Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0022_G03
(414 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY070896-1|AAL48518.1| 160|Drosophila melanogaster LP04958p pro... 206 9e-54
AE014298-2882|AAN09507.1| 160|Drosophila melanogaster CG14206-P... 206 9e-54
AE014298-2881|AAF48978.2| 160|Drosophila melanogaster CG14206-P... 206 9e-54
AE014297-4155|AAF56731.1| 163|Drosophila melanogaster CG12275-P... 179 1e-45
AF145693-1|AAD38668.2| 162|Drosophila melanogaster LD32148p pro... 177 5e-45
AY118800-1|AAM50660.1| 255|Drosophila melanogaster GH19623p pro... 32 0.35
AE013599-635|AAF59104.2| 255|Drosophila melanogaster CG30362-PA... 32 0.35
DQ228799-1|ABB54752.1| 1715|Drosophila melanogaster Dicer-2 prot... 29 3.2
DQ228798-1|ABB54751.1| 1715|Drosophila melanogaster Dicer-2 prot... 29 3.2
DQ228797-1|ABB54750.1| 1715|Drosophila melanogaster Dicer-2 prot... 29 3.2
DQ228796-1|ABB54749.1| 1715|Drosophila melanogaster Dicer-2 prot... 29 3.2
DQ228795-1|ABB54748.1| 1715|Drosophila melanogaster Dicer-2 prot... 29 3.2
DQ228794-1|ABB54747.1| 1715|Drosophila melanogaster Dicer-2 prot... 29 3.2
DQ228793-1|ABB54746.1| 1715|Drosophila melanogaster Dicer-2 prot... 29 3.2
DQ228792-1|ABB54745.1| 1715|Drosophila melanogaster Dicer-2 prot... 29 3.2
BT011073-1|AAR82738.1| 1640|Drosophila melanogaster SD11113p pro... 29 3.2
AE013599-2513|AAF57830.2| 1722|Drosophila melanogaster CG6493-PA... 29 3.2
AB073024-1|BAB69959.1| 1722|Drosophila melanogaster double-stran... 29 3.2
>AY070896-1|AAL48518.1| 160|Drosophila melanogaster LP04958p
protein.
Length = 160
Score = 206 bits (503), Expect = 9e-54
Identities = 99/130 (76%), Positives = 110/130 (84%), Gaps = 4/130 (3%)
Frame = +2
Query: 14 MLMPKQNRVSIYEYLFKEGVMVAKKDYHAPKHPDLEKIPNLQVIKAMQSLKSRGYVKEQF 193
M MPK +RV+IYEYLFKEGV+VAKKD+HA KHP+LE IPNL VIKAMQSL SRG VKEQF
Sbjct: 1 MFMPKAHRVAIYEYLFKEGVIVAKKDFHAQKHPELESIPNLHVIKAMQSLHSRGLVKEQF 60
Query: 194 AWRHFYWYLTNEGIEYLRIFLHLPPEIVPATLKRSVRTETVR-RGAVGRPDAP---ARTA 361
AWRH+YWYLTNEGIE LR +LHLPPEIVP+TLKR R+ETVR R AVG P P ++T
Sbjct: 61 AWRHYYWYLTNEGIEELRSYLHLPPEIVPSTLKRPARSETVRPRPAVGGPRGPGDASKTG 120
Query: 362 EDRSAYRRAP 391
EDRSAYRRAP
Sbjct: 121 EDRSAYRRAP 130
>AE014298-2882|AAN09507.1| 160|Drosophila melanogaster CG14206-PC,
isoform C protein.
Length = 160
Score = 206 bits (503), Expect = 9e-54
Identities = 99/130 (76%), Positives = 110/130 (84%), Gaps = 4/130 (3%)
Frame = +2
Query: 14 MLMPKQNRVSIYEYLFKEGVMVAKKDYHAPKHPDLEKIPNLQVIKAMQSLKSRGYVKEQF 193
M MPK +RV+IYEYLFKEGV+VAKKD+HA KHP+LE IPNL VIKAMQSL SRG VKEQF
Sbjct: 1 MFMPKAHRVAIYEYLFKEGVIVAKKDFHAQKHPELESIPNLHVIKAMQSLHSRGLVKEQF 60
Query: 194 AWRHFYWYLTNEGIEYLRIFLHLPPEIVPATLKRSVRTETVR-RGAVGRPDAP---ARTA 361
AWRH+YWYLTNEGIE LR +LHLPPEIVP+TLKR R+ETVR R AVG P P ++T
Sbjct: 61 AWRHYYWYLTNEGIEELRSYLHLPPEIVPSTLKRPARSETVRPRPAVGGPRGPGDASKTG 120
Query: 362 EDRSAYRRAP 391
EDRSAYRRAP
Sbjct: 121 EDRSAYRRAP 130
>AE014298-2881|AAF48978.2| 160|Drosophila melanogaster CG14206-PB,
isoform B protein.
