Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0022_G01
         (264 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            24   1.1  
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.            24   1.1  
AF364130-1|AAL35506.1|  417|Anopheles gambiae putative odorant r...    23   1.4  
AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.    21   7.6  

>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 23.8 bits (49), Expect = 1.1
 Identities = 13/36 (36%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
 Frame = +1

Query: 139  RNI*RSFKNVFYKEKLRQVPTNLQEL-NSSTNKQDH 243
            RNI    +N+F+K+K  Q    +  L +S  +KQ H
Sbjct: 3168 RNIASGLRNLFFKKKPEQQAHEVSTLEHSQIDKQFH 3203


>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
          Length = 3318

 Score = 23.8 bits (49), Expect = 1.1
 Identities = 13/36 (36%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
 Frame = +1

Query: 139  RNI*RSFKNVFYKEKLRQVPTNLQEL-NSSTNKQDH 243
            RNI    +N+F+K+K  Q    +  L +S  +KQ H
Sbjct: 3171 RNIASGLRNLFFKKKPEQQAHEVSTLEHSQIDKQFH 3206


>AF364130-1|AAL35506.1|  417|Anopheles gambiae putative odorant
           receptor Or1 protein.
          Length = 417

 Score = 23.4 bits (48), Expect = 1.4
 Identities = 14/53 (26%), Positives = 21/53 (39%)
 Frame = +2

Query: 53  TYLVAFRRYLKPFKNLFNTKYFLNKILHNEIFEEVSKMFSTKKSLDKFLQIYK 211
           T  V F  Y K  K       F  ++   ++  +V  +     +L  FLQI K
Sbjct: 350 TEFVGFSNYFKFDKRTSQAMIFFLQMTLKDVHIKVGSVLKVTLNLHTFLQIMK 402


>AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.
          Length = 1133

 Score = 21.0 bits (42), Expect = 7.6
 Identities = 8/24 (33%), Positives = 15/24 (62%)
 Frame = +1

Query: 175 KEKLRQVPTNLQELNSSTNKQDHK 246
           +++  Q+   L ELNS+  K+D +
Sbjct: 715 QQRREQLQRELNELNSAYAKEDER 738


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 227,136
Number of Sequences: 2352
Number of extensions: 3199
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 563,979
effective HSP length: 54
effective length of database: 436,971
effective search space used: 14420043
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)