Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0022_F23
         (283 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative methopren...    27   0.17 
CR954256-6|CAJ14147.1|  207|Anopheles gambiae predicted protein ...    23   1.6  
AY344835-1|AAR05806.1|  334|Anopheles gambiae ICHIT protein.           22   3.8  
AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical prote...    21   6.6  

>DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative
           methoprene-tolerant protein protein.
          Length = 1115

 Score = 26.6 bits (56), Expect = 0.17
 Identities = 13/33 (39%), Positives = 18/33 (54%)
 Frame = +1

Query: 97  CFRYGESDPRNPTASSC*KTRCGESQRGKEAKS 195
           CFR  +S PR  ++SS   T+ G +  G  A S
Sbjct: 439 CFRRADSAPRGSSSSSSSATKAGAAGAGGTAGS 471


>CR954256-6|CAJ14147.1|  207|Anopheles gambiae predicted protein
           protein.
          Length = 207

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 14/46 (30%), Positives = 24/46 (52%)
 Frame = +3

Query: 87  SFCVFSIWRVRPKESNSF*LLKNALRRKSARQGSEKQNA*SRPRRR 224
           +F   +I R RP++SN   + K   +R+ A + +      +RP RR
Sbjct: 17  NFTKSAINRKRPEKSNGSTVKKTIRKRRPALRSTSGVLRAARPERR 62


>AY344835-1|AAR05806.1|  334|Anopheles gambiae ICHIT protein.
          Length = 334

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 9/20 (45%), Positives = 11/20 (55%)
 Frame = -3

Query: 269 TAFHAPVCTSQLHLEPPPWP 210
           T  HAP  T+    +PPP P
Sbjct: 229 TTTHAPTTTTTWSDQPPPPP 248


>AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical protein
            protein.
          Length = 1645

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 10/32 (31%), Positives = 15/32 (46%)
 Frame = +1

Query: 130  PTASSC*KTRCGESQRGKEAKSKTPKAGQGGG 225
            P A +   T+  E +    A  K P++  GGG
Sbjct: 1537 PPAPATATTKSVEREEPVRASGKAPESESGGG 1568


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 232,486
Number of Sequences: 2352
Number of extensions: 3834
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 563,979
effective HSP length: 55
effective length of database: 434,619
effective search space used: 16515522
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)