Length = 160
Score = 206 bits (503), Expect = 9e-54
Identities = 99/130 (76%), Positives = 110/130 (84%), Gaps = 4/130 (3%)
Frame = +2
Query: 14 MLMPKQNRVSIYEYLFKEGVMVAKKDYHAPKHPDLEKIPNLQVIKAMQSLKSRGYVKEQF 193
M MPK +RV+IYEYLFKEGV+VAKKD+HA KHP+LE IPNL VIKAMQSL SRG VKEQF
Sbjct: 1 MFMPKAHRVAIYEYLFKEGVIVAKKDFHAQKHPELESIPNLHVIKAMQSLHSRGLVKEQF 60
Query: 194 AWRHFYWYLTNEGIEYLRIFLHLPPEIVPATLKRSVRTETVR-RGAVGRPDAP---ARTA 361
AWRH+YWYLTNEGIE LR +LHLPPEIVP+TLKR R+ETVR R AVG P P ++T
Sbjct: 61 AWRHYYWYLTNEGIEELRSYLHLPPEIVPSTLKRPARSETVRPRPAVGGPRGPGDASKTG 120
Query: 362 EDRSAYRRAP 391
EDRSAYRRAP
Sbjct: 121 EDRSAYRRAP 130
>AE014297-4155|AAF56731.1| 163|Drosophila melanogaster CG12275-PA
protein.
Length = 163
Score = 179 bits (436), Expect = 1e-45
Identities = 88/133 (66%), Positives = 102/133 (76%), Gaps = 5/133 (3%)
Frame = +2
Query: 14 MLMPKQNRVSIYEYLFKEGVMVAKKDYHAPKHPDLEKIPNLQVIKAMQSLKSRGYVKEQF 193
M +PK NRV+IYEYLFKEGV+VAKKD KH +L+KIPNLQVIK MQSL SRG+VKEQF
Sbjct: 1 MFIPKANRVAIYEYLFKEGVLVAKKDSPIQKHSELDKIPNLQVIKVMQSLNSRGWVKEQF 60
Query: 194 AWRHFYWYLTNEGIEYLRIFLHLPPEIVPATLKRSVRTETVR-RGAVGRP----DAPART 358
AWRHFYW LTNEGIE LR +LHLPPEIVP+TL ++ R+ VR RG G P ++T
Sbjct: 61 AWRHFYWLLTNEGIEELRRYLHLPPEIVPSTLTQTTRSNAVRPRGGPGGPGGGFGGASKT 120
Query: 359 AEDRSAYRRAPPA 397
+DRS YRR P A
Sbjct: 121 DDDRSNYRRGPGA 133
>AF145693-1|AAD38668.2| 162|Drosophila melanogaster LD32148p
protein.
Length = 162
Score = 177 bits (431), Expect = 5e-45
Identities = 87/131 (66%), Positives = 101/131 (77%), Gaps = 5/131 (3%)
Frame = +2
Query: 20 MPKQNRVSIYEYLFKEGVMVAKKDYHAPKHPDLEKIPNLQVIKAMQSLKSRGYVKEQFAW 199
+PK NRV+IYEYLFKEGV+VAKKD KH +L+KIPNLQVIK MQSL SRG+VKEQFAW
Sbjct: 2 IPKANRVAIYEYLFKEGVLVAKKDSPIQKHSELDKIPNLQVIKVMQSLNSRGWVKEQFAW 61
Query: 200 RHFYWYLTNEGIEYLRIFLHLPPEIVPATLKRSVRTETVR-RGAVGRP----DAPARTAE 364
RHFYW LTNEGIE LR +LHLPPEIVP+TL ++ R+ VR RG G P ++T +
Sbjct: 62 RHFYWLLTNEGIEELRRYLHLPPEIVPSTLTQTTRSNAVRPRGGPGGPGGGFGGASKTDD 121
Query: 365 DRSAYRRAPPA 397
DRS YRR P A
Sbjct: 122 DRSNYRRGPGA 132
>AY118800-1|AAM50660.1| 255|Drosophila melanogaster GH19623p
protein.
Length = 255
Score = 31.9 bits (69), Expect = 0.35
Identities = 10/30 (33%), Positives = 19/30 (63%)
Frame = -1
Query: 261 KCRKILRYSIPSFVKYQ*KCLHANCSLTYP 172
KCR +++P+F+ + +CL C++ YP
Sbjct: 76 KCRSDPEFNVPAFIDSRKRCLSDRCAMAYP 105
>AE013599-635|AAF59104.2| 255|Drosophila melanogaster CG30362-PA
protein.
Length = 255
Score = 31.9 bits (69), Expect = 0.35
Identities = 10/30 (33%), Positives = 19/30 (63%)
Frame = -1
Query: 261 KCRKILRYSIPSFVKYQ*KCLHANCSLTYP 172
KCR +++P+F+ + +CL C++ YP
Sbjct: 76 KCRSDPEFNVPAFIDSRKRCLSDRCAMAYP 105
>DQ228799-1|ABB54752.1| 1715|Drosophila melanogaster Dicer-2
protein.
