Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0022_G08
(259 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL132876-37|CAN99761.1| 1156|Caenorhabditis elegans Hypothetical... 27 1.4
AL132876-36|CAD21670.3| 1138|Caenorhabditis elegans Hypothetical... 27 1.4
U41533-1|AAA83162.2| 357|Caenorhabditis elegans Hypothetical pr... 27 1.8
AF039046-9|AAX22285.1| 341|Caenorhabditis elegans Serpentine re... 27 2.4
AF067945-15|AAC17678.2| 286|Caenorhabditis elegans Serpentine r... 26 3.2
U61946-10|AAC24388.1| 1827|Caenorhabditis elegans Hypothetical p... 25 5.6
U58758-15|AAB93424.1| 259|Caenorhabditis elegans Nanos related ... 25 5.6
U41105-7|AAA82402.2| 184|Caenorhabditis elegans Hypothetical pr... 25 5.6
U10414-4|AAW30666.1| 641|Caenorhabditis elegans Neurofibromatos... 25 5.6
U10414-3|AAK68385.1| 709|Caenorhabditis elegans Neurofibromatos... 25 5.6
U10414-2|AAA19073.1| 654|Caenorhabditis elegans Neurofibromatos... 25 5.6
AF101309-5|ABD94097.1| 543|Caenorhabditis elegans Hypothetical ... 25 5.6
AF101309-4|AAV58863.1| 669|Caenorhabditis elegans Hypothetical ... 25 5.6
AF101309-2|AAL32230.1| 1601|Caenorhabditis elegans Hypothetical ... 25 5.6
AF101309-1|AAL32229.1| 1680|Caenorhabditis elegans Hypothetical ... 25 5.6
Z92777-5|CAB07171.1| 409|Caenorhabditis elegans Hypothetical pr... 25 7.4
Z68160-4|CAA92292.1| 583|Caenorhabditis elegans Hypothetical pr... 25 7.4
U41272-9|AAA82452.4| 1256|Caenorhabditis elegans Prion-like-(q/n... 25 7.4
U39996-3|AAA81089.1| 621|Caenorhabditis elegans Hypothetical pr... 25 7.4
U39996-2|AAU20848.1| 607|Caenorhabditis elegans Hypothetical pr... 25 7.4
AL110484-8|CAB54399.1| 274|Caenorhabditis elegans Hypothetical ... 25 7.4
AL034393-1|CAA22308.1| 1634|Caenorhabditis elegans Hypothetical ... 25 7.4
AF067942-8|AAG45575.1| 349|Caenorhabditis elegans Serpentine re... 25 7.4
Z78014-2|CAB01429.1| 122|Caenorhabditis elegans Hypothetical pr... 25 9.8
Z49886-2|CAA90051.1| 268|Caenorhabditis elegans Hypothetical pr... 25 9.8
AL117195-31|CAN99709.1| 1459|Caenorhabditis elegans Hypothetical... 25 9.8
AL117195-30|CAB60772.3| 1456|Caenorhabditis elegans Hypothetical... 25 9.8
AF047662-4|AAC04444.1| 145|Caenorhabditis elegans Hypothetical ... 25 9.8
AF039040-5|AAB94181.2| 472|Caenorhabditis elegans Hypothetical ... 25 9.8
AC024791-35|AAF60675.2| 462|Caenorhabditis elegans Innexin prot... 25 9.8
>AL132876-37|CAN99761.1| 1156|Caenorhabditis elegans Hypothetical
protein Y105E8A.23b protein.
Length = 1156
Score = 27.5 bits (58), Expect = 1.4
Identities = 13/40 (32%), Positives = 21/40 (52%)
Frame = +2
Query: 50 KKEDCNRRRMKNTATTEERRLQPPKEKNYLWCVGQMIVLL 169
KKED + + ++ A + ++ E N LWC Q V+L
Sbjct: 657 KKEDVDVEKFRSYAKKKAEAIKMRNESNSLWCWMQYRVVL 696
>AL132876-36|CAD21670.3| 1138|Caenorhabditis elegans Hypothetical
protein Y105E8A.23a protein.
