Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0022_G07
         (400 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY569711-1|AAS86664.1|  401|Apis mellifera feminizer protein.          26   0.14 
Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1 p...    23   1.3  
AY569719-1|AAS86672.1|  401|Apis mellifera feminizer protein.          23   1.3  
AY569718-1|AAS86671.1|  401|Apis mellifera feminizer protein.          23   1.3  
AY569715-1|AAS86668.1|  401|Apis mellifera feminizer protein.          23   1.3  
AY350616-1|AAQ57658.1|  401|Apis mellifera complementary sex det...    23   1.3  
AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    22   2.2  
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    22   3.0  
AB238796-1|BAE93398.1|  128|Apis mellifera Queen brain-selective...    22   3.0  
EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase p...    21   3.9  
AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    20   9.1  
AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cycl...    20   9.1  
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    20   9.1  

>AY569711-1|AAS86664.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 26.2 bits (55), Expect = 0.14
 Identities = 22/74 (29%), Positives = 27/74 (36%)
 Frame = +1

Query: 73  EDS*ESHRPCEIAFGDSERSSRSSKTKLQTLGC*HSHG*SSPVESGEMVRF*KRTSCC*D 252
           E S    + C+  +  S  S RS     Q     HS    S  E G   R     SC  D
Sbjct: 198 EKSENETKTCK-KYAISSNSLRSRSRSFQRTSSCHSRYEDSRHEDGNSYRNDGERSCSRD 256

Query: 253 SMLSCRKHDQRCDQ 294
                +K D+R DQ
Sbjct: 257 RSREYKKKDRRYDQ 270


>Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1
           protein.
          Length = 402

 Score = 23.0 bits (47), Expect = 1.3
 Identities = 13/45 (28%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
 Frame = -2

Query: 138 PRGPFTVTKRDFTWTVR-LSGIFTFWFATICFILGLCLTLVPNYC 7
           P  P+ V+      TV  + G+F      IC++   C+ +V +YC
Sbjct: 259 PTSPYHVSDHKAAITVGVIMGVFL-----ICWVPFFCVNIVTSYC 298


>AY569719-1|AAS86672.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 23.0 bits (47), Expect = 1.3
 Identities = 21/74 (28%), Positives = 26/74 (35%)
 Frame = +1

Query: 73  EDS*ESHRPCEIAFGDSERSSRSSKTKLQTLGC*HSHG*SSPVESGEMVRF*KRTSCC*D 252
           E S    + C+  +  S  S RS     Q     HS    S  E     R     SC  D
Sbjct: 198 EKSENETKTCK-KYAISSNSLRSRSRSFQRTSSCHSRYEDSRHEDRNSYRNDGERSCSRD 256

Query: 253 SMLSCRKHDQRCDQ 294
                +K D+R DQ
Sbjct: 257 RSREYKKKDRRYDQ 270


>AY569718-1|AAS86671.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 23.0 bits (47), Expect = 1.3
 Identities = 21/74 (28%), Positives = 26/74 (35%)
 Frame = +1

Query: 73  EDS*ESHRPCEIAFGDSERSSRSSKTKLQTLGC*HSHG*SSPVESGEMVRF*KRTSCC*D 252
           E S    + C+  +  S  S RS     Q     HS    S  E     R     SC  D
Sbjct: 198 EKSENETKTCK-KYAISSNSLRSRSRSFQRTSSCHSRYEDSRHEDRNSYRNDGERSCSRD 256

Query: 253 SMLSCRKHDQRCDQ 294
                +K D+R DQ
Sbjct: 257 RSREYKKKDRRYDQ 270


>AY569715-1|AAS86668.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 23.0 bits (47), Expect = 1.3
 Identities = 21/74 (28%), Positives = 26/74 (35%)
 Frame = +1

Query: 73  EDS*ESHRPCEIAFGDSERSSRSSKTKLQTLGC*HSHG*SSPVESGEMVRF*KRTSCC*D 252
           E S    + C+  +  S  S RS     Q     HS    S  E     R     SC  D
Sbjct: 198 EKSENETKTCK-KYAISSNSLRSRSRSFQRTSSCHSRYEDSRHEDRNSYRNDGERSCSRD 256

