Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0022_G03
         (414 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calc...    25   1.1  
AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical prote...    25   1.4  
AJ438610-11|CAD27483.1|  765|Anopheles gambiae hypothetical prot...    25   1.4  
CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transpos...    23   5.8  
AY578800-1|AAT07305.1|  379|Anopheles gambiae decapentaplegic pr...    23   5.8  
AB090812-1|BAC57899.1|  541|Anopheles gambiae gag-like protein p...    23   5.8  
U89799-1|AAD03792.1|  332|Anopheles gambiae Tc1-like transposase...    22   7.7  
AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.    22   7.7  

>EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calcium
            channel alpha1 subunit protein.
          Length = 1893

 Score = 25.0 bits (52), Expect = 1.1
 Identities = 14/63 (22%), Positives = 33/63 (52%)
 Frame = +2

Query: 104  KHPDLEKIPNLQVIKAMQSLKSRGYVKEQFAWRHFYWYLTNEGIEYLRIFLHLPPEIVPA 283
            K+ DL+K     +  A+++   R Y+ +       +W++T++  EY+ IF+ +    +  
Sbjct: 1134 KNCDLDKNQRNCIEFALKAKPIRRYIPKHRIQYKVWWFVTSQPFEYM-IFVLIMINTITL 1192

Query: 284  TLK 292
            ++K
Sbjct: 1193 SMK 1195


>AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical protein
           protein.
          Length = 1645

 Score = 24.6 bits (51), Expect = 1.4
 Identities = 13/40 (32%), Positives = 20/40 (50%)
 Frame = +2

Query: 257 HLPPEIVPATLKRSVRTETVRRGAVGRPDAPARTAEDRSA 376
           +LP  I P  L+ +      RR A+G  D P  ++ + SA
Sbjct: 455 YLPASINPVKLRETSTIRRQRRTALGNRDEPHSSSGNWSA 494


>AJ438610-11|CAD27483.1|  765|Anopheles gambiae hypothetical protein
           protein.
          Length = 765

 Score = 24.6 bits (51), Expect = 1.4
 Identities = 13/40 (32%), Positives = 20/40 (50%)
 Frame = +2

Query: 257 HLPPEIVPATLKRSVRTETVRRGAVGRPDAPARTAEDRSA 376
           +LP  I P  L+ +      RR A+G  D P  ++ + SA
Sbjct: 456 YLPASINPVKLRETSTIRRQRRTALGNRDEPHSSSGNWSA 495


>CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transposon
           polyprotein protein.
          Length = 1726

 Score = 22.6 bits (46), Expect = 5.8
 Identities = 11/33 (33%), Positives = 18/33 (54%)
 Frame = +3

Query: 177 MLRNSSHGGIFTGI*QMRVLNTLEFSCTYLLKL 275
           +L+NSSH G  +G+   +V  T+       L+L
Sbjct: 93  LLKNSSHSGASSGLNTTQVNTTISAGTQNHLRL 125


>AY578800-1|AAT07305.1|  379|Anopheles gambiae decapentaplegic
           protein.
          Length = 379

 Score = 22.6 bits (46), Expect = 5.8
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = +3

Query: 351 HEQLKIDQLIGAHHQLELL 407
           HE+  IDQ    HH+  LL
Sbjct: 73  HEESHIDQRFQHHHRFRLL 91


>AB090812-1|BAC57899.1|  541|Anopheles gambiae gag-like protein
           protein.
          Length = 541

 Score = 22.6 bits (46), Expect = 5.8
 Identities = 12/41 (29%), Positives = 18/41 (43%)
 Frame = +2

Query: 287 LKRSVRTETVRRGAVGRPDAPARTAEDRSAYRRAPPAGAPH 409
           L  + R+ T R+    R  +    A D S+Y +    G PH
Sbjct: 486 LAHACRSSTDRQQLCIRCGSEGHKARDCSSYVKCAACGGPH 526


>U89799-1|AAD03792.1|  332|Anopheles gambiae Tc1-like transposase
           protein.
          Length = 332

 Score = 22.2 bits (45), Expect = 7.7
 Identities = 10/28 (35%), Positives = 16/28 (57%)
 Frame = -1

Query: 294 LFRVAGTISGGKCRKILRYSIPSFVKYQ 211
           LFR+ GT++    RKIL   +  + + Q
Sbjct: 197 LFRINGTLNSEGYRKILSREMLPYARQQ 224


>AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.
          Length = 1376

 Score = 22.2 bits (45), Expect = 7.7
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = -1

Query: 318 RTVSVRTDLFRVAGTISGG 262
           R V++  D+   +GT+SGG
Sbjct: 724 RVVTIGGDVIETSGTMSGG 742


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 413,287
Number of Sequences: 2352
Number of extensions: 7684
Number of successful extensions: 22
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 33777477
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)