Length = 1138
Score = 27.5 bits (58), Expect = 1.4
Identities = 13/40 (32%), Positives = 21/40 (52%)
Frame = +2
Query: 50 KKEDCNRRRMKNTATTEERRLQPPKEKNYLWCVGQMIVLL 169
KKED + + ++ A + ++ E N LWC Q V+L
Sbjct: 657 KKEDVDVEKFRSYAKKKAEAIKMRNESNSLWCWMQYRVVL 696
>U41533-1|AAA83162.2| 357|Caenorhabditis elegans Hypothetical
protein R05F9.7 protein.
Length = 357
Score = 27.1 bits (57), Expect = 1.8
Identities = 19/49 (38%), Positives = 24/49 (48%), Gaps = 3/49 (6%)
Frame = +2
Query: 44 SWKKEDCNRRRMKNTATTEERRLQPP---KEKNYLWCVGQMIVLLQFLV 181
SWK E N R+MKN T ++ Q K YL + M+V L F V
Sbjct: 221 SWKAE--NLRKMKNVNYTLSKKFQVEENVKIIKYLQVMSSMLVFLIFFV 267
>AF039046-9|AAX22285.1| 341|Caenorhabditis elegans Serpentine
receptor, class j protein23, isoform b protein.
Length = 341
Score = 26.6 bits (56), Expect = 2.4
Identities = 10/29 (34%), Positives = 18/29 (62%)
Frame = -1
Query: 94 GCSILHSSAIAVFFLPASSASLIVFFLPT 8
G ++ H+S++ V P + I+FF+PT
Sbjct: 277 GRAVYHTSSVLVSAFPFFDPTAIIFFVPT 305
>AF067945-15|AAC17678.2| 286|Caenorhabditis elegans Serpentine
receptor, class x protein16 protein.
Length = 286
Score = 26.2 bits (55), Expect = 3.2
Identities = 12/40 (30%), Positives = 20/40 (50%)
Frame = -1
Query: 124 LRWLQSSFFGGCSILHSSAIAVFFLPASSASLIVFFLPTL 5
L +++ +FF G +I P S S+I+F + TL
Sbjct: 217 LNFIKQTFFQGTTIFTGQVTYYIIAPLLSNSIIIFIVGTL 256
>U61946-10|AAC24388.1| 1827|Caenorhabditis elegans Hypothetical
protein F47C12.1 protein.
Length = 1827
Score = 25.4 bits (53), Expect = 5.6
Identities = 15/41 (36%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Frame = +1
Query: 64 QSPKNEEYCNHRRKKTAT-TEGKKLFMVCWPNDCTAAVSCE 183
Q ++ C TAT T G+ L C+P DC+A + CE
Sbjct: 1640 QPTVGQQSCIECSNTTATQTTGESLESSCFPIDCSAKM-CE 1679
>U58758-15|AAB93424.1| 259|Caenorhabditis elegans Nanos related
protein 2 protein.
Length = 259
Score = 25.4 bits (53), Expect = 5.6
Identities = 15/45 (33%), Positives = 23/45 (51%)
Frame = -3
Query: 137 NNFFPSVVAVFFLRWLQYSSFFGDCSLLSSSFFRKLNSLLSSNPR 3
+ FF SVVA F + +++ + D S SF + L+ NPR
Sbjct: 104 SGFFDSVVASDFNLYGKFNDWLNDSKPRSGSFAIESAEELARNPR 148
>U41105-7|AAA82402.2| 184|Caenorhabditis elegans Hypothetical
protein T02G5.11 protein.
Length = 184
Score = 25.4 bits (53), Expect = 5.6
Identities = 15/45 (33%), Positives = 23/45 (51%)
Frame = -3
Query: 137 NNFFPSVVAVFFLRWLQYSSFFGDCSLLSSSFFRKLNSLLSSNPR 3
+ FF SVVA F + +++ + D S SF + L+ NPR
Sbjct: 29 SGFFDSVVASDFNLYGKFNDWLNDSKPRSGSFAIESAEELARNPR 73
>U10414-4|AAW30666.1| 641|Caenorhabditis elegans Neurofibromatosis
homolog protein1, isoform c protein.
