Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0022_G08
(259 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U97685-1|AAB58311.1| 986|Drosophila melanogaster replication fa... 28 1.6
L17340-1|AAA28573.1| 986|Drosophila melanogaster transcription ... 28 1.6
BT003618-1|AAO39621.1| 986|Drosophila melanogaster GH06471p pro... 28 1.6
AY122077-1|AAM52589.1| 1008|Drosophila melanogaster AT18625p pro... 28 1.6
AE014297-166|AAF52082.1| 986|Drosophila melanogaster CG1119-PA,... 28 1.6
AE014297-165|AAX52937.1| 1008|Drosophila melanogaster CG1119-PB,... 28 1.6
BT030437-1|ABO52857.1| 566|Drosophila melanogaster IP18510p pro... 27 4.8
BT022527-1|AAY54943.1| 307|Drosophila melanogaster IP07888p pro... 27 4.8
AY058509-1|AAL13738.1| 619|Drosophila melanogaster LD21606p pro... 27 4.8
AE014298-2128|AAF48442.1| 619|Drosophila melanogaster CG9114-PA... 27 4.8
AE014297-633|AAF53999.2| 1148|Drosophila melanogaster CG34127-PA... 27 4.8
AY118524-1|AAM49893.1| 2486|Drosophila melanogaster LD22609p pro... 26 6.3
AE014298-2269|AAF48533.3| 2486|Drosophila melanogaster CG9056-PA... 26 6.3
AF358267-1|AAK40237.1| 939|Drosophila melanogaster sidestep pro... 26 8.4
AE014297-4124|AAF56708.2| 939|Drosophila melanogaster CG31062-P... 26 8.4
AE014296-2787|AAF49424.2| 2224|Drosophila melanogaster CG9695-PA... 26 8.4
>U97685-1|AAB58311.1| 986|Drosophila melanogaster replication
factor C large subunit protein.
Length = 986
Score = 28.3 bits (60), Expect = 1.6
Identities = 15/26 (57%), Positives = 19/26 (73%), Gaps = 1/26 (3%)
Frame = +3
Query: 3 TRVGRK-KTIKLAEEAGRKKTAIAEE 77
T VG+K K + + EEAG KK A+AEE
Sbjct: 269 TVVGKKLKYLVVGEEAGPKKLAVAEE 294
>L17340-1|AAA28573.1| 986|Drosophila melanogaster transcription
factor protein.
Length = 986
Score = 28.3 bits (60), Expect = 1.6
Identities = 15/26 (57%), Positives = 19/26 (73%), Gaps = 1/26 (3%)
Frame = +3
Query: 3 TRVGRK-KTIKLAEEAGRKKTAIAEE 77
T VG+K K + + EEAG KK A+AEE
Sbjct: 269 TVVGKKLKYLVVGEEAGPKKLAVAEE 294
>BT003618-1|AAO39621.1| 986|Drosophila melanogaster GH06471p
protein.
Length = 986
Score = 28.3 bits (60), Expect = 1.6
Identities = 15/26 (57%), Positives = 19/26 (73%), Gaps = 1/26 (3%)
Frame = +3
Query: 3 TRVGRK-KTIKLAEEAGRKKTAIAEE 77
T VG+K K + + EEAG KK A+AEE
Sbjct: 269 TVVGKKLKYLVVGEEAGPKKLAVAEE 294
>AY122077-1|AAM52589.1| 1008|Drosophila melanogaster AT18625p
protein.
Length = 1008
Score = 28.3 bits (60), Expect = 1.6
Identities = 15/26 (57%), Positives = 19/26 (73%), Gaps = 1/26 (3%)
Frame = +3
Query: 3 TRVGRK-KTIKLAEEAGRKKTAIAEE 77
T VG+K K + + EEAG KK A+AEE
Sbjct: 269 TVVGKKLKYLVVGEEAGPKKLAVAEE 294
>AE014297-166|AAF52082.1| 986|Drosophila melanogaster CG1119-PA,
isoform A protein.
Length = 986
Score = 28.3 bits (60), Expect = 1.6
Identities = 15/26 (57%), Positives = 19/26 (73%), Gaps = 1/26 (3%)
Frame = +3
Query: 3 TRVGRK-KTIKLAEEAGRKKTAIAEE 77
T VG+K K + + EEAG KK A+AEE
Sbjct: 269 TVVGKKLKYLVVGEEAGPKKLAVAEE 294
>AE014297-165|AAX52937.1| 1008|Drosophila melanogaster CG1119-PB,
isoform B protein.
Length = 1008
Score = 28.3 bits (60), Expect = 1.6
Identities = 15/26 (57%), Positives = 19/26 (73%), Gaps = 1/26 (3%)
Frame = +3
Query: 3 TRVGRK-KTIKLAEEAGRKKTAIAEE 77
T VG+K K + + EEAG KK A+AEE
Sbjct: 269 TVVGKKLKYLVVGEEAGPKKLAVAEE 294
>BT030437-1|ABO52857.1| 566|Drosophila melanogaster IP18510p
protein.
Length = 566
Score = 26.6 bits (56), Expect = 4.8
Identities = 9/35 (25%), Positives = 19/35 (54%)
Frame = +2
Query: 65 NRRRMKNTATTEERRLQPPKEKNYLWCVGQMIVLL 169
++R++ +A T RR PP + W + ++ L+
Sbjct: 6 SKRQLPPSAATRTRRKVPPTRRRSTWALSSLLALV 40
>BT022527-1|AAY54943.1| 307|Drosophila melanogaster IP07888p
protein.
