Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0022_F24
(308 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC006672-4|AAK84542.1| 151|Caenorhabditis elegans Hypothetical ... 83 4e-17
AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA ... 64 2e-11
AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line hel... 64 2e-11
U80837-3|AAB37904.2| 384|Caenorhabditis elegans Hypothetical pr... 60 2e-10
U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein. 60 2e-10
U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GL... 60 2e-10
AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line he... 60 2e-10
U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase pr... 59 5e-10
L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase pr... 59 5e-10
AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line hel... 59 5e-10
U15406-1|AAA50456.1| 2272|Caenorhabditis elegans gag, pol and en... 44 3e-05
L23646-13|AAA28035.2| 2175|Caenorhabditis elegans C. elegans RET... 44 3e-05
L23646-12|AAL02516.1| 2186|Caenorhabditis elegans C. elegans RET... 44 3e-05
Z68297-6|CAE45045.1| 302|Caenorhabditis elegans Hypothetical pr... 42 1e-04
AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA ... 42 1e-04
AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line hel... 42 1e-04
Z81494-3|CAB61009.1| 196|Caenorhabditis elegans Hypothetical pr... 40 4e-04
Z81494-2|CAB61008.1| 227|Caenorhabditis elegans Hypothetical pr... 40 4e-04
U75915-1|AAB49759.1| 227|Caenorhabditis elegans Lin-28 protein. 40 4e-04
U75912-1|AAC47476.1| 227|Caenorhabditis elegans LIN-28 protein. 40 4e-04
AC006672-5|AAM98003.1| 42|Caenorhabditis elegans Hypothetical ... 39 6e-04
AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical... 38 0.001
AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein p... 38 0.001
AF016670-8|AAB66101.1| 783|Caenorhabditis elegans Hypothetical ... 35 0.013
U21322-3|AAA62541.1| 1425|Caenorhabditis elegans Hypothetical pr... 34 0.023
Z92828-7|CAE48500.1| 700|Caenorhabditis elegans Hypothetical pr... 33 0.031
Z81561-2|CAB04551.2| 700|Caenorhabditis elegans Hypothetical pr... 33 0.031
L12018-4|AAK68342.1| 456|Caenorhabditis elegans Dnaj domain (pr... 33 0.054
L12018-3|AAK68343.1| 446|Caenorhabditis elegans Dnaj domain (pr... 33 0.054
AF342986-1|AAL73338.1| 700|Caenorhabditis elegans KAL-1 protein. 31 0.12
Z54236-5|CAA90980.1| 386|Caenorhabditis elegans Hypothetical pr... 31 0.22
U20861-8|AAA62297.3| 372|Caenorhabditis elegans Hypothetical pr... 31 0.22
AF077533-3|AAC64626.1| 1023|Caenorhabditis elegans Hypothetical ... 31 0.22
Z70286-6|CAA94293.1| 3672|Caenorhabditis elegans Hypothetical pr... 30 0.29
Z70286-5|CAB61016.1| 3704|Caenorhabditis elegans Hypothetical pr... 30 0.29
AB016806-1|BAA32347.1| 3704|Caenorhabditis elegans laminin alpha... 30 0.29
AB001074-1|BAA19229.1| 3704|Caenorhabditis elegans laminin alpha... 30 0.29
U62281-1|AAD09363.1| 925|Caenorhabditis elegans lipoprotein rec... 30 0.38
Z81071-6|CAB03010.1| 464|Caenorhabditis elegans Hypothetical pr... 29 0.50
Z69302-8|CAA93261.3| 420|Caenorhabditis elegans Hypothetical pr... 29 0.50
AL132952-16|CAC70119.1| 107|Caenorhabditis elegans Hypothetical... 29 0.50
AC084159-15|AAK39353.1| 418|Caenorhabditis elegans Hypothetical... 29 0.50
U62639-1|AAD09364.1| 925|Caenorhabditis elegans lr protein. 29 0.66
AF185706-1|AAD56241.1| 925|Caenorhabditis elegans yolk receptor... 29 0.66
AF036703-1|AAB88554.3| 925|Caenorhabditis elegans Receptor medi... 29 0.66
AF016439-2|AAB65897.1| 176|Caenorhabditis elegans Hypothetical ... 29 0.87
AC024794-1|AAK68497.1| 994|Caenorhabditis elegans Hypothetical ... 29 0.87
Z73907-1|CAA98124.1| 4753|Caenorhabditis elegans Hypothetical pr... 28 1.2
M96150-1|AAA28105.1| 4753|Caenorhabditis elegans LDL receptor-re... 28 1.2
AL031630-5|CAA20985.1| 915|Caenorhabditis elegans Hypothetical ... 28 1.2
Z81496-9|CAB04065.1| 153|Caenorhabditis elegans Hypothetical pr... 28 1.5
U80847-7|AAO91744.1| 778|Caenorhabditis elegans Hypothetical pr... 28 1.5
U80847-6|AAK68190.1| 796|Caenorhabditis elegans Hypothetical pr... 28 1.5
U80847-5|AAK68189.1| 793|Caenorhabditis elegans Hypothetical pr... 28 1.5
Z54281-2|CAA91045.3| 399|Caenorhabditis elegans Hypothetical pr... 27 2.0
U00035-3|AAA50645.1| 548|Caenorhabditis elegans Egg sterile (un... 27 2.0
AL132895-2|CAC14404.1| 613|Caenorhabditis elegans Hypothetical ... 27 2.0
AL117193-10|CAB60304.1| 337|Caenorhabditis elegans Hypothetical... 27 2.0
U80955-3|AAM97944.1| 95|Caenorhabditis elegans Mlp/crp family ... 27 2.7
U80955-1|AAM97945.1| 113|Caenorhabditis elegans Mlp/crp family ... 27 2.7
AF100656-7|AAF99964.2| 615|Caenorhabditis elegans Hypothetical ... 27 2.7
AF025471-8|AAB71060.1| 1019|Caenorhabditis elegans Hypothetical ... 27 2.7
Z81491-10|CAB04023.3| 282|Caenorhabditis elegans Hypothetical p... 27 3.5
Z75545-3|CAA99886.1| 922|Caenorhabditis elegans Hypothetical pr... 27 3.5
Z49129-1|CAA88962.1| 262|Caenorhabditis elegans Hypothetical pr... 27 3.5
AL117207-11|CAD54173.1| 97|Caenorhabditis elegans Hypothetical... 27 3.5
AL021448-1|CAA16276.2| 898|Caenorhabditis elegans Hypothetical ... 27 3.5
AF233290-1|AAF62516.1| 898|Caenorhabditis elegans maternal-effe... 27 3.5
AC024809-9|AAO12399.1| 700|Caenorhabditis elegans Hypothetical ... 27 3.5
AC024809-8|AAF59546.2| 741|Caenorhabditis elegans Hypothetical ... 27 3.5
Z81532-7|CAJ34990.1| 363|Caenorhabditis elegans Hypothetical pr... 26 4.7
Z81532-6|CAB04326.3| 1128|Caenorhabditis elegans Hypothetical pr... 26 4.7
Z30974-5|CAH19087.1| 3183|Caenorhabditis elegans Hypothetical pr... 26 4.7
Z30974-4|CAA83226.2| 3767|Caenorhabditis elegans Hypothetical pr... 26 4.7
Z30423-15|CAH19103.1| 3183|Caenorhabditis elegans Hypothetical p... 26 4.7
Z30423-14|CAC42345.1| 3767|Caenorhabditis elegans Hypothetical p... 26 4.7
U97017-1|AAB52363.1| 2643|Caenorhabditis elegans Temporarily ass... 26 4.7
U28971-1|AAA68376.2| 551|Caenorhabditis elegans Egg sterile (un... 26 4.7
AF139060-1|AAD29428.1| 3767|Caenorhabditis elegans transmembrane... 26 4.7
AF039047-12|AAM15590.1| 226|Caenorhabditis elegans Hypothetical... 26 4.7
Z72510-3|CAA96653.1| 366|Caenorhabditis elegans Hypothetical pr... 23 5.5
Z99270-3|CAL64001.1| 98|Caenorhabditis elegans Hypothetical pr... 26 6.2
Z82258-5|CAL63989.1| 98|Caenorhabditis elegans Hypothetical pr... 26 6.2
Z78019-5|CAB01455.1| 305|Caenorhabditis elegans Hypothetical pr... 26 6.2
Z71181-6|CAA94899.1| 647|Caenorhabditis elegans Hypothetical pr... 26 6.2
U88314-8|AAF99888.1| 249|Caenorhabditis elegans Pharyngeal glan... 26 6.2
U40933-1|AAA81672.1| 699|Caenorhabditis elegans Bbs (bardet-bie... 26 6.2
U29096-4|AAA68408.1| 1599|Caenorhabditis elegans Hypothetical pr... 26 6.2
U21302-2|AAA92287.1| 305|Caenorhabditis elegans RNP-1 protein. 26 6.2
Z81125-10|CAB03385.3| 3102|Caenorhabditis elegans Hypothetical p... 25 8.1
Z79696-1|CAB01972.1| 1584|Caenorhabditis elegans Hypothetical pr... 25 8.1
AL008585-1|CAA15432.3| 3102|Caenorhabditis elegans Hypothetical ... 25 8.1
AF099919-1|AAC68793.1| 273|Caenorhabditis elegans Hypothetical ... 25 8.1
AF074902-1|AAC26793.1| 3102|Caenorhabditis elegans laminin alpha... 25 8.1
AF016668-3|AAO12441.1| 126|Caenorhabditis elegans Hypothetical ... 25 8.1
AC006827-4|AAF60881.1| 579|Caenorhabditis elegans Hypothetical ... 25 8.1
>AC006672-4|AAK84542.1| 151|Caenorhabditis elegans Hypothetical
protein K08D12.3a protein.
Length = 151
Score = 83.0 bits (196), Expect = 4e-17
Identities = 46/115 (40%), Positives = 55/115 (47%), Gaps = 29/115 (25%)
Frame = +2
Query: 47 CYRCNGTGHIARECAQSPDEP----------SCYNCNKTGHIARNCP----EGG------ 166
CY C TGH +R+C + SCYNC GH +R+CP EGG
Sbjct: 37 CYNCQETGHFSRDCPKGGSGGGQRGGGGGGGSCYNCGGRGHYSRDCPSARSEGGSGGYGG 96
Query: 167 -----RDNSNQTCYNCNKSGHISRNCPDG----TKTCYVCGKPGHISRDCDEERN 304
R Q CYNC +SGHISR C + K CY C + GHISRDC + N
Sbjct: 97 RGGEGRSFGGQKCYNCGRSGHISRECTESGSAEEKRCYQCQETGHISRDCPSQTN 151
Score = 79.8 bits (188), Expect = 4e-16
Identities = 44/123 (35%), Positives = 59/123 (47%), Gaps = 37/123 (30%)
Frame = +2
Query: 38 ADR-CYRCNGTGHIARECAQSPDE---------PSCYNCNKTGHIARNCPEGGRDNSNQ- 184
+DR CY+C GHI+R C + +CYNC +TGH +R+CP+GG +
Sbjct: 2 SDRNCYKCQQPGHISRNCPNGESDGGRRGGGGGSTCYNCQETGHFSRDCPKGGSGGGQRG 61
Query: 185 ------TCYNCNKSGHISRNCPD--------------------GTKTCYVCGKPGHISRD 286
+CYNC GH SR+CP G + CY CG+ GHISR+
Sbjct: 62 GGGGGGSCYNCGGRGHYSRDCPSARSEGGSGGYGGRGGEGRSFGGQKCYNCGRSGHISRE 121
Query: 287 CDE 295
C E
Sbjct: 122 CTE 124
Score = 74.5 bits (175), Expect = 1e-14
Identities = 35/83 (42%), Positives = 44/83 (53%), Gaps = 18/83 (21%)
Frame = +2
Query: 110 SCYNCNKTGHIARNCPEGGRDNSNQ------TCYNCNKSGHISRNCPDGTK--------- 244
+CY C + GHI+RNCP G D + TCYNC ++GH SR+CP G
Sbjct: 5 NCYKCQQPGHISRNCPNGESDGGRRGGGGGSTCYNCQETGHFSRDCPKGGSGGGQRGGGG 64
Query: 245 ---TCYVCGKPGHISRDCDEERN 304
+CY CG GH SRDC R+
Sbjct: 65 GGGSCYNCGGRGHYSRDCPSARS 87
Score = 57.6 bits (133), Expect = 2e-09
Identities = 21/40 (52%), Positives = 29/40 (72%), Gaps = 2/40 (5%)
Frame = +2
Query: 44 RCYRCNGTGHIARECAQ--SPDEPSCYNCNKTGHIARNCP 157
+CY C +GHI+REC + S +E CY C +TGHI+R+CP
Sbjct: 108 KCYNCGRSGHISRECTESGSAEEKRCYQCQETGHISRDCP 147
Score = 40.3 bits (90), Expect = 3e-04
Identities = 16/31 (51%), Positives = 21/31 (67%), Gaps = 4/31 (12%)
Frame = +2
Query: 8 GHFARDCKE----EADRCYRCNGTGHIAREC 88
GH +R+C E E RCY+C TGHI+R+C
Sbjct: 116 GHISRECTESGSAEEKRCYQCQETGHISRDC 146
>AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA
helicase-4 protein.
Length = 1156
Score = 64.1 bits (149), Expect = 2e-11
Identities = 35/99 (35%), Positives = 46/99 (46%), Gaps = 6/99 (6%)
Frame = +2
Query: 23 DCKEEADRCYRCNGTGHIARECAQSPDEPS--CYNCNKTGHIARNCPEGGRDNSNQTCYN 196
D E C+ C GHI++EC P P C NC + GH A +C + C N
Sbjct: 564 DGGERPRGCHNCGEEGHISKEC-DKPKVPRFPCRNCEQLGHFASDCDQPRVPRG--PCRN 620
Query: 197 CNKSGHISRNCPDGTKT----CYVCGKPGHISRDCDEER 301
C GH + +C D K C CG+ GH ++DC ER
Sbjct: 621 CGIEGHFAVDC-DQPKVPRGPCRNCGQEGHFAKDCQNER 658
Score = 55.6 bits (128), Expect = 7e-09
Identities = 31/85 (36%), Positives = 38/85 (44%), Gaps = 6/85 (7%)
Frame = +2
Query: 8 GHFARDCKEEA---DRCYRCNGTGHIARECAQSPDEPS--CYNCNKTGHIARNCP-EGGR 169
GHFA DC + C C GH A +C Q P P C NC + GH A++C E R
Sbjct: 602 GHFASDCDQPRVPRGPCRNCGIEGHFAVDCDQ-PKVPRGPCRNCGQEGHFAKDCQNERVR 660
Query: 170 DNSNQTCYNCNKSGHISRNCPDGTK 244
+ C C + GH CP K
Sbjct: 661 MEPTEPCRRCAEEGHWGYECPTRPK 685
Score = 43.2 bits (97), Expect = 4e-05
Identities = 24/64 (37%), Positives = 28/64 (43%), Gaps = 8/64 (12%)
Frame = +2
Query: 5 EGHFARDC---KEEADRCYRCNGTGHIAREC-----AQSPDEPSCYNCNKTGHIARNCPE 160
EGHFA DC K C C GH A++C P EP C C + GH CP
Sbjct: 624 EGHFAVDCDQPKVPRGPCRNCGQEGHFAKDCQNERVRMEPTEP-CRRCAEEGHWGYECPT 682
Query: 161 GGRD 172
+D
Sbjct: 683 RPKD 686
>AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line
helicase protein 4 protein.
