Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0022_G10
(247 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC959.09c |apc5|SPAP32A8.01c|anaphase-promoting complex subuni... 26 0.60
SPAC17A5.06 |ptr8||transcription factor TFIIH complex ERCC-3 sub... 25 1.8
SPBC713.02c |ubp21|ubpD, ubp15|ubiquitin C-terminal hydrolase Ub... 24 2.4
SPAC23G3.03 |sib2||ornithine N5 monooxygenase |Schizosaccharomyc... 24 2.4
SPBC9B6.09c |mdl1||mitochondrial peptide-transporting ATPase|Sch... 24 2.4
SPAC19A8.08 |upf2||nonsense-mediated decay protein Upf2|Schizosa... 24 3.2
SPBC409.11 |meu18||sequence orphan|Schizosaccharomyces pombe|chr... 24 3.2
SPAC23G3.02c |sib1||ferrichrome synthetase Sib1|Schizosaccharomy... 24 3.2
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 24 3.2
SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual 24 3.2
SPAC2E1P3.04 |||copper amine oxidase |Schizosaccharomyces pombe|... 23 4.3
SPBC14F5.03c |kap123||karyopherin Kap123|Schizosaccharomyces pom... 23 4.3
SPBC17D11.06 |spp2|pri2|DNA primase large subunit Spp2 |Schizosa... 23 4.3
SPBC1718.03 |ker1||DNA-directed RNA polymerase I complex subunit... 23 5.6
SPAC22E12.17c |glo3||ARF GTPase activating protein|Schizosacchar... 23 5.6
SPCC553.01c ||SPCC736.01c|meiotic chromosome segregation protein... 23 7.4
SPAC6B12.14c |||conserved fungal protein|Schizosaccharomyces pom... 23 7.4
SPBC18H10.16 |||amino acid permease, unknown 9|Schizosaccharomyc... 23 7.4
SPCC70.05c |||serine/threonine protein kinase |Schizosaccharomyc... 23 7.4
SPAC5H10.01 |||DUF1445 family protein|Schizosaccharomyces pombe|... 22 9.8
SPAC167.06c |mug143|SPAC57A7.02c|sequence orphan|Schizosaccharom... 22 9.8
SPCC1682.15 |mug122||PX/PXA domain protein|Schizosaccharomyces p... 22 9.8
SPBC106.14c |sda1||SDA1 family protein|Schizosaccharomyces pombe... 22 9.8
>SPAC959.09c |apc5|SPAP32A8.01c|anaphase-promoting complex subunit
Apc5 |Schizosaccharomyces pombe|chr 1|||Manual
Length = 737
Score = 26.2 bits (55), Expect = 0.60
Identities = 19/66 (28%), Positives = 33/66 (50%), Gaps = 8/66 (12%)
Frame = +2
Query: 2 HEAAAVSEFEPW--LIEKLRSLKTDEGV------FGSYISGILDSEDNADDKKDALEGIL 157
H +++ E+ + L E+L SL + E + G+YI G+ DSE+ A + +L
Sbjct: 78 HLPSSIEEYSVYSLLHERLWSLHSFEDIHEIFISLGNYIEGVYDSEEEAPHMLFSSSSLL 137
Query: 158 SEIVEK 175
S + K
Sbjct: 138 SIFLRK 143
>SPAC17A5.06 |ptr8||transcription factor TFIIH complex ERCC-3
subunit|Schizosaccharomyces pombe|chr 1|||Manual
Length = 804
Score = 24.6 bits (51), Expect = 1.8
Identities = 11/25 (44%), Positives = 13/25 (52%)
Frame = +2
Query: 110 SEDNADDKKDALEGILSEIVEKDIS 184
+EDN +DKKD E EK S
Sbjct: 231 NEDNVEDKKDITNDSSKETAEKSSS 255
>SPBC713.02c |ubp21|ubpD, ubp15|ubiquitin C-terminal hydrolase
Ubp21|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1129
Score = 24.2 bits (50), Expect = 2.4
Identities = 9/27 (33%), Positives = 16/27 (59%)
Frame = +2
Query: 131 KKDALEGILSEIVEKDISMHVEEILEK 211
+K L+ ILS + +D+ HV L++
Sbjct: 544 RKSRLDHILSPVTAEDVPFHVRNTLDE 570
>SPAC23G3.03 |sib2||ornithine N5 monooxygenase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 431
Score = 24.2 bits (50), Expect = 2.4
Identities = 9/29 (31%), Positives = 17/29 (58%)
Frame = -2
Query: 102 IPEM*LPKTPSSVFNDLNFSINHGSNSLT 16
+ ++ P+ P+S F LN+ +HG L+
Sbjct: 63 VKDLATPRDPTSYFTFLNYLHSHGQERLS 91
>SPBC9B6.09c |mdl1||mitochondrial peptide-transporting
ATPase|Schizosaccharomyces pombe|chr 2|||Manual
Length = 726
Score = 24.2 bits (50), Expect = 2.4