Length = 641
Score = 25.4 bits (53), Expect = 5.6
Identities = 17/72 (23%), Positives = 30/72 (41%)
Frame = +2
Query: 41 RSWKKEDCNRRRMKNTATTEERRLQPPKEKNYLWCVGQMIVLLQFLVKSTGASKKERSLT 220
RS KED RR + ER+ + EK Y ++ V+ L+K+ +K
Sbjct: 314 RSQAKEDKQRRAAEQAKVALERKERQQMEKEYKEMKQKVEVMTLELMKAQENIRKAEEAN 373
Query: 221 SKKKQACREEKY 256
+ + R ++
Sbjct: 374 DQLAEKARHSEH 385
>U10414-3|AAK68385.1| 709|Caenorhabditis elegans Neurofibromatosis
homolog protein1, isoform b protein.
Length = 709
Score = 25.4 bits (53), Expect = 5.6
Identities = 17/72 (23%), Positives = 30/72 (41%)
Frame = +2
Query: 41 RSWKKEDCNRRRMKNTATTEERRLQPPKEKNYLWCVGQMIVLLQFLVKSTGASKKERSLT 220
RS KED RR + ER+ + EK Y ++ V+ L+K+ +K
Sbjct: 314 RSQAKEDKQRRAAEQAKVALERKERQQMEKEYKEMKQKVEVMTLELMKAQENIRKAEEAN 373
Query: 221 SKKKQACREEKY 256
+ + R ++
Sbjct: 374 DQLAEKARHSEH 385
>U10414-2|AAA19073.1| 654|Caenorhabditis elegans Neurofibromatosis
homolog protein1, isoform a protein.
Length = 654
Score = 25.4 bits (53), Expect = 5.6
Identities = 17/72 (23%), Positives = 30/72 (41%)
Frame = +2
Query: 41 RSWKKEDCNRRRMKNTATTEERRLQPPKEKNYLWCVGQMIVLLQFLVKSTGASKKERSLT 220
RS KED RR + ER+ + EK Y ++ V+ L+K+ +K
Sbjct: 314 RSQAKEDKQRRAAEQAKVALERKERQQMEKEYKEMKQKVEVMTLELMKAQENIRKAEEAN 373
Query: 221 SKKKQACREEKY 256
+ + R ++
Sbjct: 374 DQLAEKARHSEH 385
>AF101309-5|ABD94097.1| 543|Caenorhabditis elegans Hypothetical
protein H24G06.1e protein.
Length = 543
Score = 25.4 bits (53), Expect = 5.6
Identities = 11/46 (23%), Positives = 24/46 (52%)
Frame = +1
Query: 121 EGKKLFMVCWPNDCTAAVSCEVYGSVEERKIAYLEKKTSMSRRKIL 258
+G K ++C DC + V S++ +K+ + +M ++KI+
Sbjct: 442 DGTKNPLICHVQDCMEQLRIHVDKSLQAKKLVEDDTSLAMEQKKIV 487
>AF101309-4|AAV58863.1| 669|Caenorhabditis elegans Hypothetical
protein H24G06.1d protein.
Length = 669
Score = 25.4 bits (53), Expect = 5.6
Identities = 11/46 (23%), Positives = 24/46 (52%)
Frame = +1
Query: 121 EGKKLFMVCWPNDCTAAVSCEVYGSVEERKIAYLEKKTSMSRRKIL 258
+G K ++C DC + V S++ +K+ + +M ++KI+
Sbjct: 568 DGTKNPLICHVQDCMEQLRIHVDKSLQAKKLVEDDTSLAMEQKKIV 613
>AF101309-2|AAL32230.1| 1601|Caenorhabditis elegans Hypothetical
protein H24G06.1b protein.
Length = 1601
Score = 25.4 bits (53), Expect = 5.6
Identities = 11/46 (23%), Positives = 24/46 (52%)
Frame = +1
Query: 121 EGKKLFMVCWPNDCTAAVSCEVYGSVEERKIAYLEKKTSMSRRKIL 258
+G K ++C DC + V S++ +K+ + +M ++KI+
Sbjct: 1500 DGTKNPLICHVQDCMEQLRIHVDKSLQAKKLVEDDTSLAMEQKKIV 1545
>AF101309-1|AAL32229.1| 1680|Caenorhabditis elegans Hypothetical
protein H24G06.1a protein.