Length = 1156
Score = 64.1 bits (149), Expect = 2e-11
Identities = 35/99 (35%), Positives = 46/99 (46%), Gaps = 6/99 (6%)
Frame = +2
Query: 23 DCKEEADRCYRCNGTGHIARECAQSPDEPS--CYNCNKTGHIARNCPEGGRDNSNQTCYN 196
D E C+ C GHI++EC P P C NC + GH A +C + C N
Sbjct: 564 DGGERPRGCHNCGEEGHISKEC-DKPKVPRFPCRNCEQLGHFASDCDQPRVPRG--PCRN 620
Query: 197 CNKSGHISRNCPDGTKT----CYVCGKPGHISRDCDEER 301
C GH + +C D K C CG+ GH ++DC ER
Sbjct: 621 CGIEGHFAVDC-DQPKVPRGPCRNCGQEGHFAKDCQNER 658
Score = 55.6 bits (128), Expect = 7e-09
Identities = 31/85 (36%), Positives = 38/85 (44%), Gaps = 6/85 (7%)
Frame = +2
Query: 8 GHFARDCKEEA---DRCYRCNGTGHIARECAQSPDEPS--CYNCNKTGHIARNCP-EGGR 169
GHFA DC + C C GH A +C Q P P C NC + GH A++C E R
Sbjct: 602 GHFASDCDQPRVPRGPCRNCGIEGHFAVDCDQ-PKVPRGPCRNCGQEGHFAKDCQNERVR 660
Query: 170 DNSNQTCYNCNKSGHISRNCPDGTK 244
+ C C + GH CP K
Sbjct: 661 MEPTEPCRRCAEEGHWGYECPTRPK 685
Score = 43.2 bits (97), Expect = 4e-05
Identities = 24/64 (37%), Positives = 28/64 (43%), Gaps = 8/64 (12%)
Frame = +2
Query: 5 EGHFARDC---KEEADRCYRCNGTGHIAREC-----AQSPDEPSCYNCNKTGHIARNCPE 160
EGHFA DC K C C GH A++C P EP C C + GH CP
Sbjct: 624 EGHFAVDCDQPKVPRGPCRNCGQEGHFAKDCQNERVRMEPTEP-CRRCAEEGHWGYECPT 682
Query: 161 GGRD 172
+D
Sbjct: 683 RPKD 686
>U80837-3|AAB37904.2| 384|Caenorhabditis elegans Hypothetical
protein F07E5.5 protein.
Length = 384
Score = 60.5 bits (140), Expect = 2e-10
Identities = 34/104 (32%), Positives = 46/104 (44%), Gaps = 12/104 (11%)
Frame = +2
Query: 20 RDCKEEADRCYRCNGTGHIARECAQ---SPDEPSCYNCNKTGHIARNCPEGG-RDNSNQT 187
+D K C+ C GH +C + S + C+ C H C + G + T
Sbjct: 222 QDQKITGSACFHCREPGHRLADCPKRNSSSSDGVCFKCGSMEHSIHECKKKGVKGFPYAT 281
Query: 188 CYNCNKSGHISRNC--------PDGTKTCYVCGKPGHISRDCDE 295
C+ C + GHISR+C PDG C VCG H+ RDC E
Sbjct: 282 CFVCKQVGHISRDCHQNVNGVYPDG-GCCNVCGANTHLRRDCPE 324
Score = 58.0 bits (134), Expect = 1e-09
Identities = 25/71 (35%), Positives = 37/71 (52%), Gaps = 6/71 (8%)
Frame = +2
Query: 110 SCYNCNKTGHIARNCPEGGRDNSNQTCYNCNKSGHISRNC-PDGTK-----TCYVCGKPG 271
+C++C + GH +CP+ +S+ C+ C H C G K TC+VC + G
Sbjct: 230 ACFHCREPGHRLADCPKRNSSSSDGVCFKCGSMEHSIHECKKKGVKGFPYATCFVCKQVG 289
Query: 272 HISRDCDEERN 304
HISRDC + N
Sbjct: 290 HISRDCHQNVN 300
>U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein.
Length = 974
Score = 60.5 bits (140), Expect = 2e-10
Identities = 36/109 (33%), Positives = 49/109 (44%), Gaps = 15/109 (13%)
Frame = +2
Query: 8 GHFARDC----KEEADR-CYRCNGTGHIARECAQS--PDE-----PSCYNCNKTGHIARN 151
GH + DC KE R CY C GH +R+C + P E S + G
Sbjct: 380 GHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEERKPREGRNGFTSGFGGGNDGGFGGG 439
Query: 152 CPEGGRDNSNQ---TCYNCNKSGHISRNCPDGTKTCYVCGKPGHISRDC 289
EG +N + C+NC GH S CP+ + C+ CG+ GH S +C
Sbjct: 440 NAEGFGNNEERGPMKCFNCKGEGHRSAECPEPPRGCFNCGEQGHRSNEC 488
Score = 57.6 bits (133), Expect = 2e-09
Identities = 26/54 (48%), Positives = 32/54 (59%), Gaps = 7/54 (12%)
Frame = +2
Query: 161 GGRDNS--NQTCYNCNKSGHISRNCPDGTK-----TCYVCGKPGHISRDCDEER 301
GG+D N C+NC + GH S +CP+ K CY C +PGH SRDC EER
Sbjct: 248 GGQDRGERNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEER 301
Score = 57.6 bits (133), Expect = 2e-09
Identities = 19/45 (42%), Positives = 30/45 (66%)
Frame = +2
Query: 110 SCYNCNKTGHIARNCPEGGRDNSNQTCYNCNKSGHISRNCPDGTK 244
+C+NC + GH + +CPE ++ + CYNC + GH SR+CP+ K
Sbjct: 258 NCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEERK 302
Score = 57.6 bits (133), Expect = 2e-09
Identities = 26/54 (48%), Positives = 32/54 (59%), Gaps = 7/54 (12%)
Frame = +2
Query: 161 GGRDNS--NQTCYNCNKSGHISRNCPDGTK-----TCYVCGKPGHISRDCDEER 301
GG+D N C+NC + GH S +CP+ K CY C +PGH SRDC EER
Sbjct: 362 GGQDRGERNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEER 415
Score = 57.6 bits (133), Expect = 2e-09
Identities = 19/45 (42%), Positives = 30/45 (66%)
Frame = +2
Query: 110 SCYNCNKTGHIARNCPEGGRDNSNQTCYNCNKSGHISRNCPDGTK 244
+C+NC + GH + +CPE ++ + CYNC + GH SR+CP+ K
Sbjct: 372 NCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEERK 416
Score = 50.4 bits (115), Expect = 3e-07
Identities = 30/111 (27%), Positives = 43/111 (38%), Gaps = 15/111 (13%)
Frame = +2
Query: 8 GHFARDCKEEADRCYRCNGTGHIARECAQSPDEPS---CYNCNKTGHIARNCPE------ 160
G +D E + C+ C GH + +C + E CYNC + GH +R+CPE
Sbjct: 360 GGGGQDRGERNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEERKPRE 419
Query: 161 ------GGRDNSNQTCYNCNKSGHISRNCPDGTKTCYVCGKPGHISRDCDE 295
G N + + N G C+ C GH S +C E
Sbjct: 420 GRNGFTSGFGGGNDGGFGGGNAEGFGNNEERGPMKCFNCKGEGHRSAECPE 470
Score = 48.0 bits (109), Expect = 1e-06
Identities = 21/71 (29%), Positives = 33/71 (46%), Gaps = 3/71 (4%)
Frame = +2
Query: 8 GHFARDCKEEADRCYRCNGTGHIARECAQSPDEPS---CYNCNKTGHIARNCPEGGRDNS 178
G +D E + C+ C GH + +C + E CYNC + GH +R+CPE +
Sbjct: 246 GGGGQDRGERNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEERKPRE 305
Query: 179 NQTCYNCNKSG 211
+ + SG
Sbjct: 306 GRNGFTGGSSG 316
Score = 44.4 bits (100), Expect = 2e-05
Identities = 18/44 (40%), Positives = 23/44 (52%)
Frame = +2
Query: 113 CYNCNKTGHIARNCPEGGRDNSNQTCYNCNKSGHISRNCPDGTK 244
C+NC GH + CPE R C+NC + GH S CP+ K
Sbjct: 455 CFNCKGEGHRSAECPEPPRG-----CFNCGEQGHRSNECPNPAK 493
Score = 32.7 bits (71), Expect = 0.054
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = +2
Query: 5 EGHFARDCKEEADRCYRCNGTGHIARECAQSPDEP 109
EGH + +C E C+ C GH + EC +P +P
Sbjct: 461 EGHRSAECPEPPRGCFNCGEQGHRSNEC-PNPAKP 494
Score = 31.1 bits (67), Expect = 0.16
Identities = 34/125 (27%), Positives = 47/125 (37%), Gaps = 27/125 (21%)
Frame = +2
Query: 8 GHFARDC----KEEADR-CYRCNGTGHIARECAQS--PDE--------PSCY---NCNKT 133
GH + DC KE R CY C GH +R+C + P E S + N T
Sbjct: 266 GHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEERKPREGRNGFTGGSSGFGGGNGGGT 325
Query: 134 GHIARNCPEGGRDNSNQTCYNCNKSGHISRNCPDG---------TKTCYVCGKPGHISRD 286
G + G N+ ++ + G S G C+ C +PGH S D
Sbjct: 326 GFDSGLTNGFGSGNNGESGFGSGGFGGNSNGFGSGGGGQDRGERNNNCFNCQQPGHRSND 385
Query: 287 CDEER 301
C E +
Sbjct: 386 CPEPK 390
Score = 28.3 bits (60), Expect = 1.2
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = +2
Query: 206 SGHISRNCPDGTKTCYVCGKPGHISRDCDEER 301
SG ++ + C+ C +PGH S DC E +
Sbjct: 245 SGGGGQDRGERNNNCFNCQQPGHRSNDCPEPK 276
>U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GLH-2
protein.
Length = 974
Score = 60.5 bits (140), Expect = 2e-10
Identities = 36/109 (33%), Positives = 49/109 (44%), Gaps = 15/109 (13%)
Frame = +2
Query: 8 GHFARDC----KEEADR-CYRCNGTGHIARECAQS--PDE-----PSCYNCNKTGHIARN 151
GH + DC KE R CY C GH +R+C + P E S + G
Sbjct: 380 GHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEERKPREGRNGFTSGFGGGNDGGFGGG 439
Query: 152 CPEGGRDNSNQ---TCYNCNKSGHISRNCPDGTKTCYVCGKPGHISRDC 289
EG +N + C+NC GH S CP+ + C+ CG+ GH S +C
Sbjct: 440 NAEGFGNNEERGPMKCFNCKGEGHRSAECPEPPRGCFNCGEQGHRSNEC 488
Score = 57.6 bits (133), Expect = 2e-09
Identities = 26/54 (48%), Positives = 32/54 (59%), Gaps = 7/54 (12%)
Frame = +2
Query: 161 GGRDNS--NQTCYNCNKSGHISRNCPDGTK-----TCYVCGKPGHISRDCDEER 301
GG+D N C+NC + GH S +CP+ K CY C +PGH SRDC EER
Sbjct: 248 GGQDRGERNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEER 301
Score = 57.6 bits (133), Expect = 2e-09
Identities = 19/45 (42%), Positives = 30/45 (66%)
Frame = +2
Query: 110 SCYNCNKTGHIARNCPEGGRDNSNQTCYNCNKSGHISRNCPDGTK 244
+C+NC + GH + +CPE ++ + CYNC + GH SR+CP+ K
Sbjct: 258 NCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEERK 302
Score = 57.6 bits (133), Expect = 2e-09
Identities = 26/54 (48%), Positives = 32/54 (59%), Gaps = 7/54 (12%)
Frame = +2
Query: 161 GGRDNS--NQTCYNCNKSGHISRNCPDGTK-----TCYVCGKPGHISRDCDEER 301
GG+D N C+NC + GH S +CP+ K CY C +PGH SRDC EER
Sbjct: 362 GGQDRGERNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEER 415
Score = 57.6 bits (133), Expect = 2e-09
Identities = 19/45 (42%), Positives = 30/45 (66%)
Frame = +2
Query: 110 SCYNCNKTGHIARNCPEGGRDNSNQTCYNCNKSGHISRNCPDGTK 244
+C+NC + GH + +CPE ++ + CYNC + GH SR+CP+ K
Sbjct: 372 NCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEERK 416
Score = 50.4 bits (115), Expect = 3e-07
Identities = 30/111 (27%), Positives = 43/111 (38%), Gaps = 15/111 (13%)
Frame = +2
Query: 8 GHFARDCKEEADRCYRCNGTGHIARECAQSPDEPS---CYNCNKTGHIARNCPE------ 160
G +D E + C+ C GH + +C + E CYNC + GH +R+CPE
Sbjct: 360 GGGGQDRGERNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEERKPRE 419
Query: 161 ------GGRDNSNQTCYNCNKSGHISRNCPDGTKTCYVCGKPGHISRDCDE 295
G N + + N G C+ C GH S +C E
Sbjct: 420 GRNGFTSGFGGGNDGGFGGGNAEGFGNNEERGPMKCFNCKGEGHRSAECPE 470
Score = 48.0 bits (109), Expect = 1e-06
Identities = 21/71 (29%), Positives = 33/71 (46%), Gaps = 3/71 (4%)
Frame = +2
Query: 8 GHFARDCKEEADRCYRCNGTGHIARECAQSPDEPS---CYNCNKTGHIARNCPEGGRDNS 178
G +D E + C+ C GH + +C + E CYNC + GH +R+CPE +
Sbjct: 246 GGGGQDRGERNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEERKPRE 305
Query: 179 NQTCYNCNKSG 211
+ + SG
Sbjct: 306 GRNGFTGGSSG 316
Score = 44.4 bits (100), Expect = 2e-05
Identities = 18/44 (40%), Positives = 23/44 (52%)
Frame = +2
Query: 113 CYNCNKTGHIARNCPEGGRDNSNQTCYNCNKSGHISRNCPDGTK 244
C+NC GH + CPE R C+NC + GH S CP+ K
Sbjct: 455 CFNCKGEGHRSAECPEPPRG-----CFNCGEQGHRSNECPNPAK 493
Score = 32.7 bits (71), Expect = 0.054
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = +2
Query: 5 EGHFARDCKEEADRCYRCNGTGHIARECAQSPDEP 109
EGH + +C E C+ C GH + EC +P +P
Sbjct: 461 EGHRSAECPEPPRGCFNCGEQGHRSNEC-PNPAKP 494
Score = 31.1 bits (67), Expect = 0.16
Identities = 34/125 (27%), Positives = 47/125 (37%), Gaps = 27/125 (21%)
Frame = +2
Query: 8 GHFARDC----KEEADR-CYRCNGTGHIARECAQS--PDE--------PSCY---NCNKT 133
GH + DC KE R CY C GH +R+C + P E S + N T
Sbjct: 266 GHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEERKPREGRNGFTGGSSGFGGGNGGGT 325
Query: 134 GHIARNCPEGGRDNSNQTCYNCNKSGHISRNCPDG---------TKTCYVCGKPGHISRD 286
G + G N+ ++ + G S G C+ C +PGH S D
Sbjct: 326 GFDSGLTNGFGSGNNGESGFGSGGFGGNSNGFGSGGGGQDRGERNNNCFNCQQPGHRSND 385
Query: 287 CDEER 301
C E +
Sbjct: 386 CPEPK 390
Score = 28.3 bits (60), Expect = 1.2
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = +2
Query: 206 SGHISRNCPDGTKTCYVCGKPGHISRDCDEER 301
SG ++ + C+ C +PGH S DC E +
Sbjct: 245 SGGGGQDRGERNNNCFNCQQPGHRSNDCPEPK 276
>AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line
helicase protein 2 protein.
