Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0022_G05
(312 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L42324-1|AAB65819.1| 331|Homo sapiens G protein-linked receptor... 31 0.95
BT009907-1|AAP88909.1| 331|Homo sapiens G protein-coupled recep... 31 0.95
BC066927-1|AAH66927.1| 331|Homo sapiens GPR18 protein protein. 31 0.95
BC050646-1|AAH50646.1| 331|Homo sapiens G protein-coupled recep... 31 0.95
BC008569-1|AAH08569.1| 331|Homo sapiens GPR18 protein protein. 31 0.95
AL160155-7|CAI14307.1| 98|Homo sapiens G protein-coupled recep... 31 0.95
AL160155-6|CAI14306.1| 331|Homo sapiens G protein-coupled recep... 31 0.95
AF261135-1|AAG44671.1| 333|Homo sapiens GPR18-iso protein. 31 0.95
Z93242-1|CAI42724.1| 1630|Homo sapiens Nance-Horan syndrome (con... 29 2.2
AY456993-1|AAS13456.1| 1473|Homo sapiens Nance-Horan syndrome pr... 29 2.2
AY456992-1|AAS13455.1| 1474|Homo sapiens Nance-Horan syndrome pr... 29 2.2
AY436752-1|AAR03104.1| 1630|Homo sapiens Nance-Horan syndrome pr... 29 2.2
AL845433-1|CAI41241.1| 1630|Homo sapiens Nance-Horan syndrome (c... 29 2.2
>L42324-1|AAB65819.1| 331|Homo sapiens G protein-linked receptor
protein.
Length = 331
Score = 30.7 bits (66), Expect = 0.95
Identities = 11/31 (35%), Positives = 19/31 (61%)
Frame = -1
Query: 300 YQSVFFCKLYIGFRNLYKYSCTCRQRDTVTL 208
Y +F L++ L+ +SCT ++R TVT+
Sbjct: 29 YSCIFIIGLFVNITALWVFSCTTKKRTTVTI 59
>BT009907-1|AAP88909.1| 331|Homo sapiens G protein-coupled receptor
18 protein.
Length = 331
Score = 30.7 bits (66), Expect = 0.95
Identities = 11/31 (35%), Positives = 19/31 (61%)
Frame = -1
Query: 300 YQSVFFCKLYIGFRNLYKYSCTCRQRDTVTL 208
Y +F L++ L+ +SCT ++R TVT+
Sbjct: 29 YSCIFIIGLFVNITALWVFSCTTKKRTTVTI 59
>BC066927-1|AAH66927.1| 331|Homo sapiens GPR18 protein protein.
Length = 331
Score = 30.7 bits (66), Expect = 0.95
Identities = 11/31 (35%), Positives = 19/31 (61%)
Frame = -1
Query: 300 YQSVFFCKLYIGFRNLYKYSCTCRQRDTVTL 208
Y +F L++ L+ +SCT ++R TVT+
Sbjct: 29 YSCIFIIGLFVNITALWVFSCTTKKRTTVTI 59
>BC050646-1|AAH50646.1| 331|Homo sapiens G protein-coupled receptor
18 protein.
Length = 331
Score = 30.7 bits (66), Expect = 0.95
Identities = 11/31 (35%), Positives = 19/31 (61%)
Frame = -1
Query: 300 YQSVFFCKLYIGFRNLYKYSCTCRQRDTVTL 208
Y +F L++ L+ +SCT ++R TVT+
Sbjct: 29 YSCIFIIGLFVNITALWVFSCTTKKRTTVTI 59
>BC008569-1|AAH08569.1| 331|Homo sapiens GPR18 protein protein.
Length = 331
Score = 30.7 bits (66), Expect = 0.95
Identities = 11/31 (35%), Positives = 19/31 (61%)
Frame = -1
Query: 300 YQSVFFCKLYIGFRNLYKYSCTCRQRDTVTL 208
Y +F L++ L+ +SCT ++R TVT+
Sbjct: 29 YSCIFIIGLFVNITALWVFSCTTKKRTTVTI 59
>AL160155-7|CAI14307.1| 98|Homo sapiens G protein-coupled receptor
18 protein.
Length = 98
Score = 30.7 bits (66), Expect = 0.95
Identities = 11/31 (35%), Positives = 19/31 (61%)
Frame = -1
Query: 300 YQSVFFCKLYIGFRNLYKYSCTCRQRDTVTL 208
Y +F L++ L+ +SCT ++R TVT+
Sbjct: 29 YSCIFIIGLFVNITALWVFSCTTKKRTTVTI 59
>AL160155-6|CAI14306.1| 331|Homo sapiens G protein-coupled receptor
18 protein.