Length = 1680
Score = 25.4 bits (53), Expect = 5.6
Identities = 11/46 (23%), Positives = 24/46 (52%)
Frame = +1
Query: 121 EGKKLFMVCWPNDCTAAVSCEVYGSVEERKIAYLEKKTSMSRRKIL 258
+G K ++C DC + V S++ +K+ + +M ++KI+
Sbjct: 1579 DGTKNPLICHVQDCMEQLRIHVDKSLQAKKLVEDDTSLAMEQKKIV 1624
>Z92777-5|CAB07171.1| 409|Caenorhabditis elegans Hypothetical
protein C17H1.7 protein.
Length = 409
Score = 25.0 bits (52), Expect = 7.4
Identities = 14/63 (22%), Positives = 33/63 (52%)
Frame = +2
Query: 50 KKEDCNRRRMKNTATTEERRLQPPKEKNYLWCVGQMIVLLQFLVKSTGASKKERSLTSKK 229
++++CNR+RM++ ++E + + +E+ + + L Q T +K+E L +
Sbjct: 38 RRDECNRQRMRDLRSSELSQRKTEEERA---DIQRQAALEQLQATKTENNKREDELRKSQ 94
Query: 230 KQA 238
+A
Sbjct: 95 FEA 97
>Z68160-4|CAA92292.1| 583|Caenorhabditis elegans Hypothetical
protein D1046.4 protein.
Length = 583
Score = 25.0 bits (52), Expect = 7.4
Identities = 9/33 (27%), Positives = 20/33 (60%)
Frame = -3
Query: 125 PSVVAVFFLRWLQYSSFFGDCSLLSSSFFRKLN 27
P + ++ +++LQ+SSF G ++ + F K +
Sbjct: 360 PLLTNIYSIKFLQFSSFAGSAVIMITLFVTKFH 392
>U41272-9|AAA82452.4| 1256|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 62
protein.
Length = 1256
Score = 25.0 bits (52), Expect = 7.4
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = -3
Query: 83 SSFFGDCSLLSSSFFRKLNSLLS 15
S+FFGD + + FF K NS S
Sbjct: 557 SNFFGDMNQTGTGFFMKDNSCFS 579
>U39996-3|AAA81089.1| 621|Caenorhabditis elegans Hypothetical
protein C56E6.3a protein.
Length = 621
Score = 25.0 bits (52), Expect = 7.4
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = +2
Query: 203 KERSLTSKKKQACREEKYY 259
KE SLT KKKQ +K+Y
Sbjct: 591 KELSLTEKKKQLMNFKKFY 609
>U39996-2|AAU20848.1| 607|Caenorhabditis elegans Hypothetical
protein C56E6.3b protein.
Length = 607
Score = 25.0 bits (52), Expect = 7.4
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = +2
Query: 203 KERSLTSKKKQACREEKYY 259
KE SLT KKKQ +K+Y
Sbjct: 577 KELSLTEKKKQLMNFKKFY 595
>AL110484-8|CAB54399.1| 274|Caenorhabditis elegans Hypothetical
protein Y38E10A.8 protein.
Length = 274
Score = 25.0 bits (52), Expect = 7.4
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = -3
Query: 203 SSTLP*TSQETAAVQSFGQHTINNFFPSV 117
S+TLP ++E + S G+H+ FF V
Sbjct: 53 SATLPRAAREVTTITSIGRHSGYIFFDEV 81
>AL034393-1|CAA22308.1| 1634|Caenorhabditis elegans Hypothetical
protein Y18D10A.1 protein.
Length = 1634
Score = 25.0 bits (52), Expect = 7.4
Identities = 11/37 (29%), Positives = 22/37 (59%)
Frame = +3
Query: 18 KKTIKLAEEAGRKKTAIAEE*RILQPPKKEDCNHRRK 128
+ T+KL E AG++ T++ + L+ K E+ + +K
Sbjct: 141 ESTVKLLETAGKRMTSLDNQVTTLKAAKIENSSKTKK 177
>AF067942-8|AAG45575.1| 349|Caenorhabditis elegans Serpentine
receptor, class h protein62 protein.