Length = 1715
Score = 28.7 bits (61), Expect = 3.2
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = -3
Query: 217 IPVKMPPCELFLNISSRFK*LHSFDHLEVRDLLEIW 110
+ V P E+ + S + + LH F + RD+L+IW
Sbjct: 772 VRVANAPLEVIIQNSEQLELLHQFHGMVFRDILKIW 807
>DQ228798-1|ABB54751.1| 1715|Drosophila melanogaster Dicer-2
protein.
Length = 1715
Score = 28.7 bits (61), Expect = 3.2
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = -3
Query: 217 IPVKMPPCELFLNISSRFK*LHSFDHLEVRDLLEIW 110
+ V P E+ + S + + LH F + RD+L+IW
Sbjct: 772 VRVANAPLEVIIQNSEQLELLHQFHGMVFRDILKIW 807
>DQ228797-1|ABB54750.1| 1715|Drosophila melanogaster Dicer-2
protein.
Length = 1715
Score = 28.7 bits (61), Expect = 3.2
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = -3
Query: 217 IPVKMPPCELFLNISSRFK*LHSFDHLEVRDLLEIW 110
+ V P E+ + S + + LH F + RD+L+IW
Sbjct: 772 VRVANAPLEVIIQNSEQLELLHQFHGMVFRDILKIW 807
>DQ228796-1|ABB54749.1| 1715|Drosophila melanogaster Dicer-2
protein.
Length = 1715
Score = 28.7 bits (61), Expect = 3.2
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = -3
Query: 217 IPVKMPPCELFLNISSRFK*LHSFDHLEVRDLLEIW 110
+ V P E+ + S + + LH F + RD+L+IW
Sbjct: 772 VRVANAPLEVIIQNSEQLELLHQFHGMVFRDILKIW 807
>DQ228795-1|ABB54748.1| 1715|Drosophila melanogaster Dicer-2
protein.
Length = 1715
Score = 28.7 bits (61), Expect = 3.2
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = -3
Query: 217 IPVKMPPCELFLNISSRFK*LHSFDHLEVRDLLEIW 110
+ V P E+ + S + + LH F + RD+L+IW
Sbjct: 772 VRVANAPLEVIIQNSEQLELLHQFHGMVFRDILKIW 807
>DQ228794-1|ABB54747.1| 1715|Drosophila melanogaster Dicer-2
protein.
Length = 1715
Score = 28.7 bits (61), Expect = 3.2
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = -3
Query: 217 IPVKMPPCELFLNISSRFK*LHSFDHLEVRDLLEIW 110
+ V P E+ + S + + LH F + RD+L+IW
Sbjct: 772 VRVANAPLEVIIQNSEQLELLHQFHGMVFRDILKIW 807
>DQ228793-1|ABB54746.1| 1715|Drosophila melanogaster Dicer-2
protein.
Length = 1715
Score = 28.7 bits (61), Expect = 3.2
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = -3
Query: 217 IPVKMPPCELFLNISSRFK*LHSFDHLEVRDLLEIW 110
+ V P E+ + S + + LH F + RD+L+IW
Sbjct: 772 VRVANAPLEVIIQNSEQLELLHQFHGMVFRDILKIW 807
>DQ228792-1|ABB54745.1| 1715|Drosophila melanogaster Dicer-2
protein.
Length = 1715
Score = 28.7 bits (61), Expect = 3.2
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = -3
Query: 217 IPVKMPPCELFLNISSRFK*LHSFDHLEVRDLLEIW 110
+ V P E+ + S + + LH F + RD+L+IW
Sbjct: 772 VRVANAPLEVIIQNSEQLELLHQFHGMVFRDILKIW 807
>BT011073-1|AAR82738.1| 1640|Drosophila melanogaster SD11113p
protein.
Length = 1640
Score = 28.7 bits (61), Expect = 3.2
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = -3
Query: 217 IPVKMPPCELFLNISSRFK*LHSFDHLEVRDLLEIW 110
+ V P E+ + S + + LH F + RD+L+IW
Sbjct: 758 VRVANAPLEVIIQNSEQLELLHQFHGMVFRDILKIW 793
>AE013599-2513|AAF57830.2| 1722|Drosophila melanogaster CG6493-PA
protein.
Length = 1722
Score = 28.7 bits (61), Expect = 3.2
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = -3
Query: 217 IPVKMPPCELFLNISSRFK*LHSFDHLEVRDLLEIW 110
+ V P E+ + S + + LH F + RD+L+IW
Sbjct: 779 VRVANAPLEVIIQNSEQLELLHQFHGMVFRDILKIW 814
>AB073024-1|BAB69959.1| 1722|Drosophila melanogaster
double-strand-specific ribonucleaseprotein.
Length = 1722
Score = 28.7 bits (61), Expect = 3.2
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = -3
Query: 217 IPVKMPPCELFLNISSRFK*LHSFDHLEVRDLLEIW 110
+ V P E+ + S + + LH F + RD+L+IW
Sbjct: 779 VRVANAPLEVIIQNSEQLELLHQFHGMVFRDILKIW 814
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,936,354
Number of Sequences: 53049
Number of extensions: 345549
Number of successful extensions: 1008
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 996
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1003
length of database: 24,988,368
effective HSP length: 78
effective length of database: 20,850,546
effective search space used: 1230182214
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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