Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0022_G01
         (264 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT021306-1|AAX33454.1|  745|Drosophila melanogaster RE19569p pro...    27   3.6  
BT016114-1|AAV36999.1|  949|Drosophila melanogaster LD10780p pro...    26   6.3  
AE013599-1182|AAF58744.1|  949|Drosophila melanogaster CG12325-P...    26   6.3  

>BT021306-1|AAX33454.1|  745|Drosophila melanogaster RE19569p
           protein.
          Length = 745

 Score = 27.1 bits (57), Expect = 3.6
 Identities = 13/44 (29%), Positives = 24/44 (54%)
 Frame = +2

Query: 119 LNKILHNEIFEEVSKMFSTKKSLDKFLQIYKN*IRRQISKTTSV 250
           L+ +   ++  E+S++  +  ++DK LQ Y N     I K TS+
Sbjct: 235 LSYVAMTQVTSELSELRDSTDNIDKKLQFYINIASENIGKMTSM 278


>BT016114-1|AAV36999.1|  949|Drosophila melanogaster LD10780p
           protein.
          Length = 949

 Score = 26.2 bits (55), Expect = 6.3
 Identities = 11/34 (32%), Positives = 22/34 (64%)
 Frame = -1

Query: 171 ENIFETSSNISLCKILFKKYFVLNKFLNGFKYRL 70
           + +F+ +  ++L ++L +KY +LNK  +  KY L
Sbjct: 857 DGVFQHTGLLALHEVLSRKYEMLNKICDYNKYTL 890


>AE013599-1182|AAF58744.1|  949|Drosophila melanogaster CG12325-PA
           protein.
          Length = 949

 Score = 26.2 bits (55), Expect = 6.3
 Identities = 11/34 (32%), Positives = 22/34 (64%)
 Frame = -1

Query: 171 ENIFETSSNISLCKILFKKYFVLNKFLNGFKYRL 70
           + +F+ +  ++L ++L +KY +LNK  +  KY L
Sbjct: 857 DGVFQHTGLLALHEVLSRKYEMLNKICDYNKYTL 890


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,168,810
Number of Sequences: 53049
Number of extensions: 134628
Number of successful extensions: 351
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 351
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 351
length of database: 24,988,368
effective HSP length: 66
effective length of database: 21,487,134
effective search space used: 451229814
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)