Query: 253 SMLSCRKHDQRCDQ 294
                +K D+R DQ
Sbjct: 257 RSREYKKKDRRYDQ 270


>AY350616-1|AAQ57658.1|  401|Apis mellifera complementary sex
           determiner protein.
          Length = 401

 Score = 23.0 bits (47), Expect = 1.3
 Identities = 21/74 (28%), Positives = 26/74 (35%)
 Frame = +1

Query: 73  EDS*ESHRPCEIAFGDSERSSRSSKTKLQTLGC*HSHG*SSPVESGEMVRF*KRTSCC*D 252
           E S    + C+  +  S  S RS     Q     HS    S  E     R     SC  D
Sbjct: 198 EKSENETKTCK-KYAISSNSLRSRSRSFQRTSSCHSRYEDSRHEDRNSYRNDGERSCSRD 256

Query: 253 SMLSCRKHDQRCDQ 294
                +K D+R DQ
Sbjct: 257 RSREYKKKDRRYDQ 270


>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 22.2 bits (45), Expect = 2.2
 Identities = 14/43 (32%), Positives = 19/43 (44%), Gaps = 1/43 (2%)
 Frame = -2

Query: 258 HTVLTAASSFLEPNHFSTF-NWRGLTMRMSTAKCLKFRFRTPR 133
           + V +A  SF  P     F  WR     +ST K +   FRT +
Sbjct: 247 YVVYSALGSFYIPMLVMLFFYWRIYNAAVSTTKAINQGFRTTK 289


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 21.8 bits (44), Expect = 3.0
 Identities = 7/19 (36%), Positives = 10/19 (52%)
 Frame = +2

Query: 275 MIKGVTKGFQYKMRAVYAH 331
           M++G+  G QY     Y H
Sbjct: 740 MLRGIASGMQYLAEMNYVH 758


>AB238796-1|BAE93398.1|  128|Apis mellifera Queen brain-selective
           protein-1 protein.
          Length = 128

 Score = 21.8 bits (44), Expect = 3.0
 Identities = 13/41 (31%), Positives = 17/41 (41%), Gaps = 3/41 (7%)
 Frame = +1

Query: 259 LSCRKHDQRCDQGIPIQDACSV---RSFPYQLCHH*GKHNY 372
           L C     +C  GI +  AC +      P +LC   G  NY
Sbjct: 37  LGCGDSCHKCKYGIAMSSACGIVQCAKGPDELCG--GPQNY 75


>EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase
           protein.
          Length = 620

 Score = 21.4 bits (43), Expect = 3.9
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = +2

Query: 248 RTVCSHVENMIKGV 289
           R VC  +EN I+G+
Sbjct: 477 RAVCGRIENTIQGL 490


>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 20.2 bits (40), Expect = 9.1
 Identities = 6/14 (42%), Positives = 11/14 (78%)
 Frame = -1

Query: 400 LFTKEVTDLNNCVS 359
           +FT+E T+ N C++
Sbjct: 157 VFTREATERNVCIA 170


>AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cyclase
           alpha 1 subunit protein.
          Length = 699

 Score = 20.2 bits (40), Expect = 9.1
 Identities = 7/17 (41%), Positives = 10/17 (58%)
 Frame = -1

Query: 256 YCPNSS*FFFRTEPFLH 206
           +CP S    F + PFL+
Sbjct: 382 HCPESDSILFVSSPFLN 398


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 20.2 bits (40), Expect = 9.1
 Identities = 6/14 (42%), Positives = 11/14 (78%)
 Frame = -1

Query: 400 LFTKEVTDLNNCVS 359
           +FT+E T+ N C++
Sbjct: 247 VFTREATERNVCIA 260


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 109,308
Number of Sequences: 438
Number of extensions: 2335
Number of successful extensions: 13
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used:  9885360
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)