Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0022_G08
         (259 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY569781-1|AAS75781.1|  461|Apis mellifera neuronal nicotinic ac...    22   1.1  
AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    21   1.8  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    21   2.4  
AF274024-1|AAF90150.1|  232|Apis mellifera tetraspanin F139 prot...    21   3.2  
AY395072-1|AAQ96728.1|  593|Apis mellifera GABA neurotransmitter...    20   4.3  
AY395071-1|AAQ96727.1|  646|Apis mellifera GABA neurotransmitter...    20   4.3  
DQ325121-1|ABD14135.1|  181|Apis mellifera complementary sex det...    20   5.6  
DQ325120-1|ABD14134.1|  181|Apis mellifera complementary sex det...    20   5.6  
DQ325119-1|ABD14133.1|  181|Apis mellifera complementary sex det...    20   5.6  
DQ325118-1|ABD14132.1|  181|Apis mellifera complementary sex det...    20   5.6  
DQ325117-1|ABD14131.1|  181|Apis mellifera complementary sex det...    20   5.6  
DQ325116-1|ABD14130.1|  181|Apis mellifera complementary sex det...    20   5.6  
DQ325114-1|ABD14128.1|  181|Apis mellifera complementary sex det...    20   5.6  
DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor pro...    19   7.4  
DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor pro...    19   7.4  
AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled rec...    19   7.4  

>AY569781-1|AAS75781.1|  461|Apis mellifera neuronal nicotinic
           acetylcholine Apisa7-2 subunit protein.
          Length = 461

 Score = 22.2 bits (45), Expect = 1.1
 Identities = 8/14 (57%), Positives = 8/14 (57%)
 Frame = -2

Query: 180 TRNCSSTIIWPTHH 139
           T NC  T IW  HH
Sbjct: 53  TTNCWVTQIWTDHH 66


>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 21.4 bits (43), Expect = 1.8
 Identities = 9/20 (45%), Positives = 14/20 (70%)
 Frame = +2

Query: 176 LVKSTGASKKERSLTSKKKQ 235
           + K+  ASKK+R  +S KK+
Sbjct: 595 IYKANKASKKKREKSSAKKE 614


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
           protein.
          Length = 1770

 Score = 21.0 bits (42), Expect = 2.4
 Identities = 8/26 (30%), Positives = 15/26 (57%)
 Frame = +2

Query: 56  EDCNRRRMKNTATTEERRLQPPKEKN 133
           ++C++R   +   T+  RL+P   KN
Sbjct: 220 DNCDQRINYHFGMTDNSRLEPGTNKN 245


>AF274024-1|AAF90150.1|  232|Apis mellifera tetraspanin F139
           protein.
          Length = 232

 Score = 20.6 bits (41), Expect = 3.2
 Identities = 9/28 (32%), Positives = 13/28 (46%)
 Frame = -3

Query: 128 FPSVVAVFFLRWLQYSSFFGDCSLLSSS 45
           FPS+  +     +   SFFG C  +  S
Sbjct: 50  FPSITLIVLGSIIFVISFFGCCGAIRES 77


>AY395072-1|AAQ96728.1|  593|Apis mellifera GABA neurotransmitter
           transporter-1B protein.
          Length = 593

 Score = 20.2 bits (40), Expect = 4.3
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = +1

Query: 127 KKLFMVCWPNDCTAAVSCEVYGSV 198
           K   +VC  N CT+ +S  V  SV
Sbjct: 313 KDALIVCTVNSCTSMLSGIVIFSV 336


>AY395071-1|AAQ96727.1|  646|Apis mellifera GABA neurotransmitter
           transporter-1B protein.
          Length = 646

 Score = 20.2 bits (40), Expect = 4.3
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = +1

Query: 127 KKLFMVCWPNDCTAAVSCEVYGSV 198
           K   +VC  N CT+ +S  V  SV
Sbjct: 366 KDALIVCTVNSCTSMLSGIVIFSV 389


>DQ325121-1|ABD14135.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 19.8 bits (39), Expect = 5.6
 Identities = 7/19 (36%), Positives = 12/19 (63%)
 Frame = +2

Query: 197 SKKERSLTSKKKQACREEK 253
           + KERS    +++ C+E K
Sbjct: 62  TSKERSRDRTERERCKEPK 80


>DQ325120-1|ABD14134.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 19.8 bits (39), Expect = 5.6
 Identities = 7/19 (36%), Positives = 12/19 (63%)
 Frame = +2

Query: 197 SKKERSLTSKKKQACREEK 253
           + KERS    +++ C+E K
Sbjct: 62  TSKERSRDRTERERCKEPK 80


>DQ325119-1|ABD14133.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 19.8 bits (39), Expect = 5.6
 Identities = 7/19 (36%), Positives = 12/19 (63%)
 Frame = +2

Query: 197 SKKERSLTSKKKQACREEK 253
           + KERS    +++ C+E K
Sbjct: 62  TSKERSRDRTERERCKEPK 80


>DQ325118-1|ABD14132.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 19.8 bits (39), Expect = 5.6
 Identities = 7/19 (36%), Positives = 12/19 (63%)
 Frame = +2

Query: 197 SKKERSLTSKKKQACREEK 253
           + KERS    +++ C+E K
Sbjct: 62  TSKERSRDRTERERCKEPK 80


>DQ325117-1|ABD14131.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 19.8 bits (39), Expect = 5.6
 Identities = 7/19 (36%), Positives = 12/19 (63%)
 Frame = +2

Query: 197 SKKERSLTSKKKQACREEK 253
           + KERS    +++ C+E K
Sbjct: 62  TSKERSRDRTERERCKEPK 80


>DQ325116-1|ABD14130.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 19.8 bits (39), Expect = 5.6
 Identities = 7/19 (36%), Positives = 12/19 (63%)
 Frame = +2

Query: 197 SKKERSLTSKKKQACREEK 253
           + KERS    +++ C+E K
Sbjct: 62  TSKERSRDRTERERCKEPK 80


>DQ325114-1|ABD14128.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 19.8 bits (39), Expect = 5.6
 Identities = 7/19 (36%), Positives = 12/19 (63%)
 Frame = +2

Query: 197 SKKERSLTSKKKQACREEK 253
           + KERS    +++ C+E K
Sbjct: 62  TSKERSRDRTERERCKEPK 80


>DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 19.4 bits (38), Expect = 7.4
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = -3

Query: 125 PSVVAVFFLRWLQY 84
           PS   V+F+ WL Y
Sbjct: 358 PSDRMVYFITWLGY 371


>DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 19.4 bits (38), Expect = 7.4
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = -3

Query: 125 PSVVAVFFLRWLQY 84
           PS   V+F+ WL Y
Sbjct: 358 PSDRMVYFITWLGY 371


>AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled
           receptor protein.
          Length = 399

 Score = 19.4 bits (38), Expect = 7.4
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = -3

Query: 125 PSVVAVFFLRWLQY 84
           PS   V+F+ WL Y
Sbjct: 358 PSDRMVYFITWLGY 371


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.315    0.126    0.380 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 68,689
Number of Sequences: 438
Number of extensions: 1239
Number of successful extensions: 16
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 146,343
effective HSP length: 48
effective length of database: 125,319
effective search space used:  4636803
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 37 (19.8 bits)