Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0022_F19
(367 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U01335-1|AAA87053.1| 267|Drosophila melanogaster ribosomal prot... 158 2e-39
U01334-1|AAC34198.1| 267|Drosophila melanogaster ribosomal prot... 158 2e-39
AY094799-1|AAM11152.1| 267|Drosophila melanogaster LD24077p pro... 158 2e-39
AE014134-1713|AAF52822.1| 267|Drosophila melanogaster CG5920-PA... 158 2e-39
X69120-1|CAA48872.1| 267|Drosophila melanogaster ribosoaml prot... 157 4e-39
AE014296-2238|AAF49848.1| 954|Drosophila melanogaster CG11274-P... 30 0.81
X77234-1|CAA54451.1| 511|Drosophila melanogaster dopamine recep... 29 1.9
BT030444-1|ABP87886.1| 496|Drosophila melanogaster IP03060p pro... 29 1.9
AE014297-1812|AAF55030.2| 511|Drosophila melanogaster CG9652-PA... 29 1.9
BT001365-1|AAN71120.1| 844|Drosophila melanogaster AT30147p pro... 28 3.3
AE014297-1809|AAN13596.1| 844|Drosophila melanogaster CG31533-P... 28 3.3
AY051622-1|AAK93046.1| 456|Drosophila melanogaster GH27042p pro... 28 4.3
AE014298-950|AAF46198.2| 456|Drosophila melanogaster CG3135-PA ... 28 4.3
AE014297-2962|AAF55871.2| 742|Drosophila melanogaster CG5892-PA... 28 4.3
AY089365-1|AAL90103.1| 508|Drosophila melanogaster AT18767p pro... 27 5.7
AE014296-2428|AAF49706.1| 508|Drosophila melanogaster CG17173-P... 27 5.7
Y07567-1|CAA68852.1| 774|Drosophila melanogaster TF125 type II ... 27 7.5
Y00843-1|CAA68766.1| 410|Drosophila melanogaster protein ( Dros... 27 7.5
X98235-1|CAA66887.1| 1182|Drosophila melanogaster TF125 protein. 27 7.5
BT025227-1|ABF17918.1| 418|Drosophila melanogaster FI01011p pro... 27 7.5
AY119136-1|AAM50996.1| 418|Drosophila melanogaster RE37758p pro... 27 7.5
AY058767-1|AAL13996.1| 1371|Drosophila melanogaster SD04244p pro... 27 7.5
AE014297-3402|AAF56201.2| 1182|Drosophila melanogaster CG13598-P... 27 7.5
AE014297-3401|AAO41596.1| 1362|Drosophila melanogaster CG13598-P... 27 7.5
AE014134-1019|AAF52323.2| 418|Drosophila melanogaster CG11607-P... 27 7.5
BT010042-1|AAQ22511.1| 2045|Drosophila melanogaster LD36052p pro... 27 10.0
AY089224-1|AAL89962.1| 1117|Drosophila melanogaster AT01932p pro... 27 10.0
AE014298-1084|AAF46292.2| 1117|Drosophila melanogaster CG1514-PA... 27 10.0
AE014296-105|AAF47389.1| 2262|Drosophila melanogaster CG17046-PA... 27 10.0
AE014296-104|ABI31227.1| 2045|Drosophila melanogaster CG17046-PB... 27 10.0
>U01335-1|AAA87053.1| 267|Drosophila melanogaster ribosomal protein
S2 protein.
Length = 267
Score = 158 bits (384), Expect = 2e-39
Identities = 72/98 (73%), Positives = 80/98 (81%)
Frame = -3
Query: 365 NKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTG 186
NKIGKPHTVPCKVTGKCGSV+VRLIPAPRGTGIVSAPVPKKLL MAG++DCYTSARGSTG
Sbjct: 155 NKIGKPHTVPCKVTGKCGSVSVRLIPAPRGTGIVSAPVPKKLLTMAGIEDCYTSARGSTG 214
Query: 185 TLGNFXXXXXXXXXXXXXYLTPDLWRDIPLTKSPYSDF 72
TLGNF YLTPDLW+++PL +PY +
Sbjct: 215 TLGNFAKATYAAIAKTYAYLTPDLWKEMPLGSTPYQAY 252
>U01334-1|AAC34198.1| 267|Drosophila melanogaster ribosomal protein
S2 protein.