Length = 307
Score = 26.6 bits (56), Expect = 4.8
Identities = 9/35 (25%), Positives = 19/35 (54%)
Frame = +2
Query: 65 NRRRMKNTATTEERRLQPPKEKNYLWCVGQMIVLL 169
++R++ +A T RR PP + W + ++ L+
Sbjct: 6 SKRQLPPSAATRTRRKVPPTRRRSTWALSSLLALV 40
>AY058509-1|AAL13738.1| 619|Drosophila melanogaster LD21606p
protein.
Length = 619
Score = 26.6 bits (56), Expect = 4.8
Identities = 13/40 (32%), Positives = 20/40 (50%)
Frame = +2
Query: 5 EGWKKEDY*ACGRSWKKEDCNRRRMKNTATTEERRLQPPK 124
+G EDY + W +D + RR+K +ER L P +
Sbjct: 313 DGQPPEDYDQLAQFWACQDQHSRRLKWRPVEKERILPPER 352
>AE014298-2128|AAF48442.1| 619|Drosophila melanogaster CG9114-PA
protein.
Length = 619
Score = 26.6 bits (56), Expect = 4.8
Identities = 13/40 (32%), Positives = 20/40 (50%)
Frame = +2
Query: 5 EGWKKEDY*ACGRSWKKEDCNRRRMKNTATTEERRLQPPK 124
+G EDY + W +D + RR+K +ER L P +
Sbjct: 313 DGQPPEDYDQLAQFWACQDQHSRRLKWRPVEKERILPPER 352
>AE014297-633|AAF53999.2| 1148|Drosophila melanogaster CG34127-PA
protein.
Length = 1148
Score = 26.6 bits (56), Expect = 4.8
Identities = 9/35 (25%), Positives = 19/35 (54%)
Frame = +2
Query: 65 NRRRMKNTATTEERRLQPPKEKNYLWCVGQMIVLL 169
++R++ +A T RR PP + W + ++ L+
Sbjct: 6 SKRQLPPSAATRTRRKVPPTRRRSTWALSSLLALV 40
>AY118524-1|AAM49893.1| 2486|Drosophila melanogaster LD22609p protein.
Length = 2486
Score = 26.2 bits (55), Expect = 6.3
Identities = 23/65 (35%), Positives = 29/65 (44%)
Frame = -3
Query: 200 STLP*TSQETAAVQSFGQHTINNFFPSVVAVFFLRWLQYSSFFGDCSLLSSSFFRKLNSL 21
STL S A ++NF PSV+AV L SS S LSSS +K+ S
Sbjct: 1466 STLYSQSSAAATAPPSAAAAVSNFTPSVLAVQSLTTAVTSS-SSSPSTLSSSVIQKVISP 1524
Query: 20 LSSNP 6
+P
Sbjct: 1525 KGESP 1529
>AE014298-2269|AAF48533.3| 2486|Drosophila melanogaster CG9056-PA
protein.
Length = 2486
Score = 26.2 bits (55), Expect = 6.3
Identities = 23/65 (35%), Positives = 29/65 (44%)
Frame = -3
Query: 200 STLP*TSQETAAVQSFGQHTINNFFPSVVAVFFLRWLQYSSFFGDCSLLSSSFFRKLNSL 21
STL S A ++NF PSV+AV L SS S LSSS +K+ S
Sbjct: 1466 STLYSQSSAAATAPPSAAAAVSNFTPSVLAVQSLTTAVTSS-SSSPSTLSSSVIQKVISP 1524
Query: 20 LSSNP 6
+P
Sbjct: 1525 KGESP 1529
>AF358267-1|AAK40237.1| 939|Drosophila melanogaster sidestep
protein.
Length = 939
Score = 25.8 bits (54), Expect = 8.4
Identities = 18/64 (28%), Positives = 24/64 (37%)
Frame = +2
Query: 53 KEDCNRRRMKNTATTEERRLQPPKEKNYLWCVGQMIVLLQFLVKSTGASKKERSLTSKKK 232
K N N T + R + P +W VG +VLL L + S E S +K
Sbjct: 35 KSKSNTNCKCNINTHRKSRTRCPDNGKTIWAVGFTLVLLTCLQQLKSVSADEESQDFQKN 94
Query: 233 QACR 244
R
Sbjct: 95 IPAR 98
>AE014297-4124|AAF56708.2| 939|Drosophila melanogaster CG31062-PA
protein.
Length = 939
Score = 25.8 bits (54), Expect = 8.4
Identities = 18/64 (28%), Positives = 24/64 (37%)
Frame = +2
Query: 53 KEDCNRRRMKNTATTEERRLQPPKEKNYLWCVGQMIVLLQFLVKSTGASKKERSLTSKKK 232
K N N T + R + P +W VG +VLL L + S E S +K
Sbjct: 35 KSKSNTNCKCNINTHRKSRTRCPDNGKTIWAVGFTLVLLTCLQQLKSVSADEESQDFQKN 94
Query: 233 QACR 244
R
Sbjct: 95 IPAR 98
>AE014296-2787|AAF49424.2| 2224|Drosophila melanogaster CG9695-PA
protein.
Length = 2224
Score = 25.8 bits (54), Expect = 8.4
Identities = 16/43 (37%), Positives = 20/43 (46%)
Frame = +1
Query: 64 QSPKNEEYCNHRRKKTATTEGKKLFMVCWPNDCTAAVSCEVYG 192
Q+P + E RKKT K L V P+ T+A S YG
Sbjct: 1854 QTPSDGEKERRFRKKTRARSAKDLATVGAPSASTSAPSRSSYG 1896
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.315 0.126 0.380
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,689,110
Number of Sequences: 53049
Number of extensions: 181658
Number of successful extensions: 690
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 674
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 690
length of database: 24,988,368
effective HSP length: 64
effective length of database: 21,593,232
effective search space used: 453457872
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
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