Samia BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0022_G08
         (259 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A7LAW3 Cluster: ArgF; n=4; Bacteria|Rep: ArgF - Brachys...    33   0.95 
UniRef50_A5I6C8 Cluster: Putative exported protein precursor; n=...    32   2.2  
UniRef50_Q57ZA6 Cluster: Putative uncharacterized protein; n=1; ...    31   3.8  
UniRef50_A2E3E7 Cluster: Putative uncharacterized protein; n=1; ...    31   3.8  
UniRef50_Q89JZ8 Cluster: Major facilitator superfamily transport...    31   5.1  
UniRef50_A3CDQ7 Cluster: Putative uncharacterized protein; n=1; ...    31   6.7  
UniRef50_Q4N8B5 Cluster: Putative uncharacterized protein; n=1; ...    31   6.7  
UniRef50_Q6CGP0 Cluster: Yarrowia lipolytica chromosome A of str...    31   6.7  
UniRef50_A7J823 Cluster: Putative uncharacterized protein n669L;...    30   8.9  
UniRef50_Q9U5D6 Cluster: Vitellogenin-3 precursor; n=1; Plautia ...    30   8.9  

>UniRef50_A7LAW3 Cluster: ArgF; n=4; Bacteria|Rep: ArgF -
           Brachyspira pilosicoli
          Length = 397

 Score = 33.5 bits (73), Expect = 0.95
 Identities = 22/61 (36%), Positives = 32/61 (52%), Gaps = 3/61 (4%)
 Frame = +1

Query: 64  QSPKNEEYCNHRRKKTATTEGKKLFMVCWPNDCTAAVSC---EVYGSVEERKIAYLEKKT 234
           Q+ K++++C    K   T +GK L++ C P D    VSC   EV  SV +R    L K+ 
Sbjct: 302 QNAKHKDWCCTEEKMKKTKDGKALYLHCLPADIN-DVSCKDGEVAASVFDRYRVPLYKQA 360

Query: 235 S 237
           S
Sbjct: 361 S 361


>UniRef50_A5I6C8 Cluster: Putative exported protein precursor; n=4;
           Clostridium botulinum|Rep: Putative exported protein
           precursor - Clostridium botulinum A str. ATCC 3502
          Length = 483

 Score = 32.3 bits (70), Expect = 2.2
 Identities = 17/42 (40%), Positives = 23/42 (54%)
 Frame = +2

Query: 17  KEDY*ACGRSWKKEDCNRRRMKNTATTEERRLQPPKEKNYLW 142
           K  Y A G S  +   N+  + NT T E+  L PPK K+YL+
Sbjct: 177 KSSYYAKGFSAGRNKYNKENLSNTTTNEKSDL-PPKSKDYLY 217


>UniRef50_Q57ZA6 Cluster: Putative uncharacterized protein; n=1;
           Trypanosoma brucei|Rep: Putative uncharacterized protein
           - Trypanosoma brucei
          Length = 1572

 Score = 31.5 bits (68), Expect = 3.8
 Identities = 16/38 (42%), Positives = 23/38 (60%), Gaps = 2/38 (5%)
 Frame = +2

Query: 74  RMKNTATTEERRLQPPKEKNYLWCV--GQMIVLLQFLV 181
           R++NT TT+  R+QPP  + Y W V  G++     FLV
Sbjct: 197 RLQNTPTTDMPRMQPPLLRVYSWLVRTGKVAEASHFLV 234


>UniRef50_A2E3E7 Cluster: Putative uncharacterized protein; n=1;
            Trichomonas vaginalis G3|Rep: Putative uncharacterized
            protein - Trichomonas vaginalis G3
          Length = 1417

 Score = 31.5 bits (68), Expect = 3.8
 Identities = 14/32 (43%), Positives = 17/32 (53%)
 Frame = +1

Query: 64   QSPKNEEYCNHRRKKTATTEGKKLFMVCWPND 159
            +S  NE+YC H  K  A + GK  F  C P D
Sbjct: 1020 ESSSNEDYCRHLFKVVACSCGKVNFFDCSPTD 1051


>UniRef50_Q89JZ8 Cluster: Major facilitator superfamily transporter;
           n=4; Proteobacteria|Rep: Major facilitator superfamily
           transporter - Bradyrhizobium japonicum
          Length = 410

 Score = 31.1 bits (67), Expect = 5.1
 Identities = 16/35 (45%), Positives = 23/35 (65%), Gaps = 1/35 (2%)
 Frame = -1