Length = 974
Score = 60.5 bits (140), Expect = 2e-10
Identities = 36/109 (33%), Positives = 49/109 (44%), Gaps = 15/109 (13%)
Frame = +2
Query: 8 GHFARDC----KEEADR-CYRCNGTGHIARECAQS--PDE-----PSCYNCNKTGHIARN 151
GH + DC KE R CY C GH +R+C + P E S + G
Sbjct: 380 GHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEERKPREGRNGFTSGFGGGNDGGFGGG 439
Query: 152 CPEGGRDNSNQ---TCYNCNKSGHISRNCPDGTKTCYVCGKPGHISRDC 289
EG +N + C+NC GH S CP+ + C+ CG+ GH S +C
Sbjct: 440 NAEGFGNNEERGPMKCFNCKGEGHRSAECPEPPRGCFNCGEQGHRSNEC 488
Score = 57.6 bits (133), Expect = 2e-09
Identities = 26/54 (48%), Positives = 32/54 (59%), Gaps = 7/54 (12%)
Frame = +2
Query: 161 GGRDNS--NQTCYNCNKSGHISRNCPDGTK-----TCYVCGKPGHISRDCDEER 301
GG+D N C+NC + GH S +CP+ K CY C +PGH SRDC EER
Sbjct: 248 GGQDRGERNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEER 301
Score = 57.6 bits (133), Expect = 2e-09
Identities = 19/45 (42%), Positives = 30/45 (66%)
Frame = +2
Query: 110 SCYNCNKTGHIARNCPEGGRDNSNQTCYNCNKSGHISRNCPDGTK 244
+C+NC + GH + +CPE ++ + CYNC + GH SR+CP+ K
Sbjct: 258 NCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEERK 302
Score = 57.6 bits (133), Expect = 2e-09
Identities = 26/54 (48%), Positives = 32/54 (59%), Gaps = 7/54 (12%)
Frame = +2
Query: 161 GGRDNS--NQTCYNCNKSGHISRNCPDGTK-----TCYVCGKPGHISRDCDEER 301
GG+D N C+NC + GH S +CP+ K CY C +PGH SRDC EER
Sbjct: 362 GGQDRGERNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEER 415
Score = 57.6 bits (133), Expect = 2e-09
Identities = 19/45 (42%), Positives = 30/45 (66%)
Frame = +2
Query: 110 SCYNCNKTGHIARNCPEGGRDNSNQTCYNCNKSGHISRNCPDGTK 244
+C+NC + GH + +CPE ++ + CYNC + GH SR+CP+ K
Sbjct: 372 NCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEERK 416
Score = 50.4 bits (115), Expect = 3e-07
Identities = 30/111 (27%), Positives = 43/111 (38%), Gaps = 15/111 (13%)
Frame = +2
Query: 8 GHFARDCKEEADRCYRCNGTGHIARECAQSPDEPS---CYNCNKTGHIARNCPE------ 160
G +D E + C+ C GH + +C + E CYNC + GH +R+CPE
Sbjct: 360 GGGGQDRGERNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEERKPRE 419
Query: 161 ------GGRDNSNQTCYNCNKSGHISRNCPDGTKTCYVCGKPGHISRDCDE 295
G N + + N G C+ C GH S +C E
Sbjct: 420 GRNGFTSGFGGGNDGGFGGGNAEGFGNNEERGPMKCFNCKGEGHRSAECPE 470
Score = 48.0 bits (109), Expect = 1e-06
Identities = 21/71 (29%), Positives = 33/71 (46%), Gaps = 3/71 (4%)
Frame = +2
Query: 8 GHFARDCKEEADRCYRCNGTGHIARECAQSPDEPS---CYNCNKTGHIARNCPEGGRDNS 178
G +D E + C+ C GH + +C + E CYNC + GH +R+CPE +
Sbjct: 246 GGGGQDRGERNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEERKPRE 305
Query: 179 NQTCYNCNKSG 211
+ + SG
Sbjct: 306 GRNGFTGGSSG 316
Score = 44.4 bits (100), Expect = 2e-05
Identities = 18/44 (40%), Positives = 23/44 (52%)
Frame = +2
Query: 113 CYNCNKTGHIARNCPEGGRDNSNQTCYNCNKSGHISRNCPDGTK 244
C+NC GH + CPE R C+NC + GH S CP+ K
Sbjct: 455 CFNCKGEGHRSAECPEPPRG-----CFNCGEQGHRSNECPNPAK 493
Score = 32.7 bits (71), Expect = 0.054
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = +2
Query: 5 EGHFARDCKEEADRCYRCNGTGHIARECAQSPDEP 109
EGH + +C E C+ C GH + EC +P +P
Sbjct: 461 EGHRSAECPEPPRGCFNCGEQGHRSNEC-PNPAKP 494
Score = 31.1 bits (67), Expect = 0.16
Identities = 34/125 (27%), Positives = 47/125 (37%), Gaps = 27/125 (21%)
Frame = +2
Query: 8 GHFARDC----KEEADR-CYRCNGTGHIARECAQS--PDE--------PSCY---NCNKT 133
GH + DC KE R CY C GH +R+C + P E S + N T
Sbjct: 266 GHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEERKPREGRNGFTGGSSGFGGGNGGGT 325
Query: 134 GHIARNCPEGGRDNSNQTCYNCNKSGHISRNCPDG---------TKTCYVCGKPGHISRD 286
G + G N+ ++ + G S G C+ C +PGH S D
Sbjct: 326 GFDSGLTNGFGSGNNGESGFGSGGFGGNSNGFGSGGGGQDRGERNNNCFNCQQPGHRSND 385
Query: 287 CDEER 301
C E +
Sbjct: 386 CPEPK 390
Score = 28.3 bits (60), Expect = 1.2
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = +2
Query: 206 SGHISRNCPDGTKTCYVCGKPGHISRDCDEER 301
SG ++ + C+ C +PGH S DC E +
Sbjct: 245 SGGGGQDRGERNNNCFNCQQPGHRSNDCPEPK 276
>U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 59.3 bits (137), Expect = 5e-10
Identities = 35/111 (31%), Positives = 45/111 (40%), Gaps = 17/111 (15%)
Frame = +2
Query: 8 GHFARDC----KEEADR-CYRCNGTGHIARECAQS--PDEPSCYNCNKTGHIARNCPE-- 160
GH + DC KE R CY C GH +REC + P E N
Sbjct: 167 GHRSSDCPEPRKEREPRVCYNCQQPGHTSRECTEERKPREGRTGGFGGGAGFGNNGGNDG 226
Query: 161 --------GGRDNSNQTCYNCNKSGHISRNCPDGTKTCYVCGKPGHISRDC 289
GG + C+NC GH S CP+ + C+ CG+ GH S +C
Sbjct: 227 FGGDGGFGGGEERGPMKCFNCKGEGHRSAECPEPPRGCFNCGEQGHRSNEC 277
Score = 55.6 bits (128), Expect = 7e-09
Identities = 25/52 (48%), Positives = 32/52 (61%), Gaps = 5/52 (9%)
Frame = +2
Query: 161 GGRDNSNQTCYNCNKSGHISRNCPDGTK-----TCYVCGKPGHISRDCDEER 301
GG N+N C+NC + GH S +CP+ K CY C +PGH SR+C EER
Sbjct: 153 GGERNNN--CFNCQQPGHRSSDCPEPRKEREPRVCYNCQQPGHTSRECTEER 202
Score = 54.4 bits (125), Expect = 2e-08
Identities = 18/45 (40%), Positives = 28/45 (62%)
Frame = +2
Query: 110 SCYNCNKTGHIARNCPEGGRDNSNQTCYNCNKSGHISRNCPDGTK 244
+C+NC + GH + +CPE ++ + CYNC + GH SR C + K
Sbjct: 159 NCFNCQQPGHRSSDCPEPRKEREPRVCYNCQQPGHTSRECTEERK 203
Score = 44.4 bits (100), Expect = 2e-05
Identities = 15/38 (39%), Positives = 22/38 (57%)
Frame = +2
Query: 44 RCYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNCP 157
+C+ C G GH + EC + P C+NC + GH + CP
Sbjct: 243 KCFNCKGEGHRSAECPEPP--RGCFNCGEQGHRSNECP 278
Score = 44.4 bits (100), Expect = 2e-05
Identities = 18/44 (40%), Positives = 23/44 (52%)
Frame = +2
Query: 113 CYNCNKTGHIARNCPEGGRDNSNQTCYNCNKSGHISRNCPDGTK 244
C+NC GH + CPE R C+NC + GH S CP+ K
Sbjct: 244 CFNCKGEGHRSAECPEPPRG-----CFNCGEQGHRSNECPNPAK 282
Score = 42.3 bits (95), Expect = 7e-05
Identities = 17/55 (30%), Positives = 26/55 (47%), Gaps = 3/55 (5%)
Frame = +2
Query: 32 EEADRCYRCNGTGHIARECAQSPDEPS---CYNCNKTGHIARNCPEGGRDNSNQT 187
E + C+ C GH + +C + E CYNC + GH +R C E + +T
Sbjct: 155 ERNNNCFNCQQPGHRSSDCPEPRKEREPRVCYNCQQPGHTSRECTEERKPREGRT 209
Score = 32.7 bits (71), Expect = 0.054
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = +2
Query: 5 EGHFARDCKEEADRCYRCNGTGHIARECAQSPDEP 109
EGH + +C E C+ C GH + EC +P +P
Sbjct: 250 EGHRSAECPEPPRGCFNCGEQGHRSNEC-PNPAKP 283
>L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 59.3 bits (137), Expect = 5e-10
Identities = 35/111 (31%), Positives = 45/111 (40%), Gaps = 17/111 (15%)
Frame = +2
Query: 8 GHFARDC----KEEADR-CYRCNGTGHIARECAQS--PDEPSCYNCNKTGHIARNCPE-- 160
GH + DC KE R CY C GH +REC + P E N
Sbjct: 167 GHRSSDCPEPRKEREPRVCYNCQQPGHTSRECTEERKPREGRTGGFGGGAGFGNNGGNDG 226
Query: 161 --------GGRDNSNQTCYNCNKSGHISRNCPDGTKTCYVCGKPGHISRDC 289
GG + C+NC GH S CP+ + C+ CG+ GH S +C
Sbjct: 227 FGGDGGFGGGEERGPMKCFNCKGEGHRSAECPEPPRGCFNCGEQGHRSNEC 277
Score = 55.6 bits (128), Expect = 7e-09
Identities = 25/52 (48%), Positives = 32/52 (61%), Gaps = 5/52 (9%)
Frame = +2
Query: 161 GGRDNSNQTCYNCNKSGHISRNCPDGTK-----TCYVCGKPGHISRDCDEER 301
GG N+N C+NC + GH S +CP+ K CY C +PGH SR+C EER
Sbjct: 153 GGERNNN--CFNCQQPGHRSSDCPEPRKEREPRVCYNCQQPGHTSRECTEER 202
Score = 54.4 bits (125), Expect = 2e-08
Identities = 18/45 (40%), Positives = 28/45 (62%)
Frame = +2
Query: 110 SCYNCNKTGHIARNCPEGGRDNSNQTCYNCNKSGHISRNCPDGTK 244
+C+NC + GH + +CPE ++ + CYNC + GH SR C + K
Sbjct: 159 NCFNCQQPGHRSSDCPEPRKEREPRVCYNCQQPGHTSRECTEERK 203
Score = 44.4 bits (100), Expect = 2e-05
Identities = 15/38 (39%), Positives = 22/38 (57%)
Frame = +2
Query: 44 RCYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNCP 157
+C+ C G GH + EC + P C+NC + GH + CP
Sbjct: 243 KCFNCKGEGHRSAECPEPP--RGCFNCGEQGHRSNECP 278
Score = 44.4 bits (100), Expect = 2e-05
Identities = 18/44 (40%), Positives = 23/44 (52%)
Frame = +2
Query: 113 CYNCNKTGHIARNCPEGGRDNSNQTCYNCNKSGHISRNCPDGTK 244
C+NC GH + CPE R C+NC + GH S CP+ K
Sbjct: 244 CFNCKGEGHRSAECPEPPRG-----CFNCGEQGHRSNECPNPAK 282
Score = 42.3 bits (95), Expect = 7e-05
Identities = 17/55 (30%), Positives = 26/55 (47%), Gaps = 3/55 (5%)
Frame = +2
Query: 32 EEADRCYRCNGTGHIARECAQSPDEPS---CYNCNKTGHIARNCPEGGRDNSNQT 187
E + C+ C GH + +C + E CYNC + GH +R C E + +T
Sbjct: 155 ERNNNCFNCQQPGHRSSDCPEPRKEREPRVCYNCQQPGHTSRECTEERKPREGRT 209
Score = 32.7 bits (71), Expect = 0.054
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = +2
Query: 5 EGHFARDCKEEADRCYRCNGTGHIARECAQSPDEP 109
EGH + +C E C+ C GH + EC +P +P
Sbjct: 250 EGHRSAECPEPPRGCFNCGEQGHRSNEC-PNPAKP 283
>AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line
helicase protein 1 protein.
Length = 763
Score = 59.3 bits (137), Expect = 5e-10
Identities = 35/111 (31%), Positives = 45/111 (40%), Gaps = 17/111 (15%)
Frame = +2
Query: 8 GHFARDC----KEEADR-CYRCNGTGHIARECAQS--PDEPSCYNCNKTGHIARNCPE-- 160
GH + DC KE R CY C GH +REC + P E N
Sbjct: 167 GHRSSDCPEPRKEREPRVCYNCQQPGHTSRECTEERKPREGRTGGFGGGAGFGNNGGNDG 226
Query: 161 --------GGRDNSNQTCYNCNKSGHISRNCPDGTKTCYVCGKPGHISRDC 289
GG + C+NC GH S CP+ + C+ CG+ GH S +C
Sbjct: 227 FGGDGGFGGGEERGPMKCFNCKGEGHRSAECPEPPRGCFNCGEQGHRSNEC 277
Score = 55.6 bits (128), Expect = 7e-09
Identities = 25/52 (48%), Positives = 32/52 (61%), Gaps = 5/52 (9%)
Frame = +2
Query: 161 GGRDNSNQTCYNCNKSGHISRNCPDGTK-----TCYVCGKPGHISRDCDEER 301
GG N+N C+NC + GH S +CP+ K CY C +PGH SR+C EER
Sbjct: 153 GGERNNN--CFNCQQPGHRSSDCPEPRKEREPRVCYNCQQPGHTSRECTEER 202
Score = 54.4 bits (125), Expect = 2e-08
Identities = 18/45 (40%), Positives = 28/45 (62%)
Frame = +2
Query: 110 SCYNCNKTGHIARNCPEGGRDNSNQTCYNCNKSGHISRNCPDGTK 244
+C+NC + GH + +CPE ++ + CYNC + GH SR C + K
Sbjct: 159 NCFNCQQPGHRSSDCPEPRKEREPRVCYNCQQPGHTSRECTEERK 203
Score = 44.4 bits (100), Expect = 2e-05
Identities = 15/38 (39%), Positives = 22/38 (57%)
Frame = +2
Query: 44 RCYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNCP 157
+C+ C G GH + EC + P C+NC + GH + CP
Sbjct: 243 KCFNCKGEGHRSAECPEPP--RGCFNCGEQGHRSNECP 278
Score = 44.4 bits (100), Expect = 2e-05
Identities = 18/44 (40%), Positives = 23/44 (52%)
Frame = +2
Query: 113 CYNCNKTGHIARNCPEGGRDNSNQTCYNCNKSGHISRNCPDGTK 244
C+NC GH + CPE R C+NC + GH S CP+ K
Sbjct: 244 CFNCKGEGHRSAECPEPPRG-----CFNCGEQGHRSNECPNPAK 282
Score = 42.3 bits (95), Expect = 7e-05
Identities = 17/55 (30%), Positives = 26/55 (47%), Gaps = 3/55 (5%)
Frame = +2
Query: 32 EEADRCYRCNGTGHIARECAQSPDEPS---CYNCNKTGHIARNCPEGGRDNSNQT 187
E + C+ C GH + +C + E CYNC + GH +R C E + +T
Sbjct: 155 ERNNNCFNCQQPGHRSSDCPEPRKEREPRVCYNCQQPGHTSRECTEERKPREGRT 209
Score = 32.7 bits (71), Expect = 0.054
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = +2
Query: 5 EGHFARDCKEEADRCYRCNGTGHIARECAQSPDEP 109
EGH + +C E C+ C GH + EC +P +P
Sbjct: 250 EGHRSAECPEPPRGCFNCGEQGHRSNEC-PNPAKP 283
>U15406-1|AAA50456.1| 2272|Caenorhabditis elegans gag, pol and env
protein precursor protein.