Length = 267
Score = 158 bits (384), Expect = 2e-39
Identities = 72/98 (73%), Positives = 80/98 (81%)
Frame = -3
Query: 365 NKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTG 186
NKIGKPHTVPCKVTGKCGSV+VRLIPAPRGTGIVSAPVPKKLL MAG++DCYTSARGSTG
Sbjct: 155 NKIGKPHTVPCKVTGKCGSVSVRLIPAPRGTGIVSAPVPKKLLTMAGIEDCYTSARGSTG 214
Query: 185 TLGNFXXXXXXXXXXXXXYLTPDLWRDIPLTKSPYSDF 72
TLGNF YLTPDLW+++PL +PY +
Sbjct: 215 TLGNFAKATYAAIAKTYAYLTPDLWKEMPLGSTPYQAY 252
>AY094799-1|AAM11152.1| 267|Drosophila melanogaster LD24077p
protein.
Length = 267
Score = 158 bits (384), Expect = 2e-39
Identities = 72/98 (73%), Positives = 80/98 (81%)
Frame = -3
Query: 365 NKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTG 186
NKIGKPHTVPCKVTGKCGSV+VRLIPAPRGTGIVSAPVPKKLL MAG++DCYTSARGSTG
Sbjct: 155 NKIGKPHTVPCKVTGKCGSVSVRLIPAPRGTGIVSAPVPKKLLTMAGIEDCYTSARGSTG 214
Query: 185 TLGNFXXXXXXXXXXXXXYLTPDLWRDIPLTKSPYSDF 72
TLGNF YLTPDLW+++PL +PY +
Sbjct: 215 TLGNFAKATYAAIAKTYAYLTPDLWKEMPLGSTPYQAY 252
>AE014134-1713|AAF52822.1| 267|Drosophila melanogaster CG5920-PA
protein.
Length = 267
Score = 158 bits (384), Expect = 2e-39
Identities = 72/98 (73%), Positives = 80/98 (81%)
Frame = -3
Query: 365 NKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTG 186
NKIGKPHTVPCKVTGKCGSV+VRLIPAPRGTGIVSAPVPKKLL MAG++DCYTSARGSTG
Sbjct: 155 NKIGKPHTVPCKVTGKCGSVSVRLIPAPRGTGIVSAPVPKKLLTMAGIEDCYTSARGSTG 214
Query: 185 TLGNFXXXXXXXXXXXXXYLTPDLWRDIPLTKSPYSDF 72
TLGNF YLTPDLW+++PL +PY +
Sbjct: 215 TLGNFAKATYAAIAKTYAYLTPDLWKEMPLGSTPYQAY 252
>X69120-1|CAA48872.1| 267|Drosophila melanogaster ribosoaml protein
S2 protein.
Length = 267
Score = 157 bits (381), Expect = 4e-39
Identities = 71/98 (72%), Positives = 80/98 (81%)
Frame = -3
Query: 365 NKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTG 186
NKIGKPHTVPCKVTGKCGSV+VRLIPAPRGTGIVSAPVP+KLL MAG++DCYTSARGSTG
Sbjct: 155 NKIGKPHTVPCKVTGKCGSVSVRLIPAPRGTGIVSAPVPRKLLTMAGIEDCYTSARGSTG 214
Query: 185 TLGNFXXXXXXXXXXXXXYLTPDLWRDIPLTKSPYSDF 72
TLGNF YLTPDLW+++PL +PY +
Sbjct: 215 TLGNFAKATYAAIAKTYAYLTPDLWKEMPLGSTPYQAY 252
>AE014296-2238|AAF49848.1| 954|Drosophila melanogaster CG11274-PA
protein.