Query: 121 RWLQSSFFGGCSILHSSAIAVFF-LPASSASLIVF 20
           RW + +  GG  IL S A+A +F LPA+S S ++F
Sbjct: 281 RWNKLALLGGIYILRSLALAWYFMLPATSFSTLLF 315


>UniRef50_A3CDQ7 Cluster: Putative uncharacterized protein; n=1;
           Oryza sativa (japonica cultivar-group)|Rep: Putative
           uncharacterized protein - Oryza sativa subsp. japonica
           (Rice)
          Length = 520

 Score = 30.7 bits (66), Expect = 6.7
 Identities = 13/46 (28%), Positives = 22/46 (47%)
 Frame = +2

Query: 5   EGWKKEDY*ACGRSWKKEDCNRRRMKNTATTEERRLQPPKEKNYLW 142
           E WK++    C    K+E+C+++  KNT   +E   +  K     W
Sbjct: 389 EEWKEKKTEECVEEEKREECDQQERKNTEEDKEESEEDGKTTKQRW 434


>UniRef50_Q4N8B5 Cluster: Putative uncharacterized protein; n=1;
           Theileria parva|Rep: Putative uncharacterized protein -
           Theileria parva
          Length = 713

 Score = 30.7 bits (66), Expect = 6.7
 Identities = 21/60 (35%), Positives = 28/60 (46%)
 Frame = -3

Query: 185 TSQETAAVQSFGQHTINNFFPSVVAVFFLRWLQYSSFFGDCSLLSSSFFRKLNSLLSSNP 6
           TS  T  +  +G   +N     V  + FL+   +SS    C LLSS + RKL    S NP
Sbjct: 498 TSTVTEVINVYGGIKVNITNEDVRIIEFLK--SWSSKLNPCQLLSSEYLRKLTD-ASENP 554


>UniRef50_Q6CGP0 Cluster: Yarrowia lipolytica chromosome A of strain
           CLIB122 of Yarrowia lipolytica; n=2; Yarrowia
           lipolytica|Rep: Yarrowia lipolytica chromosome A of
           strain CLIB122 of Yarrowia lipolytica - Yarrowia
           lipolytica (Candida lipolytica)
          Length = 515

 Score = 30.7 bits (66), Expect = 6.7
 Identities = 19/44 (43%), Positives = 26/44 (59%)
 Frame = -3

Query: 143 TINNFFPSVVAVFFLRWLQYSSFFGDCSLLSSSFFRKLNSLLSS 12
           T+NNF   VV  FFL +++   F G   LLSS + RK  +L +S
Sbjct: 148 TVNNFSGLVVCRFFLGFIEAVYFPGCLFLLSSWYTRKELALRTS 191


>UniRef50_A7J823 Cluster: Putative uncharacterized protein n669L;
           n=2; Paramecium bursaria Chlorella virus A1|Rep:
           Putative uncharacterized protein n669L - Chlorella virus
           FR483
          Length = 92

 Score = 30.3 bits (65), Expect = 8.9
 Identities = 15/34 (44%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
 Frame = -2

Query: 255 YFSSRHACFFFEVSDLSFFDAPV-DFTRNCSSTI 157
           YFS+R   FFF ++   F   PV  FTR C+ T+
Sbjct: 24  YFSARAMYFFFHIAGSFFSGLPVLRFTRLCARTV 57


>UniRef50_Q9U5D6 Cluster: Vitellogenin-3 precursor; n=1; Plautia
            stali|Rep: Vitellogenin-3 precursor - Plautia stali
          Length = 1903

 Score = 30.3 bits (65), Expect = 8.9
 Identities = 14/46 (30%), Positives = 25/46 (54%)
 Frame = +1

Query: 67   SPKNEEYCNHRRKKTATTEGKKLFMVCWPNDCTAAVSCEVYGSVEE 204
            S +N+E C + + + A  +GK  F +      T   +C+ YGS+E+
Sbjct: 1808 SIRNQEGCTNHKIRIAEVDGKTCFSI--KPQVTCNPNCQAYGSLEK 1851


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.315    0.126    0.380 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 236,370,446
Number of Sequences: 1657284
Number of extensions: 3887654
Number of successful extensions: 13261
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 12914
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13245
length of database: 575,637,011
effective HSP length: 63
effective length of database: 471,228,119
effective search space used: 10367018618
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)