Length = 2272
Score = 43.6 bits (98), Expect = 3e-05
Identities = 20/70 (28%), Positives = 38/70 (54%), Gaps = 1/70 (1%)
Frame = +2
Query: 92 QSPDEPSCYNCNKTGHIARNCPEGGRDNSNQTCYNCNKSG-HISRNCPDGTKTCYVCGKP 268
Q+P + C +C + G C + +DN++Q C C +SG H++ + C+ C +
Sbjct: 625 QNPSD-RCSDCQQRGWHMFWCSKKSKDNASQKCDECQQSGWHMASCFKLKNRACFRCNEM 683
Query: 269 GHISRDCDEE 298
GHI+ +C ++
Sbjct: 684 GHIAWNCPKK 693
Score = 40.7 bits (91), Expect = 2e-04
Identities = 23/68 (33%), Positives = 34/68 (50%), Gaps = 3/68 (4%)
Frame = +2
Query: 38 ADRCYRCNGTGHIARECAQ-SPDEPS--CYNCNKTGHIARNCPEGGRDNSNQTCYNCNKS 208
+DRC C G C++ S D S C C ++G +C + N+ C+ CN+
Sbjct: 628 SDRCSDCQQRGWHMFWCSKKSKDNASQKCDECQQSGWHMASCFK----LKNRACFRCNEM 683
Query: 209 GHISRNCP 232
GHI+ NCP
Sbjct: 684 GHIAWNCP 691
Score = 38.3 bits (85), Expect = 0.001
Identities = 15/49 (30%), Positives = 26/49 (53%)
Frame = +2
Query: 38 ADRCYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNCPEGGRDNSNQ 184
+ +C C +G C + + +C+ CN+ GHIA NCP+ + S +
Sbjct: 653 SQKCDECQQSGWHMASCFKLKNR-ACFRCNEMGHIAWNCPKKNENTSEK 700
Score = 29.9 bits (64), Expect = 0.38
Identities = 13/34 (38%), Positives = 17/34 (50%)
Frame = +2
Query: 11 HFARDCKEEADRCYRCNGTGHIARECAQSPDEPS 112
H A K + C+RCN GHIA C + + S
Sbjct: 665 HMASCFKLKNRACFRCNEMGHIAWNCPKKNENTS 698
>L23646-13|AAA28035.2| 2175|Caenorhabditis elegans C. elegans RETR-1
protein, isoforma protein.
Length = 2175
Score = 43.6 bits (98), Expect = 3e-05
Identities = 20/70 (28%), Positives = 38/70 (54%), Gaps = 1/70 (1%)
Frame = +2
Query: 92 QSPDEPSCYNCNKTGHIARNCPEGGRDNSNQTCYNCNKSG-HISRNCPDGTKTCYVCGKP 268
Q+P + C +C + G C + +DN++Q C C +SG H++ + C+ C +
Sbjct: 528 QNPSD-RCSDCQQRGWHMFWCSKKSKDNASQKCDECQQSGWHMASCFKLKNRACFRCNEM 586
Query: 269 GHISRDCDEE 298
GHI+ +C ++
Sbjct: 587 GHIAWNCPKK 596
Score = 40.7 bits (91), Expect = 2e-04
Identities = 23/68 (33%), Positives = 34/68 (50%), Gaps = 3/68 (4%)
Frame = +2
Query: 38 ADRCYRCNGTGHIARECAQ-SPDEPS--CYNCNKTGHIARNCPEGGRDNSNQTCYNCNKS 208
+DRC C G C++ S D S C C ++G +C + N+ C+ CN+
Sbjct: 531 SDRCSDCQQRGWHMFWCSKKSKDNASQKCDECQQSGWHMASCFK----LKNRACFRCNEM 586
Query: 209 GHISRNCP 232
GHI+ NCP
Sbjct: 587 GHIAWNCP 594
Score = 38.3 bits (85), Expect = 0.001
Identities = 15/49 (30%), Positives = 26/49 (53%)
Frame = +2
Query: 38 ADRCYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNCPEGGRDNSNQ 184
+ +C C +G C + + +C+ CN+ GHIA NCP+ + S +
Sbjct: 556 SQKCDECQQSGWHMASCFKLKNR-ACFRCNEMGHIAWNCPKKNENTSEK 603
Score = 29.9 bits (64), Expect = 0.38
Identities = 13/34 (38%), Positives = 17/34 (50%)
Frame = +2
Query: 11 HFARDCKEEADRCYRCNGTGHIARECAQSPDEPS 112
H A K + C+RCN GHIA C + + S
Sbjct: 568 HMASCFKLKNRACFRCNEMGHIAWNCPKKNENTS 601
>L23646-12|AAL02516.1| 2186|Caenorhabditis elegans C. elegans RETR-1
protein, isoformb protein.
Length = 2186
Score = 43.6 bits (98), Expect = 3e-05
Identities = 20/70 (28%), Positives = 38/70 (54%), Gaps = 1/70 (1%)
Frame = +2
Query: 92 QSPDEPSCYNCNKTGHIARNCPEGGRDNSNQTCYNCNKSG-HISRNCPDGTKTCYVCGKP 268
Q+P + C +C + G C + +DN++Q C C +SG H++ + C+ C +
Sbjct: 539 QNPSD-RCSDCQQRGWHMFWCSKKSKDNASQKCDECQQSGWHMASCFKLKNRACFRCNEM 597
Query: 269 GHISRDCDEE 298
GHI+ +C ++
Sbjct: 598 GHIAWNCPKK 607
Score = 40.7 bits (91), Expect = 2e-04
Identities = 23/68 (33%), Positives = 34/68 (50%), Gaps = 3/68 (4%)
Frame = +2
Query: 38 ADRCYRCNGTGHIARECAQ-SPDEPS--CYNCNKTGHIARNCPEGGRDNSNQTCYNCNKS 208
+DRC C G C++ S D S C C ++G +C + N+ C+ CN+
Sbjct: 542 SDRCSDCQQRGWHMFWCSKKSKDNASQKCDECQQSGWHMASCFK----LKNRACFRCNEM 597
Query: 209 GHISRNCP 232
GHI+ NCP
Sbjct: 598 GHIAWNCP 605
Score = 38.3 bits (85), Expect = 0.001
Identities = 15/49 (30%), Positives = 26/49 (53%)
Frame = +2
Query: 38 ADRCYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNCPEGGRDNSNQ 184
+ +C C +G C + + +C+ CN+ GHIA NCP+ + S +
Sbjct: 567 SQKCDECQQSGWHMASCFKLKNR-ACFRCNEMGHIAWNCPKKNENTSEK 614
Score = 29.9 bits (64), Expect = 0.38
Identities = 13/34 (38%), Positives = 17/34 (50%)
Frame = +2
Query: 11 HFARDCKEEADRCYRCNGTGHIARECAQSPDEPS 112
H A K + C+RCN GHIA C + + S
Sbjct: 579 HMASCFKLKNRACFRCNEMGHIAWNCPKKNENTS 612
>Z68297-6|CAE45045.1| 302|Caenorhabditis elegans Hypothetical
protein F11A10.8 protein.
Length = 302
Score = 41.5 bits (93), Expect = 1e-04
Identities = 20/61 (32%), Positives = 29/61 (47%), Gaps = 1/61 (1%)
Frame = +2
Query: 110 SCYNCNKTGHIARNCPE-GGRDNSNQTCYNCNKSGHISRNCPDGTKTCYVCGKPGHISRD 286
+C+NC++ GH A CP G+ NQ ++ I TCY CG+ GH +
Sbjct: 205 TCHNCHERGHKATTCPHLPGQTRQNQDHHHRVDLSLIPDKKNLSDVTCYKCGEKGHYANR 264
Query: 287 C 289
C
Sbjct: 265 C 265
Score = 38.7 bits (86), Expect = 8e-04
Identities = 19/74 (25%), Positives = 32/74 (43%)
Frame = +2
Query: 17 ARDCKEEADRCYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNCPEGGRDNSNQTCYN 196
A+ +A C+ C+ GH A C P + N + + + ++ S+ TCY
Sbjct: 196 AKPTYSQAITCHNCHERGHKATTCPHLPGQTR-QNQDHHHRVDLSLIPDKKNLSDVTCYK 254
Query: 197 CNKSGHISRNCPDG 238
C + GH + C G
Sbjct: 255 CGEKGHYANRCHKG 268
>AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA
helicase-3 protein.
Length = 720
Score = 41.5 bits (93), Expect = 1e-04
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = +2
Query: 179 NQTCYNCNKSGHISRNCPDGTKTCYVCGKPGHISRDC 289
+ TC+NC K GH + C + C CG P H + +C
Sbjct: 201 SNTCFNCKKYGHRATECSAPQRECANCGDPNHRANEC 237
Score = 33.9 bits (74), Expect = 0.023
Identities = 15/45 (33%), Positives = 20/45 (44%)
Frame = +2
Query: 110 SCYNCNKTGHIARNCPEGGRDNSNQTCYNCNKSGHISRNCPDGTK 244
+C+NC K GH A C R+ C NC H + C +K
Sbjct: 203 TCFNCKKYGHRATECSAPQRE-----CANCGDPNHRANECASWSK 242
Score = 33.5 bits (73), Expect = 0.031
Identities = 14/39 (35%), Positives = 18/39 (46%)
Frame = +2
Query: 38 ADRCYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNC 154
++ C+ C GH A EC S + C NC H A C
Sbjct: 201 SNTCFNCKKYGHRATEC--SAPQRECANCGDPNHRANEC 237
Score = 28.7 bits (61), Expect = 0.87
Identities = 11/28 (39%), Positives = 12/28 (42%)
Frame = +2
Query: 8 GHFARDCKEEADRCYRCNGTGHIARECA 91
GH A +C C C H A ECA
Sbjct: 211 GHRATECSAPQRECANCGDPNHRANECA 238
>AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line
helicase protein 3 protein.
Length = 720
Score = 41.5 bits (93), Expect = 1e-04
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = +2
Query: 179 NQTCYNCNKSGHISRNCPDGTKTCYVCGKPGHISRDC 289
+ TC+NC K GH + C + C CG P H + +C
Sbjct: 201 SNTCFNCKKYGHRATECSAPQRECANCGDPNHRANEC 237
Score = 33.9 bits (74), Expect = 0.023
Identities = 15/45 (33%), Positives = 20/45 (44%)
Frame = +2
Query: 110 SCYNCNKTGHIARNCPEGGRDNSNQTCYNCNKSGHISRNCPDGTK 244
+C+NC K GH A C R+ C NC H + C +K
Sbjct: 203 TCFNCKKYGHRATECSAPQRE-----CANCGDPNHRANECASWSK 242
Score = 33.5 bits (73), Expect = 0.031
Identities = 14/39 (35%), Positives = 18/39 (46%)
Frame = +2
Query: 38 ADRCYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNC 154
++ C+ C GH A EC S + C NC H A C
Sbjct: 201 SNTCFNCKKYGHRATEC--SAPQRECANCGDPNHRANEC 237
Score = 28.7 bits (61), Expect = 0.87
Identities = 11/28 (39%), Positives = 12/28 (42%)
Frame = +2
Query: 8 GHFARDCKEEADRCYRCNGTGHIARECA 91
GH A +C C C H A ECA
Sbjct: 211 GHRATECSAPQRECANCGDPNHRANECA 238
>Z81494-3|CAB61009.1| 196|Caenorhabditis elegans Hypothetical
protein F02E9.2b protein.
Length = 196
Score = 39.9 bits (89), Expect = 4e-04
Identities = 18/53 (33%), Positives = 27/53 (50%), Gaps = 4/53 (7%)
Frame = +2
Query: 155 PEGGRDNSNQTCYNCNK-SGHISRNCPD---GTKTCYVCGKPGHISRDCDEER 301
P G + + C+ C K + H +++CP+ K CY CG H+S C E R
Sbjct: 102 PLGRKKAVSLRCFRCGKFATHKAKSCPNVKTDAKVCYTCGSEEHVSSICPERR 154
Score = 35.1 bits (77), Expect = 0.010
Identities = 16/44 (36%), Positives = 20/44 (45%), Gaps = 2/44 (4%)
Frame = +2
Query: 44 RCYRCNGTG-HIARECAQ-SPDEPSCYNCNKTGHIARNCPEGGR 169
RC+RC H A+ C D CY C H++ CPE R
Sbjct: 112 RCFRCGKFATHKAKSCPNVKTDAKVCYTCGSEEHVSSICPERRR 155
>Z81494-2|CAB61008.1| 227|Caenorhabditis elegans Hypothetical
protein F02E9.2a protein.
Length = 227
Score = 39.9 bits (89), Expect = 4e-04
Identities = 18/53 (33%), Positives = 27/53 (50%), Gaps = 4/53 (7%)
Frame = +2
Query: 155 PEGGRDNSNQTCYNCNK-SGHISRNCPD---GTKTCYVCGKPGHISRDCDEER 301
P G + + C+ C K + H +++CP+ K CY CG H+S C E R
Sbjct: 133 PLGRKKAVSLRCFRCGKFATHKAKSCPNVKTDAKVCYTCGSEEHVSSICPERR 185
Score = 35.1 bits (77), Expect = 0.010
Identities = 16/44 (36%), Positives = 20/44 (45%), Gaps = 2/44 (4%)
Frame = +2
Query: 44 RCYRCNGTG-HIARECAQ-SPDEPSCYNCNKTGHIARNCPEGGR 169
RC+RC H A+ C D CY C H++ CPE R
Sbjct: 143 RCFRCGKFATHKAKSCPNVKTDAKVCYTCGSEEHVSSICPERRR 186
>U75915-1|AAB49759.1| 227|Caenorhabditis elegans Lin-28 protein.
Length = 227
Score = 39.9 bits (89), Expect = 4e-04
Identities = 18/53 (33%), Positives = 27/53 (50%), Gaps = 4/53 (7%)
Frame = +2
Query: 155 PEGGRDNSNQTCYNCNK-SGHISRNCPD---GTKTCYVCGKPGHISRDCDEER 301
P G + + C+ C K + H +++CP+ K CY CG H+S C E R
Sbjct: 133 PLGRKKAVSLRCFRCGKFATHKAKSCPNVKTDAKVCYTCGSEEHVSSICPERR 185
Score = 35.1 bits (77), Expect = 0.010
Identities = 16/44 (36%), Positives = 20/44 (45%), Gaps = 2/44 (4%)
Frame = +2
Query: 44 RCYRCNGTG-HIARECAQ-SPDEPSCYNCNKTGHIARNCPEGGR 169
RC+RC H A+ C D CY C H++ CPE R
Sbjct: 143 RCFRCGKFATHKAKSCPNVKTDAKVCYTCGSEEHVSSICPERRR 186
>U75912-1|AAC47476.1| 227|Caenorhabditis elegans LIN-28 protein.