Length = 954
Score = 30.3 bits (65), Expect = 0.81
Identities = 13/41 (31%), Positives = 23/41 (56%)
Frame = -3
Query: 350 PHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMA 228
PH+V K G G + + L+P G G+++ + K+L + A
Sbjct: 907 PHSVAAKRNGNAGKLAL-LLPGASGAGVINEDLEKQLRERA 946
>X77234-1|CAA54451.1| 511|Drosophila melanogaster dopamine receptor
protein.
Length = 511
Score = 29.1 bits (62), Expect = 1.9
Identities = 20/61 (32%), Positives = 29/61 (47%)
Frame = +3
Query: 117 VRCQICVSLGNGCICSFRKVAKSASGSTSRSVAILNTSHLKQLLGNRGRHNSSTTGSGDQ 296
+R ++ G G + + VA S + S S S I+NTS + GN H S +TG
Sbjct: 20 MRAIAAIAAGVGSVAA--TVATSTTSSISSSTTIINTSSATTIGGN---HTSGSTGFSTN 74
Query: 297 S 299
S
Sbjct: 75 S 75
>BT030444-1|ABP87886.1| 496|Drosophila melanogaster IP03060p
protein.
Length = 496
Score = 29.1 bits (62), Expect = 1.9
Identities = 20/61 (32%), Positives = 29/61 (47%)
Frame = +3
Query: 117 VRCQICVSLGNGCICSFRKVAKSASGSTSRSVAILNTSHLKQLLGNRGRHNSSTTGSGDQ 296
+R ++ G G + + VA S + S S S I+NTS + GN H S +TG
Sbjct: 20 MRAIAAIAAGVGSVAA--TVATSTTSSISSSTTIINTSSATTIGGN---HTSGSTGFSTN 74
Query: 297 S 299
S
Sbjct: 75 S 75
>AE014297-1812|AAF55030.2| 511|Drosophila melanogaster CG9652-PA
protein.
Length = 511
Score = 29.1 bits (62), Expect = 1.9
Identities = 20/61 (32%), Positives = 29/61 (47%)
Frame = +3
Query: 117 VRCQICVSLGNGCICSFRKVAKSASGSTSRSVAILNTSHLKQLLGNRGRHNSSTTGSGDQ 296
+R ++ G G + + VA S + S S S I+NTS + GN H S +TG
Sbjct: 20 MRAIAAIAAGVGSVAA--TVATSTTSSISSSTTIINTSSATTIGGN---HTSGSTGFSTN 74
Query: 297 S 299
S
Sbjct: 75 S 75
>BT001365-1|AAN71120.1| 844|Drosophila melanogaster AT30147p
protein.
Length = 844
Score = 28.3 bits (60), Expect = 3.3
Identities = 15/46 (32%), Positives = 18/46 (39%)
Frame = -2
Query: 348 SHSALQGHRKVWFSHS*IDPRSPWYWNCVCPCSQEVASNGWCSGLL 211
SH GH+ S S + R W W C E NGW G +
Sbjct: 517 SHHPKAGHKNCISSSSIVSRRHGWNWTKSC----EARKNGWRPGAI 558
>AE014297-1809|AAN13596.1| 844|Drosophila melanogaster CG31533-PA
protein.
Length = 844
Score = 28.3 bits (60), Expect = 3.3
Identities = 15/46 (32%), Positives = 18/46 (39%)
Frame = -2
Query: 348 SHSALQGHRKVWFSHS*IDPRSPWYWNCVCPCSQEVASNGWCSGLL 211
SH GH+ S S + R W W C E NGW G +
Sbjct: 517 SHHPKAGHKNCISSSSIVSRRHGWNWTKSC----EARKNGWRPGAI 558
>AY051622-1|AAK93046.1| 456|Drosophila melanogaster GH27042p
protein.
