Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0022_G02
         (181 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    21   1.4  
DQ026032-1|AAY87891.1|  566|Apis mellifera nicotinic acetylcholi...    20   2.4  
DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor pro...    19   5.5  
DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor pro...    19   5.5  
AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled rec...    19   5.5  
AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    19   7.2  
AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase pr...    19   7.2  
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    19   7.2  
DQ288392-1|ABC41342.1|  120|Apis mellifera nanos protein.              18   9.6  

>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 21.0 bits (42), Expect = 1.4
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = +3

Query: 54  SFLVAHFLYLSSKCRPLLY 110
           +++   F YLS+   PLLY
Sbjct: 330 TYMSGVFYYLSTTVNPLLY 348


>DQ026032-1|AAY87891.1|  566|Apis mellifera nicotinic acetylcholine
           receptor alpha3subunit protein.
          Length = 566

 Score = 20.2 bits (40), Expect = 2.4
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = -2

Query: 111 HTKADDISTRDKEN 70
           HTK ++ STR KE+
Sbjct: 492 HTKREEDSTRVKED 505


>DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 19.0 bits (37), Expect = 5.5
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = +3

Query: 96  RPLLYVQDFFFKS 134
           RPL  VQ+FF  S
Sbjct: 65  RPLRIVQNFFIVS 77


>DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 19.0 bits (37), Expect = 5.5
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = +3

Query: 96  RPLLYVQDFFFKS 134
           RPL  VQ+FF  S
Sbjct: 65  RPLRIVQNFFIVS 77


>AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled
           receptor protein.
          Length = 399

 Score = 19.0 bits (37), Expect = 5.5
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = +3

Query: 96  RPLLYVQDFFFKS 134
           RPL  VQ+FF  S
Sbjct: 65  RPLRIVQNFFIVS 77


>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 18.6 bits (36), Expect = 7.2
 Identities = 9/22 (40%), Positives = 11/22 (50%)
 Frame = -1

Query: 172 TYVPTYIVALSLSDLKKKSCTY 107
           T + T  VA+SLS      C Y
Sbjct: 735 TQITTLCVAISLSATVTLVCLY 756


>AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase
           protein.
          Length = 342

 Score = 18.6 bits (36), Expect = 7.2
 Identities = 11/41 (26%), Positives = 18/41 (43%)
 Frame = -3

Query: 125 KKILYIQKRTTFRREIKKMSHKKGKTHSLYWTPRRNPRAEF 3
           K++ Y+QK  T+     K  H   + +S     +RN    F
Sbjct: 105 KQLGYVQKLDTWVPHELKEKHLTQRINSCDLLKKRNENDPF 145


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 18.6 bits (36), Expect = 7.2
 Identities = 9/22 (40%), Positives = 11/22 (50%)
 Frame = -1

Query: 172 TYVPTYIVALSLSDLKKKSCTY 107
           T + T  VA+SLS      C Y
Sbjct: 825 TQITTLCVAISLSATVTLVCLY 846


>DQ288392-1|ABC41342.1|  120|Apis mellifera nanos protein.
          Length = 120

 Score = 18.2 bits (35), Expect = 9.6
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = +3

Query: 114 QDFFFKSDSDNATM 155
           +DF +  D DN TM
Sbjct: 9   RDFEYCPDLDNVTM 22


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 47,575
Number of Sequences: 438
Number of extensions: 719
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 39
effective length of database: 129,261
effective search space used:  2585220
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (18.9 bits)