Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0022_F19
         (367 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY531877-1|AAT08872.1|  247|Tribolium castaneum ORF1p protein.         21   3.0  
L01617-1|AAA30097.1|   46|Tribolium castaneum zinc finger protei...    20   6.9  
DQ855491-1|ABH88178.1|  144|Tribolium castaneum chemosensory pro...    20   9.1  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    20   9.1  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    20   9.1  

>AY531877-1|AAT08872.1|  247|Tribolium castaneum ORF1p protein.
          Length = 247

 Score = 21.4 bits (43), Expect = 3.0
 Identities = 14/36 (38%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
 Frame = +3

Query: 171 KVAKSASGSTSRSVAILNTSHL-KQLLGNRGRHNSS 275
           K+ K A  +T ++   LN+  L +Q   +RGRHN S
Sbjct: 179 KIPK-AKINTGKTQYNLNSKSLPRQYSQSRGRHNQS 213


>L01617-1|AAA30097.1|   46|Tribolium castaneum zinc finger protein
           protein.
          Length = 46

 Score = 20.2 bits (40), Expect = 6.9
 Identities = 6/10 (60%), Positives = 8/10 (80%)
 Frame = -3

Query: 353 KPHTVPCKVT 324
           + HT+PCK T
Sbjct: 2   RTHTLPCKCT 11


>DQ855491-1|ABH88178.1|  144|Tribolium castaneum chemosensory
           protein 5 protein.
          Length = 144

 Score = 19.8 bits (39), Expect = 9.1
 Identities = 7/11 (63%), Positives = 10/11 (90%)
 Frame = +1

Query: 88  DFVSGISLHKS 120
           DFV+G +LH+S
Sbjct: 18  DFVNGKTLHRS 28


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 19.8 bits (39), Expect = 9.1
 Identities = 10/21 (47%), Positives = 12/21 (57%)
 Frame = -3

Query: 347 HTVPCKVTGKCGSVTVRLIPA 285
           HT   K+ G  GSV +R  PA
Sbjct: 246 HTGLQKMDGLYGSVVIRQPPA 266


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 19.8 bits (39), Expect = 9.1
 Identities = 10/21 (47%), Positives = 12/21 (57%)
 Frame = -3

Query: 347 HTVPCKVTGKCGSVTVRLIPA 285
           HT   K+ G  GSV +R  PA
Sbjct: 246 HTGLQKMDGLYGSVVIRQPPA 266


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 80,383
Number of Sequences: 336
Number of extensions: 1717
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 50
effective length of database: 105,785
effective search space used:  7510735
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)