECLFLRNSRKKVNFHKKSTQNL 154
>AF025469-2|AAG00033.2| 470|Caenorhabditis elegans Taf
(tbp-associated transcriptionfactor) family protein 6.1
protein.
Length = 470
Score = 25.4 bits (53), Expect = 8.7
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = -2
Query: 260 YAGELLIRSEFDVHADVTVSSQHALPSVLT 171
YAG +L + D+TV+ H LP++L+
Sbjct: 291 YAGRVLRSLSHNKACDMTVTLHHVLPALLS 320
>AF000263-12|AAO21392.1| 838|Caenorhabditis elegans Hypothetical
protein T08B2.5f protein.
Length = 838
Score = 25.4 bits (53), Expect = 8.7
Identities = 15/59 (25%), Positives = 22/59 (37%)
Frame = +2
Query: 137 SHRADCHGDRVQSRR*GVRAAKKQ*RQHEHRIHSESRAHQHNHRPPRGDDEQAHTVSSS 313
S D G R +SR R + R R+H + PP + +H SS+
Sbjct: 35 SRSRDRRGGRSRSRSPSRRRTSRDRRDDRSSRRRRDRSHSRSRSPPSSANGSSHWSSSN 93
>AF000263-11|AAL77184.1| 866|Caenorhabditis elegans Hypothetical
protein T08B2.5c protein.
Length = 866
Score = 25.4 bits (53), Expect = 8.7
Identities = 15/59 (25%), Positives = 22/59 (37%)
Frame = +2
Query: 137 SHRADCHGDRVQSRR*GVRAAKKQ*RQHEHRIHSESRAHQHNHRPPRGDDEQAHTVSSS 313
S D G R +SR R + R R+H + PP + +H SS+
Sbjct: 63 SRSRDRRGGRSRSRSPSRRRTSRDRRDDRSSRRRRDRSHSRSRSPPSSANGSSHWSSSN 121
>AF000263-8|AAK21461.1| 924|Caenorhabditis elegans Hypothetical
protein T08B2.5a protein.
Length = 924
Score = 25.4 bits (53), Expect = 8.7
Identities = 15/59 (25%), Positives = 22/59 (37%)
Frame = +2
Query: 137 SHRADCHGDRVQSRR*GVRAAKKQ*RQHEHRIHSESRAHQHNHRPPRGDDEQAHTVSSS 313
S D G R +SR R + R R+H + PP + +H SS+
Sbjct: 121 SRSRDRRGGRSRSRSPSRRRTSRDRRDDRSSRRRRDRSHSRSRSPPSSANGSSHWSSSN 179
>AF000263-7|AAK21463.1| 925|Caenorhabditis elegans Hypothetical
protein T08B2.5b protein.
Length = 925
Score = 25.4 bits (53), Expect = 8.7
Identities = 15/59 (25%), Positives = 22/59 (37%)
Frame = +2
Query: 137 SHRADCHGDRVQSRR*GVRAAKKQ*RQHEHRIHSESRAHQHNHRPPRGDDEQAHTVSSS 313
S D G R +SR R + R R+H + PP + +H SS+
Sbjct: 122 SRSRDRRGGRSRSRSPSRRRTSRDRRDDRSSRRRRDRSHSRSRSPPSSANGSSHWSSSN 180
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,484,456
Number of Sequences: 27780
Number of extensions: 140258
Number of successful extensions: 449
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 419
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 448
length of database: 12,740,198
effective HSP length: 71
effective length of database: 10,767,818
effective search space used: 355337994
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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