Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0022_F21
         (399 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM158085-1|CAJ43389.1|  171|Apis mellifera globin 1 protein.           24   0.56 
AM158084-1|CAJ43388.1|  171|Apis mellifera globin 1 protein.           24   0.56 
AF514804-1|AAM51823.1|  537|Apis mellifera neuronal nicotinic ac...    21   3.9  
AF388659-3|AAK71993.1|  548|Apis mellifera 1D-myo-inositol-trisp...    21   3.9  
AF388659-2|AAK71994.1|  463|Apis mellifera 1D-myo-inositol-trisp...    21   3.9  
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    21   3.9  
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    20   9.1  

>AM158085-1|CAJ43389.1|  171|Apis mellifera globin 1 protein.
          Length = 171

 Score = 24.2 bits (50), Expect = 0.56
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = +1

Query: 88  FKKYPNIKRWYEAVRSTAPGYQEANEK 168
           FKKYP  +R++ A   T      AN++
Sbjct: 55  FKKYPEYQRYFTAFMDTPLNELPANKR 81


>AM158084-1|CAJ43388.1|  171|Apis mellifera globin 1 protein.
          Length = 171

 Score = 24.2 bits (50), Expect = 0.56
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = +1

Query: 88  FKKYPNIKRWYEAVRSTAPGYQEANEK 168
           FKKYP  +R++ A   T      AN++
Sbjct: 55  FKKYPEYQRYFTAFMDTPLNELPANKR 81


>AF514804-1|AAM51823.1|  537|Apis mellifera neuronal nicotinic
           acetylcholine receptoralpha-3 protein.
          Length = 537

 Score = 21.4 bits (43), Expect = 3.9
 Identities = 8/20 (40%), Positives = 14/20 (70%)
 Frame = +2

Query: 74  RPISTSKNTLTLKGGMKQSE 133
           RP+  +  TLT++ G+K S+
Sbjct: 50  RPVMNNTETLTVQLGLKLSQ 69


>AF388659-3|AAK71993.1|  548|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
          Length = 548

 Score = 21.4 bits (43), Expect = 3.9
 Identities = 12/39 (30%), Positives = 19/39 (48%)
 Frame = +1

Query: 76  SDIDFKKYPNIKRWYEAVRSTAPGYQEANEKGLEAFKSL 192
           S  DFK     ++  EA+R    GY  A  K ++  K++
Sbjct: 426 SSKDFKTTRTREQVTEALRRFVEGYPHAVPKYIQRLKAI 464


>AF388659-2|AAK71994.1|  463|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform B protein.
          Length = 463

 Score = 21.4 bits (43), Expect = 3.9
 Identities = 12/39 (30%), Positives = 19/39 (48%)
 Frame = +1

Query: 76  SDIDFKKYPNIKRWYEAVRSTAPGYQEANEKGLEAFKSL 192
           S  DFK     ++  EA+R    GY  A  K ++  K++
Sbjct: 341 SSKDFKTTRTREQVTEALRRFVEGYPHAVPKYIQRLKAI 379


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 21.4 bits (43), Expect = 3.9
 Identities = 12/39 (30%), Positives = 19/39 (48%)
 Frame = +1

Query: 76  SDIDFKKYPNIKRWYEAVRSTAPGYQEANEKGLEAFKSL 192
           S  DFK     ++  EA+R    GY  A  K ++  K++
Sbjct: 660 SSKDFKTTRTREQVTEALRRFVEGYPHAVPKYIQRLKAI 698


>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
            protein.
          Length = 1370

 Score = 20.2 bits (40), Expect = 9.1
 Identities = 7/21 (33%), Positives = 10/21 (47%)
 Frame = +3

Query: 225  NVHSKIITSYFLCFYTGNVSP 287
            N H  +  S   C+Y G+  P
Sbjct: 943  NAHKVVDASDVWCYYGGDARP 963


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 93,399
Number of Sequences: 438
Number of extensions: 1718
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used:  9885360
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)