Length = 331
Score = 30.7 bits (66), Expect = 0.95
Identities = 11/31 (35%), Positives = 19/31 (61%)
Frame = -1
Query: 300 YQSVFFCKLYIGFRNLYKYSCTCRQRDTVTL 208
Y +F L++ L+ +SCT ++R TVT+
Sbjct: 29 YSCIFIIGLFVNITALWVFSCTTKKRTTVTI 59
>AF261135-1|AAG44671.1| 333|Homo sapiens GPR18-iso protein.
Length = 333
Score = 30.7 bits (66), Expect = 0.95
Identities = 11/31 (35%), Positives = 19/31 (61%)
Frame = -1
Query: 300 YQSVFFCKLYIGFRNLYKYSCTCRQRDTVTL 208
Y +F L++ L+ +SCT ++R TVT+
Sbjct: 29 YSCIFIIGLFVNITALWVFSCTTKKRTTVTI 59
>Z93242-1|CAI42724.1| 1630|Homo sapiens Nance-Horan syndrome
(congenital cataracts and dental anomalies) protein.
Length = 1630
Score = 29.5 bits (63), Expect = 2.2
Identities = 16/59 (27%), Positives = 28/59 (47%)
Frame = -2
Query: 203 ELT*LHPTHTIRRYMSSVMDLEIHYFEQISNLCHGQQHSMQSTLRRIFPDKLCVYKVIL 27
EL + PTH + +V++ H+ + H +Q+++ TLR P L + IL
Sbjct: 1059 ELPIIPPTHLDLSALHNVLNKPFHHRHPLHVFTHNKQNTVGETLRSNPPPSLAITPTIL 1117
>AY456993-1|AAS13456.1| 1473|Homo sapiens Nance-Horan syndrome protein
isoform 2 protein.
Length = 1473
Score = 29.5 bits (63), Expect = 2.2
Identities = 16/59 (27%), Positives = 28/59 (47%)
Frame = -2
Query: 203 ELT*LHPTHTIRRYMSSVMDLEIHYFEQISNLCHGQQHSMQSTLRRIFPDKLCVYKVIL 27
EL + PTH + +V++ H+ + H +Q+++ TLR P L + IL
Sbjct: 902 ELPIIPPTHLDLSALHNVLNKPFHHRHPLHVFTHNKQNTVGETLRSNPPPSLAITPTIL 960
>AY456992-1|AAS13455.1| 1474|Homo sapiens Nance-Horan syndrome protein
isoform 1 protein.
Length = 1474
Score = 29.5 bits (63), Expect = 2.2
Identities = 16/59 (27%), Positives = 28/59 (47%)
Frame = -2
Query: 203 ELT*LHPTHTIRRYMSSVMDLEIHYFEQISNLCHGQQHSMQSTLRRIFPDKLCVYKVIL 27
EL + PTH + +V++ H+ + H +Q+++ TLR P L + IL
Sbjct: 903 ELPIIPPTHLDLSALHNVLNKPFHHRHPLHVFTHNKQNTVGETLRSNPPPSLAITPTIL 961
>AY436752-1|AAR03104.1| 1630|Homo sapiens Nance-Horan syndrome protein
protein.
Length = 1630
Score = 29.5 bits (63), Expect = 2.2
Identities = 16/59 (27%), Positives = 28/59 (47%)
Frame = -2
Query: 203 ELT*LHPTHTIRRYMSSVMDLEIHYFEQISNLCHGQQHSMQSTLRRIFPDKLCVYKVIL 27
EL + PTH + +V++ H+ + H +Q+++ TLR P L + IL
Sbjct: 1059 ELPIIPPTHLDLSALHNVLNKPFHHRHPLHVFTHNKQNTVGETLRSNPPPSLAITPTIL 1117
>AL845433-1|CAI41241.1| 1630|Homo sapiens Nance-Horan syndrome
(congenital cataracts and dental anomalies) protein.
Length = 1630
Score = 29.5 bits (63), Expect = 2.2
Identities = 16/59 (27%), Positives = 28/59 (47%)
Frame = -2
Query: 203 ELT*LHPTHTIRRYMSSVMDLEIHYFEQISNLCHGQQHSMQSTLRRIFPDKLCVYKVIL 27
EL + PTH + +V++ H+ + H +Q+++ TLR P L + IL
Sbjct: 1059 ELPIIPPTHLDLSALHNVLNKPFHHRHPLHVFTHNKQNTVGETLRSNPPPSLAITPTIL 1117
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 39,574,488
Number of Sequences: 237096
Number of extensions: 655640
Number of successful extensions: 1175
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1161
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1175
length of database: 76,859,062
effective HSP length: 78
effective length of database: 58,365,574
effective search space used: 1459139350
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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