Length = 227
Score = 39.9 bits (89), Expect = 4e-04
Identities = 18/53 (33%), Positives = 27/53 (50%), Gaps = 4/53 (7%)
Frame = +2
Query: 155 PEGGRDNSNQTCYNCNK-SGHISRNCPD---GTKTCYVCGKPGHISRDCDEER 301
P G + + C+ C K + H +++CP+ K CY CG H+S C E R
Sbjct: 133 PLGRKKAVSLRCFRCGKFATHKAKSCPNVKTDAKVCYTCGSEEHVSSICPERR 185
Score = 35.1 bits (77), Expect = 0.010
Identities = 16/44 (36%), Positives = 20/44 (45%), Gaps = 2/44 (4%)
Frame = +2
Query: 44 RCYRCNGTG-HIARECAQ-SPDEPSCYNCNKTGHIARNCPEGGR 169
RC+RC H A+ C D CY C H++ CPE R
Sbjct: 143 RCFRCGKFATHKAKSCPNVKTDAKVCYTCGSEEHVSSICPERRR 186
>AC006672-5|AAM98003.1| 42|Caenorhabditis elegans Hypothetical
protein K08D12.3b protein.
Length = 42
Score = 39.1 bits (87), Expect = 6e-04
Identities = 13/21 (61%), Positives = 17/21 (80%)
Frame = +2
Query: 176 SNQTCYNCNKSGHISRNCPDG 238
S++ CY C + GHISRNCP+G
Sbjct: 2 SDRNCYKCQQPGHISRNCPNG 22
Score = 37.1 bits (82), Expect = 0.002
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = +2
Query: 110 SCYNCNKTGHIARNCPEGGRDNSNQ 184
+CY C + GHI+RNCP G D +
Sbjct: 5 NCYKCQQPGHISRNCPNGESDGGRR 29
Score = 31.5 bits (68), Expect = 0.12
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = +2
Query: 242 KTCYVCGKPGHISRDC 289
+ CY C +PGHISR+C
Sbjct: 4 RNCYKCQQPGHISRNC 19
Score = 27.5 bits (58), Expect = 2.0
Identities = 10/18 (55%), Positives = 13/18 (72%), Gaps = 1/18 (5%)
Frame = +2
Query: 38 ADR-CYRCNGTGHIAREC 88
+DR CY+C GHI+R C
Sbjct: 2 SDRNCYKCQQPGHISRNC 19
>AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical
protein Y116A8C.32 protein.
Length = 699
Score = 38.3 bits (85), Expect = 0.001
Identities = 14/39 (35%), Positives = 19/39 (48%)
Frame = +2
Query: 113 CYNCNKTGHIARNCPEGGRDNSNQTCYNCNKSGHISRNC 229
C NC H + CP+ + C NC GHIS++C
Sbjct: 430 CSNCGSDEHKSWECPDAPNVTNQIKCTNCGAFGHISKDC 468
Score = 36.7 bits (81), Expect = 0.003
Identities = 17/39 (43%), Positives = 18/39 (46%), Gaps = 5/39 (12%)
Frame = +2
Query: 188 CYNCNKSGHISRNCPDGTKT-----CYVCGKPGHISRDC 289
C NC H S CPD C CG GHIS+DC
Sbjct: 430 CSNCGSDEHKSWECPDAPNVTNQIKCTNCGAFGHISKDC 468
Score = 35.9 bits (79), Expect = 0.006
Identities = 18/57 (31%), Positives = 27/57 (47%), Gaps = 5/57 (8%)
Frame = +2
Query: 8 GHFARDCKEEADRCYRCNGTGHIARECAQSP---DEPSCYNCNKTGHIARNC--PEG 163
G F + RC C H + EC +P ++ C NC GHI+++C P+G
Sbjct: 417 GTFRPEDLANGARCSNCGSDEHKSWECPDAPNVTNQIKCTNCGAFGHISKDCKNPKG 473
>AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein
protein.
Length = 699
Score = 38.3 bits (85), Expect = 0.001
Identities = 14/39 (35%), Positives = 19/39 (48%)
Frame = +2
Query: 113 CYNCNKTGHIARNCPEGGRDNSNQTCYNCNKSGHISRNC 229
C NC H + CP+ + C NC GHIS++C
Sbjct: 430 CSNCGSDEHKSWECPDAPNVTNQIKCTNCGAFGHISKDC 468
Score = 36.7 bits (81), Expect = 0.003
Identities = 17/39 (43%), Positives = 18/39 (46%), Gaps = 5/39 (12%)
Frame = +2
Query: 188 CYNCNKSGHISRNCPDGTKT-----CYVCGKPGHISRDC 289
C NC H S CPD C CG GHIS+DC
Sbjct: 430 CSNCGSDEHKSWECPDAPNVTNQIKCTNCGAFGHISKDC 468
Score = 35.9 bits (79), Expect = 0.006
Identities = 18/57 (31%), Positives = 27/57 (47%), Gaps = 5/57 (8%)
Frame = +2
Query: 8 GHFARDCKEEADRCYRCNGTGHIARECAQSP---DEPSCYNCNKTGHIARNC--PEG 163
G F + RC C H + EC +P ++ C NC GHI+++C P+G
Sbjct: 417 GTFRPEDLANGARCSNCGSDEHKSWECPDAPNVTNQIKCTNCGAFGHISKDCKNPKG 473
>AF016670-8|AAB66101.1| 783|Caenorhabditis elegans Hypothetical
protein K02F6.1 protein.
Length = 783
Score = 34.7 bits (76), Expect = 0.013
Identities = 17/55 (30%), Positives = 22/55 (40%)
Frame = +2
Query: 47 CYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNCPEGGRDNSNQTCYNCNKSG 211
CY+C GH++++C QS N KT H N E G N G
Sbjct: 313 CYKCKVVGHVSKDCPQSSTNSGVTN-RKTEHSEVNTLEVGSGRQTSPSLRLNVEG 366
Score = 31.5 bits (68), Expect = 0.12
Identities = 8/23 (34%), Positives = 15/23 (65%)
Frame = +2
Query: 107 PSCYNCNKTGHIARNCPEGGRDN 175
P CY C GH++++CP+ ++
Sbjct: 311 PYCYKCKVVGHVSKDCPQSSTNS 333
Score = 29.1 bits (62), Expect = 0.66
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = +2
Query: 188 CYNCNKSGHISRNCPDGT 241
CY C GH+S++CP +
Sbjct: 313 CYKCKVVGHVSKDCPQSS 330
Score = 26.6 bits (56), Expect = 3.5
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = +2
Query: 248 CYVCGKPGHISRDCDE 295
CY C GH+S+DC +
Sbjct: 313 CYKCKVVGHVSKDCPQ 328
>U21322-3|AAA62541.1| 1425|Caenorhabditis elegans Hypothetical protein
K10D2.3 protein.
Length = 1425
Score = 33.9 bits (74), Expect = 0.023
Identities = 18/66 (27%), Positives = 30/66 (45%), Gaps = 11/66 (16%)
Frame = +2
Query: 74 IARECAQ--SPDEPSCYNCNKTGHIARNCPEGG---------RDNSNQTCYNCNKSGHIS 220
+ R+C Q +P + C+ C++ GH +CP+ NS + Y N SG
Sbjct: 1342 LLRKCNQGSAPTDRQCHQCHRIGHFVESCPQRALAKEARKRFGSNSTNSSYRSNDSGRGF 1401
Query: 221 RNCPDG 238
+N +G
Sbjct: 1402 KNGEEG 1407
>Z92828-7|CAE48500.1| 700|Caenorhabditis elegans Hypothetical
protein K03D10.1 protein.
Length = 700
Score = 33.5 bits (73), Expect = 0.031
Identities = 20/76 (26%), Positives = 31/76 (40%), Gaps = 1/76 (1%)
Frame = +2
Query: 26 CKEEADRCYRCNGTGHIARECAQSPDEPSCYN-CNKTGHIARNCPEGGRDNSNQTCYNCN 202
C+E+ D C + C S D +C + C+ I + P SNQ+ Y C+
Sbjct: 66 CREQFDDIKACK------KSCVASDDRETCEDSCHYLQRIYQEKPGACPSVSNQSNYECS 119
Query: 203 KSGHISRNCPDGTKTC 250
+ CP+ K C
Sbjct: 120 ALCQMDGECPETQKCC 135
>Z81561-2|CAB04551.2| 700|Caenorhabditis elegans Hypothetical
protein K03D10.1 protein.
Length = 700
Score = 33.5 bits (73), Expect = 0.031
Identities = 20/76 (26%), Positives = 31/76 (40%), Gaps = 1/76 (1%)
Frame = +2
Query: 26 CKEEADRCYRCNGTGHIARECAQSPDEPSCYN-CNKTGHIARNCPEGGRDNSNQTCYNCN 202
C+E+ D C + C S D +C + C+ I + P SNQ+ Y C+
Sbjct: 66 CREQFDDIKACK------KSCVASDDRETCEDSCHYLQRIYQEKPGACPSVSNQSNYECS 119
Query: 203 KSGHISRNCPDGTKTC 250
+ CP+ K C
Sbjct: 120 ALCQMDGECPETQKCC 135
>L12018-4|AAK68342.1| 456|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 10, isoform a
protein.
Length = 456
Score = 32.7 bits (71), Expect = 0.054
Identities = 19/60 (31%), Positives = 29/60 (48%)
Frame = +2
Query: 47 CYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNCPEGGRDNSNQTCYNCNKSGHISRN 226
C +C+GT + + SC CN TG +++ +GG TC C SGH ++N
Sbjct: 191 CLKCHGT-----QVEPGHKKTSCPYCNGTGAVSQRL-QGGFFYQT-TCNRCRGSGHYNKN 243
>L12018-3|AAK68343.1| 446|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 10, isoform b
protein.
Length = 446
Score = 32.7 bits (71), Expect = 0.054
Identities = 19/60 (31%), Positives = 29/60 (48%)
Frame = +2
Query: 47 CYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNCPEGGRDNSNQTCYNCNKSGHISRN 226
C +C+GT + + SC CN TG +++ +GG TC C SGH ++N
Sbjct: 191 CLKCHGT-----QVEPGHKKTSCPYCNGTGAVSQRL-QGGFFYQT-TCNRCRGSGHYNKN 243
>AF342986-1|AAL73338.1| 700|Caenorhabditis elegans KAL-1 protein.
Length = 700
Score = 31.5 bits (68), Expect = 0.12
Identities = 19/76 (25%), Positives = 30/76 (39%), Gaps = 1/76 (1%)
Frame = +2
Query: 26 CKEEADRCYRCNGTGHIARECAQSPDEPSCYN-CNKTGHIARNCPEGGRDNSNQTCYNCN 202
C+E+ D C + C D +C + C+ I + P SNQ+ Y C+
Sbjct: 66 CREQFDDIKACK------KSCVPRDDRETCEDSCHYLQRIYQEKPGACPSVSNQSNYECS 119
Query: 203 KSGHISRNCPDGTKTC 250
+ CP+ K C
Sbjct: 120 ALCQMDGECPETQKCC 135
>Z54236-5|CAA90980.1| 386|Caenorhabditis elegans Hypothetical
protein C27B7.5 protein.
Length = 386
Score = 30.7 bits (66), Expect = 0.22
Identities = 15/46 (32%), Positives = 20/46 (43%)
Frame = +2
Query: 95 SPDEPSCYNCNKTGHIARNCPEGGRDNSNQTCYNCNKSGHISRNCP 232
SP + +K R GR C++C + GHISR CP
Sbjct: 140 SPRSDGMGSSSKRPRSGRRTGRRGRGGPGH-CFHCQEHGHISRMCP 184
Score = 28.3 bits (60), Expect = 1.2
Identities = 8/16 (50%), Positives = 13/16 (81%)
Frame = +2
Query: 113 CYNCNKTGHIARNCPE 160
C++C + GHI+R CP+
Sbjct: 170 CFHCQEHGHISRMCPK 185
>U20861-8|AAA62297.3| 372|Caenorhabditis elegans Hypothetical
protein C28H8.9a protein.
Length = 372
Score = 30.7 bits (66), Expect = 0.22
Identities = 22/77 (28%), Positives = 33/77 (42%)
Frame = +2
Query: 32 EEADRCYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNCPEGGRDNSNQTCYNCNKSG 211
E + C C+GT + + D SC++C ++GH P N N T +SG
Sbjct: 252 EISTSCDFCSGTAFMNKNTKLPEDLVSCHDCGRSGH-----PSCLNFNQNVTKI-IKRSG 305
Query: 212 HISRNCPDGTKTCYVCG 262
C K+C +CG
Sbjct: 306 WQCLEC----KSCTICG 318
Score = 25.4 bits (53), Expect = 8.1
Identities = 10/34 (29%), Positives = 20/34 (58%), Gaps = 2/34 (5%)
Frame = +2
Query: 185 TCYNCNKSGHISRNC--PDGTKTCYVCGKPGHIS 280
+C C+ + +++N P+ +C+ CG+ GH S
Sbjct: 256 SCDFCSGTAFMNKNTKLPEDLVSCHDCGRSGHPS 289
>AF077533-3|AAC64626.1| 1023|Caenorhabditis elegans Hypothetical
protein F54G2.2 protein.
Length = 1023
Score = 30.7 bits (66), Expect = 0.22
Identities = 15/49 (30%), Positives = 22/49 (44%), Gaps = 4/49 (8%)
Frame = +2
Query: 98 PDEPSCYNCNKTGHIARNC---PEGG-RDNSNQTCYNCNKSGHISRNCP 232
P+ C C + G +C P+ R+ C+ C + GHIS CP
Sbjct: 576 PENGICAECKQVGGHEPSCSLAPKTWKRERPPPQCFTCGEMGHISTYCP 624
Score = 29.9 bits (64), Expect = 0.38
Identities = 13/45 (28%), Positives = 19/45 (42%), Gaps = 7/45 (15%)
Frame = +2
Query: 47 CYRCNGTGHIARECAQSPDE-------PSCYNCNKTGHIARNCPE 160
C C G C+ +P P C+ C + GHI+ CP+
Sbjct: 581 CAECKQVGGHEPSCSLAPKTWKRERPPPQCFTCGEMGHISTYCPK 625
Score = 27.1 bits (57), Expect = 2.7
Identities = 15/46 (32%), Positives = 19/46 (41%), Gaps = 9/46 (19%)
Frame = +2
Query: 179 NQTCYNCNKSGHISRNCPDGTKT---------CYVCGKPGHISRDC 289
N C C + G +C KT C+ CG+ GHIS C
Sbjct: 578 NGICAECKQVGGHEPSCSLAPKTWKRERPPPQCFTCGEMGHISTYC 623
>Z70286-6|CAA94293.1| 3672|Caenorhabditis elegans Hypothetical protein
K08C7.3b protein.