Length = 349
Score = 25.0 bits (52), Expect = 7.4
Identities = 14/50 (28%), Positives = 23/50 (46%)
Frame = -3
Query: 176 ETAAVQSFGQHTINNFFPSVVAVFFLRWLQYSSFFGDCSLLSSSFFRKLN 27
E V +FG H + S A+FF+ LQ +F C + +++ N
Sbjct: 199 EPTVVIAFGNHWESYLIQSSKALFFISMLQI-LYFSACCIYYLVIYKRSN 247
>Z78014-2|CAB01429.1| 122|Caenorhabditis elegans Hypothetical
protein F42E8.2 protein.
Length = 122
Score = 24.6 bits (51), Expect = 9.8
Identities = 10/24 (41%), Positives = 11/24 (45%)
Frame = -2
Query: 210 LSFFDAPVDFTRNCSSTIIWPTHH 139
+ F AP D T C S W HH
Sbjct: 85 IHFAPAPADATDACCSHSCWNCHH 108
>Z49886-2|CAA90051.1| 268|Caenorhabditis elegans Hypothetical
protein C06A1.2 protein.
Length = 268
Score = 24.6 bits (51), Expect = 9.8
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = +1
Query: 112 ATTEGKKLFMVCWPNDCTAAVSCEVY 189
AT E + + + WP +CT CE Y
Sbjct: 167 ATVESR-MTLCGWPTECTELSCCESY 191
>AL117195-31|CAN99709.1| 1459|Caenorhabditis elegans Hypothetical
protein Y57A10A.18b protein.
Length = 1459
Score = 24.6 bits (51), Expect = 9.8
Identities = 12/30 (40%), Positives = 15/30 (50%), Gaps = 1/30 (3%)
Frame = +2
Query: 38 GRSWKKEDCNRRRMKNT-ATTEERRLQPPK 124
G SW E+C R + N + EE PPK
Sbjct: 168 GPSWNDENCKLRLVINRFSQLEETMCSPPK 197
>AL117195-30|CAB60772.3| 1456|Caenorhabditis elegans Hypothetical
protein Y57A10A.18a protein.
Length = 1456
Score = 24.6 bits (51), Expect = 9.8
Identities = 12/30 (40%), Positives = 15/30 (50%), Gaps = 1/30 (3%)
Frame = +2
Query: 38 GRSWKKEDCNRRRMKNT-ATTEERRLQPPK 124
G SW E+C R + N + EE PPK
Sbjct: 168 GPSWNDENCKLRLVINRFSQLEETMCSPPK 197
>AF047662-4|AAC04444.1| 145|Caenorhabditis elegans Hypothetical
protein T22B2.6 protein.
Length = 145
Score = 24.6 bits (51), Expect = 9.8
Identities = 11/30 (36%), Positives = 13/30 (43%)
Frame = +1
Query: 106 KTATTEGKKLFMVCWPNDCTAAVSCEVYGS 195
K T+G K+ C PN C S GS
Sbjct: 111 KITITQGDKVISKCGPNSCMCPPSYSQCGS 140
>AF039040-5|AAB94181.2| 472|Caenorhabditis elegans Hypothetical
protein T22B11.1 protein.
Length = 472
Score = 24.6 bits (51), Expect = 9.8
Identities = 12/32 (37%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
Frame = -1
Query: 121 RWLQSSFFGGCSILHS-SAIAVFFLPASSASL 29
RW ++S+ GCS +S I V+F P L
Sbjct: 55 RWAKASYLKGCSEENSLRIIPVYFWPGERVDL 86
>AC024791-35|AAF60675.2| 462|Caenorhabditis elegans Innexin protein
22 protein.
Length = 462
Score = 24.6 bits (51), Expect = 9.8
Identities = 10/26 (38%), Positives = 13/26 (50%)
Frame = -3
Query: 152 GQHTINNFFPSVVAVFFLRWLQYSSF 75
G INN P VAV + +W + F
Sbjct: 94 GTMNINNIMPQEVAVTYYQWTPFIIF 119
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.315 0.126 0.380
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,779,046
Number of Sequences: 27780
Number of extensions: 105371
Number of successful extensions: 449
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 437
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 448
length of database: 12,740,198
effective HSP length: 64
effective length of database: 10,962,278
effective search space used: 230207838
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
- SilkBase 1999-2023 -