Identities = 12/28 (42%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
Frame = -2
Query: 84 PKTPS-SVFNDLNFSINHGSNSLTAAAS 4
P PS S+F++L+F I+ G+N A S
Sbjct: 492 PTRPSASIFDNLSFDIHPGTNVAIVAPS 519
>SPAC19A8.08 |upf2||nonsense-mediated decay protein
Upf2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1049
Score = 23.8 bits (49), Expect = 3.2
Identities = 15/38 (39%), Positives = 19/38 (50%)
Frame = +2
Query: 62 KTDEGVFGSYISGILDSEDNADDKKDALEGILSEIVEK 175
+TDE G S +LDSED D + L L E E+
Sbjct: 915 ETDEESSGLEESDLLDSEDEDIDNEMQLSRELDEEFER 952
>SPBC409.11 |meu18||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 553
Score = 23.8 bits (49), Expect = 3.2
Identities = 17/52 (32%), Positives = 27/52 (51%)
Frame = +2
Query: 44 EKLRSLKTDEGVFGSYISGILDSEDNADDKKDALEGILSEIVEKDISMHVEE 199
E + L+ +EG Y SG+ + N DD A E I +EK +S++ E+
Sbjct: 356 EFIHELRENEGPSVLYDSGLDQNGTNYDDAFAAPEAI---SIEKYVSINEED 404
>SPAC23G3.02c |sib1||ferrichrome synthetase Sib1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 4924
Score = 23.8 bits (49), Expect = 3.2
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = +2
Query: 59 LKTDEGVFGSYISGILDSEDNADD 130
+K ++ VFG Y+SG DN D+
Sbjct: 4753 VKQEDVVFGIYVSGRTLDVDNIDE 4776
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 23.8 bits (49), Expect = 3.2
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = -2
Query: 87 LPKTPSSVFNDLNFSINHGSN 25
LPKTPS F D F SN
Sbjct: 772 LPKTPSGEFGDNEFMFPKKSN 792
>SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1236
Score = 23.8 bits (49), Expect = 3.2
Identities = 21/78 (26%), Positives = 34/78 (43%)
Frame = -2
Query: 240 SSSFGRHNSHFSSISSTCIEMSFSTISDNIPXXXXXXXXXXXXXXKIPEM*LPKTPSSVF 61
SSS +S SISS+ +FS+ S + P P P T S +
Sbjct: 581 SSSTSSPSSTSLSISSSSTSSTFSSASTSSPSSISSSISSSSTILSSP---TPSTSSLMI 637
Query: 60 NDLNFSINHGSNSLTAAA 7
+ + SI GS+S+ +++
Sbjct: 638 S--SSSIISGSSSILSSS 653
>SPAC2E1P3.04 |||copper amine oxidase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 712
Score = 23.4 bits (48), Expect = 4.3
Identities = 18/81 (22%), Positives = 31/81 (38%)
Frame = +2
Query: 2 HEAAAVSEFEPWLIEKLRSLKTDEGVFGSYISGILDSEDNADDKKDALEGILSEIVEKDI 181
H+ P L S+ +GV G G S++N E + + V++ I
Sbjct: 458 HQHLFCLRLNPMLDGYSNSVAVVDGVSGPGEPG---SKENYYGNAFTTERTVPKTVKEAI 514
Query: 182 SMHVEEILEKWELCRPNDEEP 244
+ + W++C PN P
Sbjct: 515 CDYNSDTSRTWDICNPNKLHP 535
>SPBC14F5.03c |kap123||karyopherin Kap123|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1067
Score = 23.4 bits (48), Expect = 4.3
Identities = 12/45 (26%), Positives = 21/45 (46%)
Frame = +2
Query: 77 VFGSYISGILDSEDNADDKKDALEGILSEIVEKDISMHVEEILEK 211
VF +++ + DSE G+L + +D+S IL+K
Sbjct: 895 VFSLFMAALEDSEGEVRSNAAYSMGLLCQFSTEDLSSEYLNILQK 939
>SPBC17D11.06 |spp2|pri2|DNA primase large subunit Spp2
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 459
Score = 23.4 bits (48), Expect = 4.3
Identities = 15/58 (25%), Positives = 29/58 (50%)
Frame = +2
Query: 14 AVSEFEPWLIEKLRSLKTDEGVFGSYISGILDSEDNADDKKDALEGILSEIVEKDISM 187
++ EFE W I++L + G ++S + K+ L GI+ +I++K + M
Sbjct: 42 SIEEFETWAIDRL------------VVLGEIESAMLRNKTKNELNGIIKKILDKRLPM 87
>SPBC1718.03 |ker1||DNA-directed RNA polymerase I complex subunit
subunit Ker1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 147
Score = 23.0 bits (47), Expect = 5.6
Identities = 14/61 (22%), Positives = 31/61 (50%)
Frame = +2
Query: 20 SEFEPWLIEKLRSLKTDEGVFGSYISGILDSEDNADDKKDALEGILSEIVEKDISMHVEE 199
+E P +I + +S K D+ +++ + + + D+K E +LS++ + + EE