Length = 3672
Score = 30.3 bits (65), Expect = 0.29
Identities = 26/101 (25%), Positives = 39/101 (38%), Gaps = 15/101 (14%)
Frame = +2
Query: 2 HEGHFARDCKEEADRCYRCN----GTGHIARECAQSPDEPSCYNCN-KTGHIARNCPE-- 160
+EGH+ C C T + A+ C S +E CN K G+ C
Sbjct: 1862 NEGHYGNATNGSPYDCMACACPFAPTNNFAKSCDVS-EEGQLLQCNCKPGYTGDRCDRCA 1920
Query: 161 ----GGRDNSNQTCYNCNKSGHI----SRNCPDGTKTCYVC 259
G S ++C C +G+ SR+C + CY+C
Sbjct: 1921 SGFFGHPQISGESCSPCQCNGNNNLTDSRSCHPNSGDCYLC 1961
Score = 27.1 bits (57), Expect = 2.7
Identities = 19/77 (24%), Positives = 31/77 (40%), Gaps = 4/77 (5%)
Frame = +2
Query: 32 EEADRCYRCNGTGHIARECAQSPDEPSCYNC--NKTGHIARNCPEG--GRDNSNQTCYNC 199
E C +CNG ++ + P+ CY C N G +C G + + C +C
Sbjct: 1932 ESCSPC-QCNGNNNLTDSRSCHPNSGDCYLCEQNTDGRHCESCAAWFYGDAVTAKNCSSC 1990
Query: 200 NKSGHISRNCPDGTKTC 250
S S+ C + + C
Sbjct: 1991 ECSQCGSQYCDNKSGGC 2007
>Z70286-5|CAB61016.1| 3704|Caenorhabditis elegans Hypothetical protein
K08C7.3a protein.
Length = 3704
Score = 30.3 bits (65), Expect = 0.29
Identities = 26/101 (25%), Positives = 39/101 (38%), Gaps = 15/101 (14%)
Frame = +2
Query: 2 HEGHFARDCKEEADRCYRCN----GTGHIARECAQSPDEPSCYNCN-KTGHIARNCPE-- 160
+EGH+ C C T + A+ C S +E CN K G+ C
Sbjct: 1862 NEGHYGNATNGSPYDCMACACPFAPTNNFAKSCDVS-EEGQLLQCNCKPGYTGDRCDRCA 1920
Query: 161 ----GGRDNSNQTCYNCNKSGHI----SRNCPDGTKTCYVC 259
G S ++C C +G+ SR+C + CY+C
Sbjct: 1921 SGFFGHPQISGESCSPCQCNGNNNLTDSRSCHPNSGDCYLC 1961
Score = 27.1 bits (57), Expect = 2.7
Identities = 19/77 (24%), Positives = 31/77 (40%), Gaps = 4/77 (5%)
Frame = +2
Query: 32 EEADRCYRCNGTGHIARECAQSPDEPSCYNC--NKTGHIARNCPEG--GRDNSNQTCYNC 199
E C +CNG ++ + P+ CY C N G +C G + + C +C
Sbjct: 1932 ESCSPC-QCNGNNNLTDSRSCHPNSGDCYLCEQNTDGRHCESCAAWFYGDAVTAKNCSSC 1990
Query: 200 NKSGHISRNCPDGTKTC 250
S S+ C + + C
Sbjct: 1991 ECSQCGSQYCDNKSGGC 2007
>AB016806-1|BAA32347.1| 3704|Caenorhabditis elegans laminin alpha
chain protein.
Length = 3704
Score = 30.3 bits (65), Expect = 0.29
Identities = 26/101 (25%), Positives = 39/101 (38%), Gaps = 15/101 (14%)
Frame = +2
Query: 2 HEGHFARDCKEEADRCYRCN----GTGHIARECAQSPDEPSCYNCN-KTGHIARNCPE-- 160
+EGH+ C C T + A+ C S +E CN K G+ C
Sbjct: 1862 NEGHYGNATNGSPYDCMACACPFAPTNNFAKSCDVS-EEGQLLQCNCKPGYTGDRCDRCA 1920
Query: 161 ----GGRDNSNQTCYNCNKSGHI----SRNCPDGTKTCYVC 259
G S ++C C +G+ SR+C + CY+C
Sbjct: 1921 SGFFGHPQISGESCSPCQCNGNNNLTDSRSCHPNSGDCYLC 1961
Score = 27.1 bits (57), Expect = 2.7
Identities = 19/77 (24%), Positives = 31/77 (40%), Gaps = 4/77 (5%)
Frame = +2
Query: 32 EEADRCYRCNGTGHIARECAQSPDEPSCYNC--NKTGHIARNCPEG--GRDNSNQTCYNC 199
E C +CNG ++ + P+ CY C N G +C G + + C +C
Sbjct: 1932 ESCSPC-QCNGNNNLTDSRSCHPNSGDCYLCEQNTDGRHCESCAAWFYGDAVTAKNCSSC 1990
Query: 200 NKSGHISRNCPDGTKTC 250
S S+ C + + C
Sbjct: 1991 ECSQCGSQYCDNKSGGC 2007
>AB001074-1|BAA19229.1| 3704|Caenorhabditis elegans laminin alpha
protein.
Length = 3704
Score = 30.3 bits (65), Expect = 0.29
Identities = 26/101 (25%), Positives = 39/101 (38%), Gaps = 15/101 (14%)
Frame = +2
Query: 2 HEGHFARDCKEEADRCYRCN----GTGHIARECAQSPDEPSCYNCN-KTGHIARNCPE-- 160
+EGH+ C C T + A+ C S +E CN K G+ C
Sbjct: 1862 NEGHYGNATNGSPYDCMACACPFAPTNNFAKSCDVS-EEGQLLQCNCKPGYTGDRCDRCA 1920
Query: 161 ----GGRDNSNQTCYNCNKSGHI----SRNCPDGTKTCYVC 259
G S ++C C +G+ SR+C + CY+C
Sbjct: 1921 SGFFGHPQISGESCSPCQCNGNNNLTDSRSCHPNSGDCYLC 1961
Score = 27.1 bits (57), Expect = 2.7
Identities = 19/77 (24%), Positives = 31/77 (40%), Gaps = 4/77 (5%)
Frame = +2
Query: 32 EEADRCYRCNGTGHIARECAQSPDEPSCYNC--NKTGHIARNCPEG--GRDNSNQTCYNC 199
E C +CNG ++ + P+ CY C N G +C G + + C +C
Sbjct: 1932 ESCSPC-QCNGNNNLTDSRSCHPNSGDCYLCEQNTDGRHCESCAAWFYGDAVTAKNCSSC 1990
Query: 200 NKSGHISRNCPDGTKTC 250
S S+ C + + C
Sbjct: 1991 ECSQCGSQYCDNKSGGC 2007
>U62281-1|AAD09363.1| 925|Caenorhabditis elegans lipoprotein
receptor precursor protein.
Length = 925
Score = 29.9 bits (64), Expect = 0.38
Identities = 24/94 (25%), Positives = 42/94 (44%), Gaps = 6/94 (6%)
Frame = +2
Query: 35 EADRCYRCNGTGHIARECAQSPDEPS-CYNCNKTGHIARNCPEGGRDNSNQTCYNC--NK 205
+AD + C+ G + C + E C N T + + CP G D+ ++ C C +
Sbjct: 253 QADHMHSCSAAGMYS--CGRKGSEIGVCIPMNATCNGIKECPLG--DDESKHCSECARKR 308
Query: 206 SGHISRNCPDGTKTCYVCGKPGHISRD---CDEE 298
H N P G + C +C + ++ D C++E
Sbjct: 309 CDHTCMNTPHGAR-C-ICQEGYKLADDGLTCEDE 340
>Z81071-6|CAB03010.1| 464|Caenorhabditis elegans Hypothetical
protein F28F8.7 protein.
Length = 464
Score = 29.5 bits (63), Expect = 0.50
Identities = 11/24 (45%), Positives = 13/24 (54%)
Frame = +2
Query: 188 CYNCNKSGHISRNCPDGTKTCYVC 259
C NCNK+ PD TK C +C
Sbjct: 302 CQNCNKALKYYDPIPDDTKLCLIC 325
>Z69302-8|CAA93261.3| 420|Caenorhabditis elegans Hypothetical
protein F40F8.5 protein.
Length = 420
Score = 29.5 bits (63), Expect = 0.50
Identities = 25/96 (26%), Positives = 33/96 (34%), Gaps = 2/96 (2%)
Frame = +2
Query: 2 HEGHFARDCK--EEADRCYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNCPEGGRDN 175
HEGH D K E DR H R +P+ N + TGH R D+
Sbjct: 92 HEGHHGNDMKHRENMDRKKHGTHVDHHGRVRRNGDHDPNDPNVDHTGHNHR-VKRSIDDD 150
Query: 176 SNQTCYNCNKSGHISRNCPDGTKTCYVCGKPGHISR 283
+ T + + H + D T GH R
Sbjct: 151 PSDTTIDHTRHNHRRKRNQDDDPTDTTIDHTGHNHR 186
>AL132952-16|CAC70119.1| 107|Caenorhabditis elegans Hypothetical
protein Y51H4A.26 protein.
Length = 107
Score = 29.5 bits (63), Expect = 0.50
Identities = 18/53 (33%), Positives = 25/53 (47%), Gaps = 5/53 (9%)
Frame = +2
Query: 17 ARDCKEEAD-RCYRCNGTGHIARECAQSPDEPSCYNCNKTGH----IARNCPE 160
A+ C+ D + Y+ GH R+C D P Y C K G I +NCP+
Sbjct: 37 AKKCENYFDCQQYQTCIFGHCVRKCTSERDCPLGYICFKNGDGQRCIKKNCPK 89
>AC084159-15|AAK39353.1| 418|Caenorhabditis elegans Hypothetical
protein Y73B3A.13 protein.
Length = 418
Score = 29.5 bits (63), Expect = 0.50
Identities = 11/24 (45%), Positives = 13/24 (54%)
Frame = +2
Query: 188 CYNCNKSGHISRNCPDGTKTCYVC 259
C NCNK+ PD TK C +C
Sbjct: 281 CQNCNKALKYYDPIPDDTKLCLIC 304
>U62639-1|AAD09364.1| 925|Caenorhabditis elegans lr protein.
Length = 925
Score = 29.1 bits (62), Expect = 0.66
Identities = 24/94 (25%), Positives = 41/94 (43%), Gaps = 6/94 (6%)
Frame = +2
Query: 35 EADRCYRCNGTGHIARECAQSPDEPS-CYNCNKTGHIARNCPEGGRDNSNQTCYNC--NK 205
+AD + C+ G + C E C N T + + CP G D+ ++ C C +
Sbjct: 253 QADHMHSCSAAGMYS--CGTKGSEIGVCIPMNATCNGIKECPLG--DDESKHCSECARKR 308
Query: 206 SGHISRNCPDGTKTCYVCGKPGHISRD---CDEE 298
H N P G + C +C + ++ D C++E
Sbjct: 309 CDHTCMNTPHGAR-C-ICQEGYKLADDGLTCEDE 340
>AF185706-1|AAD56241.1| 925|Caenorhabditis elegans yolk receptor
RME-2 protein.
Length = 925
Score = 29.1 bits (62), Expect = 0.66
Identities = 24/94 (25%), Positives = 41/94 (43%), Gaps = 6/94 (6%)
Frame = +2
Query: 35 EADRCYRCNGTGHIARECAQSPDEPS-CYNCNKTGHIARNCPEGGRDNSNQTCYNC--NK 205
+AD + C+ G + C E C N T + + CP G D+ ++ C C +
Sbjct: 253 QADHMHSCSAAGMYS--CGTKGSEIGVCIPMNATCNGIKECPLG--DDESKHCSECARKR 308
Query: 206 SGHISRNCPDGTKTCYVCGKPGHISRD---CDEE 298
H N P G + C +C + ++ D C++E
Sbjct: 309 CDHTCMNTPHGAR-C-ICQEGYKLADDGLTCEDE 340
>AF036703-1|AAB88554.3| 925|Caenorhabditis elegans Receptor
mediated endocytosis protein2 protein.
Length = 925
Score = 29.1 bits (62), Expect = 0.66
Identities = 24/94 (25%), Positives = 41/94 (43%), Gaps = 6/94 (6%)
Frame = +2
Query: 35 EADRCYRCNGTGHIARECAQSPDEPS-CYNCNKTGHIARNCPEGGRDNSNQTCYNC--NK 205
+AD + C+ G + C E C N T + + CP G D+ ++ C C +
Sbjct: 253 QADHMHSCSAAGMYS--CGTKGSEIGVCIPMNATCNGIKECPLG--DDESKHCSECARKR 308
Query: 206 SGHISRNCPDGTKTCYVCGKPGHISRD---CDEE 298
H N P G + C +C + ++ D C++E
Sbjct: 309 CDHTCMNTPHGAR-C-ICQEGYKLADDGLTCEDE 340
>AF016439-2|AAB65897.1| 176|Caenorhabditis elegans Hypothetical
protein R02F11.1 protein.
Length = 176
Score = 28.7 bits (61), Expect = 0.87
Identities = 18/52 (34%), Positives = 23/52 (44%), Gaps = 2/52 (3%)
Frame = +2
Query: 113 CYNCNKTGHIARN-CPEGGRDNSNQTCYNCNKSGHISRNCPDGT-KTCYVCG 262
C + N TG CP G N+N C SG + +C +G T Y CG
Sbjct: 115 CQSGNSTGPCVNQVCPTGFMCNTNNYCCPLG-SGGVLGSCVNGVCPTGYTCG 165
>AC024794-1|AAK68497.1| 994|Caenorhabditis elegans Hypothetical
protein Y48G1BM.5 protein.
Length = 994
Score = 28.7 bits (61), Expect = 0.87
Identities = 14/46 (30%), Positives = 23/46 (50%)
Frame = +2
Query: 152 CPEGGRDNSNQTCYNCNKSGHISRNCPDGTKTCYVCGKPGHISRDC 289
CP +D+ QTC + + R C + + C +C P HI+ +C
Sbjct: 925 CPPCKKDHPLQTC--TMGAIEVKRFCINNGR-CTICSSPSHITGNC 967
>Z73907-1|CAA98124.1| 4753|Caenorhabditis elegans Hypothetical protein
F29D11.1 protein.
Length = 4753
Score = 28.3 bits (60), Expect = 1.2
Identities = 21/66 (31%), Positives = 29/66 (43%), Gaps = 1/66 (1%)
Frame = +2
Query: 47 CYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNCPEGGRDNSNQTCY-NCNKSGHISR 223
C T +CA + DE Y CN R+CPE +N+ C + K HI
Sbjct: 2805 CILLGATCDSKPDCADASDENPNY-CN-----TRSCPEDYNLCTNRRCIDSAKKCNHID- 2857
Query: 224 NCPDGT 241
+C DG+
Sbjct: 2858 DCGDGS 2863
>M96150-1|AAA28105.1| 4753|Caenorhabditis elegans LDL receptor-related
protein protein.
Length = 4753
Score = 28.3 bits (60), Expect = 1.2
Identities = 21/66 (31%), Positives = 29/66 (43%), Gaps = 1/66 (1%)
Frame = +2
Query: 47 CYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNCPEGGRDNSNQTCY-NCNKSGHISR 223
C T +CA + DE Y CN R+CPE +N+ C + K HI
Sbjct: 2805 CILLGATCDSKPDCADASDENPNY-CN-----TRSCPEDYNLCTNRRCIDSAKKCNHID- 2857
Query: 224 NCPDGT 241
+C DG+
Sbjct: 2858 DCGDGS 2863
>AL031630-5|CAA20985.1| 915|Caenorhabditis elegans Hypothetical
protein Y38H6C.5 protein.
