Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0022_G07
         (400 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY705394-1|AAU12503.1|  557|Anopheles gambiae nicotinic acetylch...    24   1.8  
X87410-1|CAA60857.1|  498|Anopheles gambiae maltase-like protein...    24   2.4  
AY423354-1|AAQ94040.1|  112|Anopheles gambiae defender against p...    23   3.1  
CR954257-4|CAJ14155.1|  196|Anopheles gambiae predicted protein ...    22   9.5  
AF387862-2|AAL56548.1|  942|Anopheles gambiae pol polyprotein pr...    22   9.5  
AF387858-1|AAL58708.1|  209|Anopheles gambiae integrase protein.       22   9.5  
AF387857-1|AAL58707.1|  215|Anopheles gambiae integrase protein.       22   9.5  
AF387850-1|AAL58705.1|  209|Anopheles gambiae integrase protein.       22   9.5  

>AY705394-1|AAU12503.1|  557|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 1 protein.
          Length = 557

 Score = 24.2 bits (50), Expect = 1.8
 Identities = 10/36 (27%), Positives = 16/36 (44%)
 Frame = -2

Query: 126 FTVTKRDFTWTVRLSGIFTFWFATICFILGLCLTLV 19
           F   K D+ +   +      W  TI  +LG CL ++
Sbjct: 488 FESVKEDWKYVALVLDRLFLWIFTIACVLGTCLIIL 523


>X87410-1|CAA60857.1|  498|Anopheles gambiae maltase-like protein
           Agm1 protein.
          Length = 498

 Score = 23.8 bits (49), Expect = 2.4
 Identities = 10/32 (31%), Positives = 17/32 (53%)
 Frame = -1

Query: 355 SGDTVDREMSVHCTHLVLESLGHTFDHVFDMR 260
           SG+T D +   +  H   ++L  TFD ++  R
Sbjct: 243 SGETDDPDNPTYLVHQHTQNLDETFDMMYQWR 274


>AY423354-1|AAQ94040.1|  112|Anopheles gambiae defender against
           programmed cell death protein.
          Length = 112

 Score = 23.4 bits (48), Expect = 3.1
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = -2

Query: 51  CFILGLCLTLVPN 13
           CF+LG+CL L  N
Sbjct: 65  CFVLGVCLRLQSN 77


>CR954257-4|CAJ14155.1|  196|Anopheles gambiae predicted protein
           protein.
          Length = 196

 Score = 21.8 bits (44), Expect = 9.5
 Identities = 8/25 (32%), Positives = 14/25 (56%)
 Frame = +1

Query: 277 DQRCDQGIPIQDACSVRSFPYQLCH 351
           +Q  D  +   + C+V +  +QLCH
Sbjct: 131 NQCADGKVRFMNVCAVLNQEHQLCH 155


>AF387862-2|AAL56548.1|  942|Anopheles gambiae pol polyprotein
           protein.
          Length = 942

 Score = 21.8 bits (44), Expect = 9.5
 Identities = 9/28 (32%), Positives = 17/28 (60%), Gaps = 4/28 (14%)
 Frame = -1

Query: 79  NLHLLVCNYLLHI----RALFDPRAELL 8
           NLH+  C+ ++H+    R+  DP+ + L
Sbjct: 239 NLHIFGCSAIVHVPAEKRSKLDPKGKKL 266


>AF387858-1|AAL58708.1|  209|Anopheles gambiae integrase protein.
          Length = 209

 Score = 21.8 bits (44), Expect = 9.5
 Identities = 9/28 (32%), Positives = 17/28 (60%), Gaps = 4/28 (14%)
 Frame = -1

Query: 79 NLHLLVCNYLLHI----RALFDPRAELL 8
          NLH+  C+ ++H+    R+  DP+ + L
Sbjct: 9  NLHIFGCSAIVHVPAEKRSKLDPKGKKL 36


>AF387857-1|AAL58707.1|  215|Anopheles gambiae integrase protein.
          Length = 215

 Score = 21.8 bits (44), Expect = 9.5
 Identities = 9/28 (32%), Positives = 17/28 (60%), Gaps = 4/28 (14%)
 Frame = -1

Query: 79 NLHLLVCNYLLHI----RALFDPRAELL 8
          NLH+  C+ ++H+    R+  DP+ + L
Sbjct: 9  NLHIFGCSAIVHVPAEKRSKLDPKGKKL 36


>AF387850-1|AAL58705.1|  209|Anopheles gambiae integrase protein.
          Length = 209

 Score = 21.8 bits (44), Expect = 9.5
 Identities = 9/28 (32%), Positives = 17/28 (60%), Gaps = 4/28 (14%)
 Frame = -1

Query: 79 NLHLLVCNYLLHI----RALFDPRAELL 8
          NLH+  C+ ++H+    R+  DP+ + L
Sbjct: 9  NLHIFGCSAIVHVPAEKRSKLDPKGKKL 36


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 425,915
Number of Sequences: 2352
Number of extensions: 8575
Number of successful extensions: 13
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 31639662
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)