Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0022_F23
         (283 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    23   0.71 
AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              21   3.8  
DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.               20   6.7  
DQ667192-1|ABG75744.1|  489|Apis mellifera pH-sensitive chloride...    19   8.8  
DQ667191-1|ABG75743.1|  475|Apis mellifera pH-sensitive chloride...    19   8.8  
DQ667190-1|ABG75742.1|  509|Apis mellifera pH-sensitive chloride...    19   8.8  
DQ667189-1|ABG75741.1|  458|Apis mellifera pH-sensitive chloride...    19   8.8  
AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly pro...    19   8.8  

>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 23.0 bits (47), Expect = 0.71
 Identities = 11/37 (29%), Positives = 19/37 (51%)
 Frame = +1

Query: 109 GESDPRNPTASSC*KTRCGESQRGKEAKSKTPKAGQG 219
           GE+ PR+P AS     +C  +       +++P+  QG
Sbjct: 734 GEASPRSPNASPSPAEQCAST---TTITARSPQGSQG 767


>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 20.6 bits (41), Expect = 3.8
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = -1

Query: 121 GLTRHIENTQKLCRPRPSTRTETR 50
           G+TR I +     +P P+T +E R
Sbjct: 481 GITRDISSLVVQEQPTPTTESEER 504


>DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.
          Length = 828

 Score = 19.8 bits (39), Expect = 6.7
 Identities = 9/26 (34%), Positives = 15/26 (57%)
 Frame = +1

Query: 151 KTRCGESQRGKEAKSKTPKAGQGGGS 228
           K +  E   GKE+K+K  +  + GG+
Sbjct: 213 KKKEDEIDEGKESKTKLSQWRKDGGT 238


>DQ667192-1|ABG75744.1|  489|Apis mellifera pH-sensitive chloride
           channel variant 4 protein.
          Length = 489

 Score = 19.4 bits (38), Expect = 8.8
 Identities = 6/13 (46%), Positives = 9/13 (69%)
 Frame = -3

Query: 248 CTSQLHLEPPPWP 210
           CT++L  + PP P
Sbjct: 443 CTAELRKKEPPHP 455


>DQ667191-1|ABG75743.1|  475|Apis mellifera pH-sensitive chloride
           channel variant 3 protein.
          Length = 475

 Score = 19.4 bits (38), Expect = 8.8
 Identities = 6/13 (46%), Positives = 9/13 (69%)
 Frame = -3

Query: 248 CTSQLHLEPPPWP 210
           CT++L  + PP P
Sbjct: 429 CTAELRKKEPPHP 441


>DQ667190-1|ABG75742.1|  509|Apis mellifera pH-sensitive chloride
           channel variant 1 protein.
          Length = 509

 Score = 19.4 bits (38), Expect = 8.8
 Identities = 6/13 (46%), Positives = 9/13 (69%)
 Frame = -3

Query: 248 CTSQLHLEPPPWP 210
           CT++L  + PP P
Sbjct: 463 CTAELRKKEPPHP 475


>DQ667189-1|ABG75741.1|  458|Apis mellifera pH-sensitive chloride
           channel protein.
          Length = 458

 Score = 19.4 bits (38), Expect = 8.8
 Identities = 6/13 (46%), Positives = 9/13 (69%)
 Frame = -3

Query: 248 CTSQLHLEPPPWP 210
           CT++L  + PP P
Sbjct: 412 CTAELRKKEPPHP 424


>AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly
           protein MRJP5 protein.
          Length = 598

 Score = 19.4 bits (38), Expect = 8.8
 Identities = 6/11 (54%), Positives = 8/11 (72%)
 Frame = -1

Query: 106 IENTQKLCRPR 74
           I NTQ +C P+
Sbjct: 147 INNTQPMCSPK 157


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 63,719
Number of Sequences: 438
Number of extensions: 1081
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 49
effective length of database: 124,881
effective search space used:  5494764
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)