Length = 915
Score = 28.3 bits (60), Expect = 1.2
Identities = 8/19 (42%), Positives = 13/19 (68%)
Frame = +2
Query: 248 CYVCGKPGHISRDCDEERN 304
CY CGK GH + +C +++
Sbjct: 411 CYYCGKRGHTANECRRKKS 429
Score = 27.1 bits (57), Expect = 2.7
Identities = 10/23 (43%), Positives = 11/23 (47%)
Frame = +2
Query: 110 SCYNCNKTGHIARNCPEGGRDNS 178
+CY C K GH A C D S
Sbjct: 410 NCYYCGKRGHTANECRRKKSDES 432
Score = 26.2 bits (55), Expect = 4.7
Identities = 9/22 (40%), Positives = 11/22 (50%)
Frame = +2
Query: 47 CYRCNGTGHIARECAQSPDEPS 112
CY C GH A EC + + S
Sbjct: 411 CYYCGKRGHTANECRRKKSDES 432
>Z81496-9|CAB04065.1| 153|Caenorhabditis elegans Hypothetical
protein F09C6.10 protein.
Length = 153
Score = 27.9 bits (59), Expect = 1.5
Identities = 17/77 (22%), Positives = 27/77 (35%)
Frame = +2
Query: 56 CNGTGHIARECAQSPDEPSCYNCNKTGHIARNCPEGGRDNSNQTCYNCNKSGHISRNCPD 235
C + E P +P C N+ + C G + T CN+ +I N
Sbjct: 36 CQSKCGVPLEIRMKPTKPGCKKWNECDDNEKQCASGPKLQIIYTNNVCNQFVNICENREY 95
Query: 236 GTKTCYVCGKPGHISRD 286
CG P +S++
Sbjct: 96 ANWNMQKCGIPHVVSKN 112
>U80847-7|AAO91744.1| 778|Caenorhabditis elegans Hypothetical
protein C17H11.6c protein.
Length = 778
Score = 27.9 bits (59), Expect = 1.5
Identities = 12/25 (48%), Positives = 15/25 (60%), Gaps = 1/25 (4%)
Frame = +2
Query: 230 PD-GTKTCYVCGKPGHISRDCDEER 301
PD GT CY C + H ++ CDE R
Sbjct: 198 PDCGTLFCYHCKREWHSNQTCDEAR 222
>U80847-6|AAK68190.1| 796|Caenorhabditis elegans Hypothetical
protein C17H11.6b protein.
Length = 796
Score = 27.9 bits (59), Expect = 1.5
Identities = 12/25 (48%), Positives = 15/25 (60%), Gaps = 1/25 (4%)
Frame = +2
Query: 230 PD-GTKTCYVCGKPGHISRDCDEER 301
PD GT CY C + H ++ CDE R
Sbjct: 198 PDCGTLFCYHCKREWHSNQTCDEAR 222
>U80847-5|AAK68189.1| 793|Caenorhabditis elegans Hypothetical
protein C17H11.6a protein.
Length = 793
Score = 27.9 bits (59), Expect = 1.5
Identities = 12/25 (48%), Positives = 15/25 (60%), Gaps = 1/25 (4%)
Frame = +2
Query: 230 PD-GTKTCYVCGKPGHISRDCDEER 301
PD GT CY C + H ++ CDE R
Sbjct: 198 PDCGTLFCYHCKREWHSNQTCDEAR 222
>Z54281-2|CAA91045.3| 399|Caenorhabditis elegans Hypothetical
protein F46C5.3 protein.
Length = 399
Score = 27.5 bits (58), Expect = 2.0
Identities = 14/31 (45%), Positives = 16/31 (51%), Gaps = 1/31 (3%)
Frame = +2
Query: 113 CYN-CNKTGHIARNCPEGGRDNSNQTCYNCN 202
CY+ C G +A NC GG N N C CN
Sbjct: 236 CYDSCRNAGQLA-NCANGGIPNPN-NCQVCN 264
>U00035-3|AAA50645.1| 548|Caenorhabditis elegans Egg sterile
(unfertilizable) protein2 protein.
Length = 548
Score = 27.5 bits (58), Expect = 2.0
Identities = 21/73 (28%), Positives = 29/73 (39%)
Frame = +2
Query: 23 DCKEEADRCYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNCPEGGRDNSNQTCYNCN 202
DC+ E+D CN A +C ++ C +K +C +G D C C
Sbjct: 241 DCENESDES-NCNKCQKGAHKCGKN-----CIKASKVCDGIPDCDDGS-DEHQCDCKTC- 292
Query: 203 KSGHISRNCPDGT 241
SG C DGT
Sbjct: 293 -SGSEKALCEDGT 304
>AL132895-2|CAC14404.1| 613|Caenorhabditis elegans Hypothetical
protein Y59A8A.2 protein.
Length = 613
Score = 27.5 bits (58), Expect = 2.0
Identities = 15/56 (26%), Positives = 25/56 (44%), Gaps = 4/56 (7%)
Frame = +2
Query: 53 RCNGTGHIARECAQSPDEPSCYNCNKTGHIARNCPE----GGRDNSNQTCYNCNKS 208
+ N T + R+ + + C C+K+ HI P R+N C+ CN+S
Sbjct: 524 KMNYTCVVCRKSTEQHKQTQCDECHKSYHIGCLSPPLTRLPKRNNFGWICHECNES 579
>AL117193-10|CAB60304.1| 337|Caenorhabditis elegans Hypothetical
protein Y105C5A.17 protein.
Length = 337
Score = 27.5 bits (58), Expect = 2.0
Identities = 12/38 (31%), Positives = 17/38 (44%)
Frame = +2
Query: 164 GRDNSNQTCYNCNKSGHISRNCPDGTKTCYVCGKPGHI 277
GRDNSN+ + C + S C VC G++
Sbjct: 189 GRDNSNEEWHGCGTTDCTSAGCKKNADGSNVCCCQGYL 226
>U80955-3|AAM97944.1| 95|Caenorhabditis elegans Mlp/crp family
(muscle lim protein/cysteine-rich protein) protein 1,
isoform a protein.
Length = 95
Score = 27.1 bits (57), Expect = 2.7
Identities = 11/43 (25%), Positives = 19/43 (44%)
Frame = +2
Query: 101 DEPSCYNCNKTGHIARNCPEGGRDNSNQTCYNCNKSGHISRNC 229
+ P C C K+ + A GG ++ C+ CN + +C
Sbjct: 7 EHPKCPKCGKSVYAAEEMSAGGY-KWHKFCFKCNMCNKLLDSC 48
>U80955-1|AAM97945.1| 113|Caenorhabditis elegans Mlp/crp family
(muscle lim protein/cysteine-rich protein) protein 1,
isoform b protein.
Length = 113
Score = 27.1 bits (57), Expect = 2.7
Identities = 11/43 (25%), Positives = 19/43 (44%)
Frame = +2
Query: 101 DEPSCYNCNKTGHIARNCPEGGRDNSNQTCYNCNKSGHISRNC 229
+ P C C K+ + A GG ++ C+ CN + +C
Sbjct: 7 EHPKCPKCGKSVYAAEEMSAGGY-KWHKFCFKCNMCNKLLDSC 48
>AF100656-7|AAF99964.2| 615|Caenorhabditis elegans Hypothetical
protein F49F1.8 protein.
Length = 615
Score = 27.1 bits (57), Expect = 2.7
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = +2
Query: 113 CYNCNKTGHIARNC 154
C+ C GH+ARNC
Sbjct: 576 CHYCKNVGHMARNC 589
>AF025471-8|AAB71060.1| 1019|Caenorhabditis elegans Hypothetical
protein R52.2 protein.
Length = 1019
Score = 27.1 bits (57), Expect = 2.7
Identities = 20/68 (29%), Positives = 29/68 (42%), Gaps = 9/68 (13%)
Frame = +2
Query: 113 CYNCNKTGHIARN--CP-----EGGRDNSNQT--CYNCNKSGHISRNCPDGTKTCYVCGK 265
C C+ T H+ R+ CP E + + C+ C +SGH C +TC C K
Sbjct: 314 CIFCSSTSHVHRHEECPIFNTAEARIQKAREIGLCFGCLRSGHQRSKC-SRPRTCNHC-K 371
Query: 266 PGHISRDC 289
H + C
Sbjct: 372 GNHHTVFC 379
>Z81491-10|CAB04023.3| 282|Caenorhabditis elegans Hypothetical
protein D1086.6 protein.
Length = 282
Score = 26.6 bits (56), Expect = 3.5
Identities = 13/50 (26%), Positives = 18/50 (36%)
Frame = +2
Query: 56 CNGTGHIARECAQSPDEPSCYNCNKTGHIARNCPEGGRDNSNQTCYNCNK 205
C I A +P E C NK + R C G + + C+K
Sbjct: 77 CQSACGIPHVLASNPTEEVCEKWNKCDDVKRQCAAAGGNYYAGANFQCSK 126
>Z75545-3|CAA99886.1| 922|Caenorhabditis elegans Hypothetical
protein K10D3.4 protein.
Length = 922
Score = 26.6 bits (56), Expect = 3.5
Identities = 11/22 (50%), Positives = 13/22 (59%)
Frame = +2
Query: 188 CYNCNKSGHISRNCPDGTKTCY 253
C N +G +S CPDG TCY
Sbjct: 704 CSNPGGNGRVSGGCPDG-YTCY 724
>Z49129-1|CAA88962.1| 262|Caenorhabditis elegans Hypothetical
protein T05B9.1 protein.
Length = 262
Score = 26.6 bits (56), Expect = 3.5
Identities = 20/73 (27%), Positives = 24/73 (32%), Gaps = 2/73 (2%)
Frame = +2
Query: 44 RCYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNCPEGGRDNSNQTC-YNCNKSGHIS 220
RC C H C Y K + R+C + + TC NC S
Sbjct: 146 RCMLCETDEHTIHSCPIYNTNSKRYEGFKDKGLCRSCALPANSDGSATCGRNCMFSRRRC 205
Query: 221 RNCPD-GTKTCYV 256
NC D G YV
Sbjct: 206 TNCWDKGGDKSYV 218
>AL117207-11|CAD54173.1| 97|Caenorhabditis elegans Hypothetical
protein Y60A3A.21 protein.
Length = 97
Score = 26.6 bits (56), Expect = 3.5
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = +2
Query: 176 SNQTCYNCNKSGHISRNCPDGTKTCYVCGK 265
S + CY+ +K SR C GT +VC K
Sbjct: 20 SAKRCYSGSKDRFESRQCDTGTAGNFVCQK 49
>AL021448-1|CAA16276.2| 898|Caenorhabditis elegans Hypothetical
protein Y2H9A.1 protein.
Length = 898
Score = 26.6 bits (56), Expect = 3.5
Identities = 14/42 (33%), Positives = 18/42 (42%)
Frame = +2
Query: 47 CYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNCPEGGRD 172
C CN H ++ A D C C + H+ P GGRD
Sbjct: 208 CNSCNLDHH--KQSAYVGDIAECALCLRAFHLTSCYPSGGRD 247
>AF233290-1|AAF62516.1| 898|Caenorhabditis elegans maternal-effect
sterile 4 protein.
Length = 898
Score = 26.6 bits (56), Expect = 3.5
Identities = 14/42 (33%), Positives = 18/42 (42%)
Frame = +2
Query: 47 CYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNCPEGGRD 172
C CN H ++ A D C C + H+ P GGRD
Sbjct: 208 CNSCNLDHH--KQSAYVGDIAECALCLRAFHLTSCYPSGGRD 247
>AC024809-9|AAO12399.1| 700|Caenorhabditis elegans Hypothetical
protein Y53G8AR.2b protein.
Length = 700
Score = 26.6 bits (56), Expect = 3.5
Identities = 13/46 (28%), Positives = 18/46 (39%), Gaps = 1/46 (2%)
Frame = +2
Query: 23 DCKEEADRCYRCNGTGH-IARECAQSPDEPSCYNCNKTGHIARNCP 157
D +E C CN H + + PD + C K H+ CP
Sbjct: 249 DVADEMVFCDMCNTCVHMVCAGIEELPDPAEPWKCAKCAHMGTPCP 294
>AC024809-8|AAF59546.2| 741|Caenorhabditis elegans Hypothetical
protein Y53G8AR.2a protein.
Length = 741
Score = 26.6 bits (56), Expect = 3.5
Identities = 13/46 (28%), Positives = 18/46 (39%), Gaps = 1/46 (2%)
Frame = +2
Query: 23 DCKEEADRCYRCNGTGH-IARECAQSPDEPSCYNCNKTGHIARNCP 157
D +E C CN H + + PD + C K H+ CP
Sbjct: 290 DVADEMVFCDMCNTCVHMVCAGIEELPDPAEPWKCAKCAHMGTPCP 335
>Z81532-7|CAJ34990.1| 363|Caenorhabditis elegans Hypothetical
protein F36F2.3b protein.
Length = 363
Score = 26.2 bits (55), Expect = 4.7
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = +2
Query: 185 TCYNCNKSGHISRNCP 232
TC C++ GH +NCP
Sbjct: 157 TCNRCSQPGHWYKNCP 172
Score = 25.8 bits (54), Expect = 6.2
Identities = 9/20 (45%), Positives = 12/20 (60%)
Frame = +2
Query: 230 PDGTKTCYVCGKPGHISRDC 289
P T TC C +PGH ++C
Sbjct: 152 PPPTYTCNRCSQPGHWYKNC 171
Score = 25.4 bits (53), Expect = 8.1
Identities = 8/20 (40%), Positives = 12/20 (60%)
Frame = +2
Query: 98 PDEPSCYNCNKTGHIARNCP 157
P +C C++ GH +NCP
Sbjct: 153 PPTYTCNRCSQPGHWYKNCP 172
>Z81532-6|CAB04326.3| 1128|Caenorhabditis elegans Hypothetical
protein F36F2.3a protein.
Length = 1128
Score = 26.2 bits (55), Expect = 4.7
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = +2
Query: 185 TCYNCNKSGHISRNCP 232
TC C++ GH +NCP
Sbjct: 157 TCNRCSQPGHWYKNCP 172
Score = 25.8 bits (54), Expect = 6.2
Identities = 9/20 (45%), Positives = 12/20 (60%)
Frame = +2
Query: 230 PDGTKTCYVCGKPGHISRDC 289
P T TC C +PGH ++C
Sbjct: 152 PPPTYTCNRCSQPGHWYKNC 171
Score = 25.4 bits (53), Expect = 8.1
Identities = 8/20 (40%), Positives = 12/20 (60%)
Frame = +2
Query: 98 PDEPSCYNCNKTGHIARNCP 157
P +C C++ GH +NCP
Sbjct: 153 PPTYTCNRCSQPGHWYKNCP 172
>Z30974-5|CAH19087.1| 3183|Caenorhabditis elegans Hypothetical protein
K08E5.3b protein.
Length = 3183
Score = 26.2 bits (55), Expect = 4.7
Identities = 26/81 (32%), Positives = 28/81 (34%), Gaps = 1/81 (1%)
Frame = +2
Query: 20 RDCKEEADRCYRCNGTGHIARECAQSPDEPSCYNCN-KTGHIARNCPEGGRDNSNQTCYN 196
RD E A C+G H C D Y C G+I N E GR C
Sbjct: 2743 RDVDECALGLNNCSGVAH----CI---DRAVGYTCKCPDGYIDGNPDEPGRVCGALLCDL 2795
Query: 197 CNKSGHISRNCPDGTKTCYVC 259
CN G N TC VC
Sbjct: 2796 CNAHGDCVHNTATNNITC-VC 2815
>Z30974-4|CAA83226.2| 3767|Caenorhabditis elegans Hypothetical protein
K08E5.3a protein.