Sbjct: 3 TECPPKMILR-KSEKLDKDASSKFLNRYIQTIERFQDEKSGSESVLSQLNRVLMYLKGEE 61
Query: 200 I 202
I
Sbjct: 62 I 62
>SPAC22E12.17c |glo3||ARF GTPase activating
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 486
Score = 23.0 bits (47), Expect = 5.6
Identities = 12/36 (33%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Frame = +2
Query: 68 DEGVFGSYI-SGILDSEDNADDKKDALEGILSEIVE 172
D+ F ++ + + S+DN DDK D S +VE
Sbjct: 158 DDDFFSAWDKASVKKSDDNLDDKTDLASTSSSVVVE 193
>SPCC553.01c ||SPCC736.01c|meiotic chromosome segregation
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 715
Score = 22.6 bits (46), Expect = 7.4
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = -2
Query: 240 SSSFGRHNSHFSSISSTCIEMSFSTISDNI 151
SSSFGR +SH + S E++ S+ S +I
Sbjct: 463 SSSFGRSHSHLGT-SLRSNELNGSSASSSI 491
>SPAC6B12.14c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 154
Score = 22.6 bits (46), Expect = 7.4
Identities = 10/36 (27%), Positives = 18/36 (50%)
Frame = +2
Query: 11 AAVSEFEPWLIEKLRSLKTDEGVFGSYISGILDSED 118
A++ + +EKL S D V + + +L +ED
Sbjct: 69 ASIDFISQYCLEKLASSDNDSSVHNHHDNSVLRNED 104
>SPBC18H10.16 |||amino acid permease, unknown 9|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1050
Score = 22.6 bits (46), Expect = 7.4
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = +2
Query: 32 PWLIEKLRSLKTDEGVFGSYISGILDS 112
PW+I + LKT +F SY GI S
Sbjct: 101 PWIIGEAGVLKTLLMLFISYAVGIFTS 127
>SPCC70.05c |||serine/threonine protein kinase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 781
Score = 22.6 bits (46), Expect = 7.4
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = +3
Query: 171 KKTFLCMLKKY*RNGNYV 224
KK F CM+K+ R NY+
Sbjct: 558 KKDFECMIKQILRGLNYI 575
>SPAC5H10.01 |||DUF1445 family protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 301
Score = 22.2 bits (45), Expect = 9.8
Identities = 11/37 (29%), Positives = 18/37 (48%)
Frame = +2
Query: 5 EAAAVSEFEPWLIEKLRSLKTDEGVFGSYISGILDSE 115
E +EF+P + K ++ TD + YI+G E
Sbjct: 102 EIGKPTEFKPEALAKQSNVATDIPFYCEYINGKFSRE 138
>SPAC167.06c |mug143|SPAC57A7.02c|sequence
orphan|Schizosaccharomyces pombe|chr 1|||Manual
Length = 121
Score = 22.2 bits (45), Expect = 9.8
Identities = 12/41 (29%), Positives = 21/41 (51%)
Frame = +2
Query: 83 GSYISGILDSEDNADDKKDALEGILSEIVEKDISMHVEEIL 205
G+ L S D +DK ++L G + ++ + VEE+L
Sbjct: 47 GTAEESALPSVDEEEDKLNSLLGNIKVRTAQEDGVSVEEVL 87
>SPCC1682.15 |mug122||PX/PXA domain protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 749
Score = 22.2 bits (45), Expect = 9.8
Identities = 14/29 (48%), Positives = 15/29 (51%), Gaps = 1/29 (3%)
Frame = +3
Query: 141 PWKVYYRR*WKKTFLCMLKKY-*RNGNYV 224
PW VY R KT +LKK RNG V
Sbjct: 346 PWVVYRRYRGFKTLYYLLKKQSARNGRAV 374
>SPBC106.14c |sda1||SDA1 family protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 719
Score = 22.2 bits (45), Expect = 9.8
Identities = 8/20 (40%), Positives = 13/20 (65%)
Frame = +2
Query: 155 LSEIVEKDISMHVEEILEKW 214
L +V+KD + EE L++W
Sbjct: 17 LQHLVKKDPKSYREEFLQQW 36
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 930,041
Number of Sequences: 5004
Number of extensions: 15233
Number of successful extensions: 60
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 59
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 60
length of database: 2,362,478
effective HSP length: 60
effective length of database: 2,062,238
effective search space used: 43306998
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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