Length = 3767
Score = 26.2 bits (55), Expect = 4.7
Identities = 26/81 (32%), Positives = 28/81 (34%), Gaps = 1/81 (1%)
Frame = +2
Query: 20 RDCKEEADRCYRCNGTGHIARECAQSPDEPSCYNCN-KTGHIARNCPEGGRDNSNQTCYN 196
RD E A C+G H C D Y C G+I N E GR C
Sbjct: 3327 RDVDECALGLNNCSGVAH----CI---DRAVGYTCKCPDGYIDGNPDEPGRVCGALLCDL 3379
Query: 197 CNKSGHISRNCPDGTKTCYVC 259
CN G N TC VC
Sbjct: 3380 CNAHGDCVHNTATNNITC-VC 3399
>Z30423-15|CAH19103.1| 3183|Caenorhabditis elegans Hypothetical
protein K08E5.3b protein.
Length = 3183
Score = 26.2 bits (55), Expect = 4.7
Identities = 26/81 (32%), Positives = 28/81 (34%), Gaps = 1/81 (1%)
Frame = +2
Query: 20 RDCKEEADRCYRCNGTGHIARECAQSPDEPSCYNCN-KTGHIARNCPEGGRDNSNQTCYN 196
RD E A C+G H C D Y C G+I N E GR C
Sbjct: 2743 RDVDECALGLNNCSGVAH----CI---DRAVGYTCKCPDGYIDGNPDEPGRVCGALLCDL 2795
Query: 197 CNKSGHISRNCPDGTKTCYVC 259
CN G N TC VC
Sbjct: 2796 CNAHGDCVHNTATNNITC-VC 2815
>Z30423-14|CAC42345.1| 3767|Caenorhabditis elegans Hypothetical
protein K08E5.3a protein.
Length = 3767
Score = 26.2 bits (55), Expect = 4.7
Identities = 26/81 (32%), Positives = 28/81 (34%), Gaps = 1/81 (1%)
Frame = +2
Query: 20 RDCKEEADRCYRCNGTGHIARECAQSPDEPSCYNCN-KTGHIARNCPEGGRDNSNQTCYN 196
RD E A C+G H C D Y C G+I N E GR C
Sbjct: 3327 RDVDECALGLNNCSGVAH----CI---DRAVGYTCKCPDGYIDGNPDEPGRVCGALLCDL 3379
Query: 197 CNKSGHISRNCPDGTKTCYVC 259
CN G N TC VC
Sbjct: 3380 CNAHGDCVHNTATNNITC-VC 3399
>U97017-1|AAB52363.1| 2643|Caenorhabditis elegans Temporarily
assigned gene nameprotein 162 protein.
Length = 2643
Score = 26.2 bits (55), Expect = 4.7
Identities = 20/70 (28%), Positives = 28/70 (40%), Gaps = 2/70 (2%)
Frame = +2
Query: 23 DCKEEADRCYRCNGTGHIARE--CAQSPDEPSCYNCNKTGHIARNCPEGGRDNSNQTCYN 196
DC++ +D C T + E C P Y C+ R P G RD S++
Sbjct: 66 DCQDSSDEPSTCKRTC-LENEFVCKTGKCLPRGYLCDSQYDCGR-LPNGDRDLSDEAPEL 123
Query: 197 CNKSGHISRN 226
CN+ H N
Sbjct: 124 CNQPLHCDYN 133
>U28971-1|AAA68376.2| 551|Caenorhabditis elegans Egg sterile
(unfertilizable) protein1 protein.
Length = 551
Score = 26.2 bits (55), Expect = 4.7
Identities = 22/85 (25%), Positives = 32/85 (37%), Gaps = 13/85 (15%)
Frame = +2
Query: 83 ECAQSPDEPSCYNCNKTGH-IARNCPEGGR---------DNSNQTCYNCNK-SGHISRNC 229
+CA + DE +C C H + C + D S++ +C + SG C
Sbjct: 241 DCADASDEKNCSKCQNNAHKCGKQCIKASHVCDGVAQCADGSDEQQCDCQRCSGTDKALC 300
Query: 230 PDGT--KTCYVCGKPGHISRDCDEE 298
DGT VC + DEE
Sbjct: 301 DDGTCIMRTQVCDGKKDCTDGMDEE 325
>AF139060-1|AAD29428.1| 3767|Caenorhabditis elegans transmembrane cell
adhesion receptorMUA-3 precursor protein.
Length = 3767
Score = 26.2 bits (55), Expect = 4.7
Identities = 26/81 (32%), Positives = 28/81 (34%), Gaps = 1/81 (1%)
Frame = +2
Query: 20 RDCKEEADRCYRCNGTGHIARECAQSPDEPSCYNCN-KTGHIARNCPEGGRDNSNQTCYN 196
RD E A C+G H C D Y C G+I N E GR C
Sbjct: 3327 RDVDECALGLNNCSGVAH----CI---DRAVGYTCKCPDGYIDGNPDEPGRVCGALLCDL 3379
Query: 197 CNKSGHISRNCPDGTKTCYVC 259
CN G N TC VC
Sbjct: 3380 CNAHGDCVHNTATNNITC-VC 3399
>AF039047-12|AAM15590.1| 226|Caenorhabditis elegans Hypothetical
protein K11D12.12 protein.
Length = 226
Score = 26.2 bits (55), Expect = 4.7
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = +1
Query: 205 VRAHLAQLPRRHQDLLRLRQARTYLSRLRRGAE 303
+R H A+ R+H+D+ RL + +RR AE
Sbjct: 178 IRQHEAEEKRQHRDVKRLAIEHGNMDEIRRKAE 210
>Z72510-3|CAA96653.1| 366|Caenorhabditis elegans Hypothetical
protein F53B7.4 protein.
Length = 366
Score = 22.6 bits (46), Expect(2) = 5.5
Identities = 10/21 (47%), Positives = 11/21 (52%)
Frame = +2
Query: 188 CYNCNKSGHISRNCPDGTKTC 250
CYNC+K S DG TC
Sbjct: 144 CYNCSKYCFSSSLECDGLDTC 164
Score = 21.8 bits (44), Expect(2) = 5.5
Identities = 7/16 (43%), Positives = 10/16 (62%)
Frame = +2
Query: 83 ECAQSPDEPSCYNCNK 130
E + P+ CYNC+K
Sbjct: 134 ESIRCPEYSLCYNCSK 149
>Z99270-3|CAL64001.1| 98|Caenorhabditis elegans Hypothetical
protein Y37A1A.4 protein.
Length = 98
Score = 25.8 bits (54), Expect = 6.2
Identities = 11/33 (33%), Positives = 18/33 (54%)
Frame = +1
Query: 208 RAHLAQLPRRHQDLLRLRQARTYLSRLRRGAEL 306
R+H++ RRH ++ A + +LRRG L
Sbjct: 7 RSHISPTLRRHSSNVKTYDAIQFRDKLRRGVSL 39
>Z82258-5|CAL63989.1| 98|Caenorhabditis elegans Hypothetical
protein Y37A1A.4 protein.
Length = 98
Score = 25.8 bits (54), Expect = 6.2
Identities = 11/33 (33%), Positives = 18/33 (54%)
Frame = +1
Query: 208 RAHLAQLPRRHQDLLRLRQARTYLSRLRRGAEL 306
R+H++ RRH ++ A + +LRRG L
Sbjct: 7 RSHISPTLRRHSSNVKTYDAIQFRDKLRRGVSL 39
>Z78019-5|CAB01455.1| 305|Caenorhabditis elegans Hypothetical
protein ZK863.7 protein.
Length = 305
Score = 25.8 bits (54), Expect = 6.2
Identities = 8/20 (40%), Positives = 11/20 (55%)
Frame = +2
Query: 41 DRCYRCNGTGHIARECAQSP 100
+RC+RC H +C Q P
Sbjct: 82 NRCFRCQSDEHRTPQCPQDP 101
>Z71181-6|CAA94899.1| 647|Caenorhabditis elegans Hypothetical
protein K07C5.6 protein.
Length = 647
Score = 25.8 bits (54), Expect = 6.2
Identities = 12/40 (30%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
Frame = +2
Query: 110 SCYNCNKTGHIARNCPEGGR-DNSNQTCYNCNKSGHISRN 226
+C NC GH R+C + R N+ +T N + ++ N
Sbjct: 114 ACENCGAMGHQKRDCFDRPRKSNAKETNDNIAEDDYVQPN 153
>U88314-8|AAF99888.1| 249|Caenorhabditis elegans Pharyngeal gland
toxin-relatedprotein 2 protein.
Length = 249
Score = 25.8 bits (54), Expect = 6.2
Identities = 19/88 (21%), Positives = 31/88 (35%), Gaps = 2/88 (2%)
Frame = +2
Query: 23 DCKEEADRCYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNC--PEGGRDNSNQTCYN 196
DC C N + ++C ++ S ++ T + P+ G +
Sbjct: 106 DCANRRALCNDANYFDVMTQQCPKTCGRCSSFSSTPTTGTCTDLKNPKTGTSDCASLRSF 165
Query: 197 CNKSGHISRNCPDGTKTCYVCGKPGHIS 280
CN S +I +TC CG G S
Sbjct: 166 CNDSNYIDLMRTQCPRTCGFCGSSGSSS 193
>U40933-1|AAA81672.1| 699|Caenorhabditis elegans Bbs (bardet-biedl
syndrome) proteinprotein 2 protein.
Length = 699
Score = 25.8 bits (54), Expect = 6.2
Identities = 13/36 (36%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Frame = +2
Query: 173 NSNQTCYNCNKSGHISRN-CPDGTKTCYVCGKPGHI 277
+S+ CY+ + + + RN PDG +C+V GK G +
Sbjct: 102 DSSVICYDVHNNLTVFRNDVPDGV-SCFVYGKLGEL 136
>U29096-4|AAA68408.1| 1599|Caenorhabditis elegans Hypothetical
protein F30H5.3 protein.
Length = 1599
Score = 25.8 bits (54), Expect = 6.2
Identities = 11/33 (33%), Positives = 13/33 (39%)
Frame = +2
Query: 152 CPEGGRDNSNQTCYNCNKSGHISRNCPDGTKTC 250
C G NS Y C G++ CP TC
Sbjct: 638 CSNSGAGNSCPVNYECYFDGYVWGCCPTKAYTC 670
>U21302-2|AAA92287.1| 305|Caenorhabditis elegans RNP-1 protein.
Length = 305
Score = 25.8 bits (54), Expect = 6.2
Identities = 8/20 (40%), Positives = 11/20 (55%)
Frame = +2
Query: 41 DRCYRCNGTGHIARECAQSP 100
+RC+RC H +C Q P
Sbjct: 82 NRCFRCQSDEHRTPQCPQDP 101
>Z81125-10|CAB03385.3| 3102|Caenorhabditis elegans Hypothetical
protein T22A3.8 protein.
Length = 3102
Score = 25.4 bits (53), Expect = 8.1
Identities = 18/78 (23%), Positives = 33/78 (42%), Gaps = 8/78 (10%)
Frame = +2
Query: 29 KEEADRCYRCNGTGHIAREC------AQSPDEPSCYNCNKT--GHIARNCPEGGRDNSNQ 184
+E+A R C+ G ++ C A++ +P C G C G R++
Sbjct: 416 REDACRTCECDPVGSVSDACVRDDQSAENGQKPGDCICKPGFGGRRCERCAPGYRNHPTC 475
Query: 185 TCYNCNKSGHISRNCPDG 238
CN++G ++ + DG
Sbjct: 476 EPCPCNRAGSVNFDTCDG 493
>Z79696-1|CAB01972.1| 1584|Caenorhabditis elegans Hypothetical protein
F54F3.1 protein.
Length = 1584
Score = 25.4 bits (53), Expect = 8.1
Identities = 20/71 (28%), Positives = 28/71 (39%), Gaps = 8/71 (11%)
Frame = +2
Query: 101 DEPSCYNCNKTGHIARNCPEGGRDNSNQTCYNCNKSGHI---SRNCPDGTKTC-----YV 256
+ P C NC+ + A+N G YN N GH+ +C D C V
Sbjct: 1199 ETPRCTNCSIHAYCAQNPTSGAYQCKCNAGYNGN--GHLCVSMSSCLDDRSLCDENADCV 1256
Query: 257 CGKPGHISRDC 289
G+ GH +C
Sbjct: 1257 PGEAGHYVCNC 1267
>AL008585-1|CAA15432.3| 3102|Caenorhabditis elegans Hypothetical
protein T22A3.8 protein.
Length = 3102
Score = 25.4 bits (53), Expect = 8.1
Identities = 18/78 (23%), Positives = 33/78 (42%), Gaps = 8/78 (10%)
Frame = +2
Query: 29 KEEADRCYRCNGTGHIAREC------AQSPDEPSCYNCNKT--GHIARNCPEGGRDNSNQ 184
+E+A R C+ G ++ C A++ +P C G C G R++
Sbjct: 416 REDACRTCECDPVGSVSDACVRDDQSAENGQKPGDCICKPGFGGRRCERCAPGYRNHPTC 475
Query: 185 TCYNCNKSGHISRNCPDG 238
CN++G ++ + DG
Sbjct: 476 EPCPCNRAGSVNFDTCDG 493
>AF099919-1|AAC68793.1| 273|Caenorhabditis elegans Hypothetical
protein F40G9.8 protein.
Length = 273
Score = 25.4 bits (53), Expect = 8.1
Identities = 10/33 (30%), Positives = 15/33 (45%)
Frame = +2
Query: 170 DNSNQTCYNCNKSGHISRNCPDGTKTCYVCGKP 268
D +T Y KS H+ ++ DG +C P
Sbjct: 119 DGPAKTFYEFEKSSHLQKSAYDGDTVHLICSIP 151
>AF074902-1|AAC26793.1| 3102|Caenorhabditis elegans laminin alpha
chain protein.
Length = 3102
Score = 25.4 bits (53), Expect = 8.1
Identities = 18/78 (23%), Positives = 33/78 (42%), Gaps = 8/78 (10%)
Frame = +2
Query: 29 KEEADRCYRCNGTGHIAREC------AQSPDEPSCYNCNKT--GHIARNCPEGGRDNSNQ 184
+E+A R C+ G ++ C A++ +P C G C G R++
Sbjct: 416 REDACRTCECDPVGSVSDACVRDDQSAENGQKPGDCICKPGFGGRRCERCAPGYRNHPTC 475
Query: 185 TCYNCNKSGHISRNCPDG 238
CN++G ++ + DG
Sbjct: 476 EPCPCNRAGSVNFDTCDG 493
>AF016668-3|AAO12441.1| 126|Caenorhabditis elegans Hypothetical
protein F36H9.7 protein.
Length = 126
Score = 25.4 bits (53), Expect = 8.1
Identities = 10/37 (27%), Positives = 19/37 (51%), Gaps = 2/37 (5%)
Frame = +2
Query: 50 YRCNGTGHIARECAQSPDE--PSCYNCNKTGHIARNC 154
++ +GT ++ + CA+ D+ C N G A+ C
Sbjct: 56 HKADGTYYVEKRCAEKTDDLTDGCINIGIRGIAAKQC 92
>AC006827-4|AAF60881.1| 579|Caenorhabditis elegans Hypothetical
protein Y81B9A.1 protein.
Length = 579
Score = 25.4 bits (53), Expect = 8.1
Identities = 12/37 (32%), Positives = 14/37 (37%), Gaps = 2/37 (5%)
Frame = +2
Query: 188 CYNCNKSGHISRNCPDGTKTCYVCGKPGHISRD--CD 292
C CN H+ CY CG GH + CD
Sbjct: 33 CGGCNTRSHMHPRGECQRVGCYQCGSMGHATAQALCD 69
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,436,918
Number of Sequences: 27780
Number of extensions: 111267
Number of successful extensions: 856
Number of sequences better than 10.0: 96
Number of HSP's better than 10.0 without gapping: 522
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 727
length of database: 12,740,198
effective HSP length: 71
effective length of database: 10,767,818
effective search space used: 333802358
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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