Length = 456
Score = 27.9 bits (59), Expect = 4.3
Identities = 14/48 (29%), Positives = 22/48 (45%)
Frame = -2
Query: 297 IDPRSPWYWNCVCPCSQEVASNGWCSGLLHFCSWIHWHSWQLCESYIC 154
ID +P + CS + NG+C+ H C ++ Q CE+ C
Sbjct: 269 IDASNPTSLTTLQECSLKCGKNGYCNE-HHICKCNVGYTGQYCETAFC 315
>AE014298-950|AAF46198.2| 456|Drosophila melanogaster CG3135-PA
protein.
Length = 456
Score = 27.9 bits (59), Expect = 4.3
Identities = 14/48 (29%), Positives = 22/48 (45%)
Frame = -2
Query: 297 IDPRSPWYWNCVCPCSQEVASNGWCSGLLHFCSWIHWHSWQLCESYIC 154
ID +P + CS + NG+C+ H C ++ Q CE+ C
Sbjct: 269 IDASNPTSLTTLQECSLKCGKNGYCNE-HHICKCNVGYTGQYCETAFC 315
>AE014297-2962|AAF55871.2| 742|Drosophila melanogaster CG5892-PA
protein.
Length = 742
Score = 27.9 bits (59), Expect = 4.3
Identities = 19/52 (36%), Positives = 26/52 (50%)
Frame = +3
Query: 183 SASGSTSRSVAILNTSHLKQLLGNRGRHNSSTTGSGDQSNCD*TTLSCDLAR 338
+ASGST L + L+QLLGN GR + T ++C T + L R
Sbjct: 132 AASGSTLLGKYCLASLPLQQLLGNVGRMMNVQTAVCFPASCSATNMDTLLRR 183
>AY089365-1|AAL90103.1| 508|Drosophila melanogaster AT18767p
protein.
Length = 508
Score = 27.5 bits (58), Expect = 5.7
Identities = 15/41 (36%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Frame = +2
Query: 179 QECQWIHEQKCSNPEHQ-PFEATSWEQGQTQFQYHGERGSI 298
Q C+W S+PE Q FE+ Q+QFQ+ G + S+
Sbjct: 288 QSCRW---DSVSDPECQRDFESRLLRSSQSQFQHMGAQSSL 325
>AE014296-2428|AAF49706.1| 508|Drosophila melanogaster CG17173-PA
protein.
Length = 508
Score = 27.5 bits (58), Expect = 5.7
Identities = 15/41 (36%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Frame = +2
Query: 179 QECQWIHEQKCSNPEHQ-PFEATSWEQGQTQFQYHGERGSI 298
Q C+W S+PE Q FE+ Q+QFQ+ G + S+
Sbjct: 288 QSCRW---DSVSDPECQRDFESRLLRSSQSQFQHMGAQSSL 325
>Y07567-1|CAA68852.1| 774|Drosophila melanogaster TF125 type II
protein.
Length = 774
Score = 27.1 bits (57), Expect = 7.5
Identities = 20/57 (35%), Positives = 29/57 (50%), Gaps = 6/57 (10%)
Frame = +3
Query: 144 GNGCICSFRKVAKSASGSTSRSVAILNTS-----HLKQLLGNRGRHNSSTT-GSGDQ 296
G G I S +AS S+S S ILN+ H + + G+ N +T+ GSG+Q
Sbjct: 394 GGGYIVSQPSPVAAASSSSSSSTVILNSGGAKLLHHQIITSQAGQINQATSGGSGNQ 450
>Y00843-1|CAA68766.1| 410|Drosophila melanogaster protein (
Drosophila melanogasterH2.0 homeobox gene. ).
Length = 410
Score = 27.1 bits (57), Expect = 7.5
Identities = 18/59 (30%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Frame = +3
Query: 174 VAKSASGSTSRSVAILNTSHLKQLLGNRGR--HNSSTTGSGDQSNCD*TTLSCDLARHC 344
V+ S + +TS + L+ S + +LLG+ H S++ +S CD + L+C HC
Sbjct: 48 VSTSPTSATSTTKVKLSFS-VDRLLGSEPEESHRQSSSSPSTKSCCDGSILACCSFPHC 105
>X98235-1|CAA66887.1| 1182|Drosophila melanogaster TF125 protein.
Length = 1182
Score = 27.1 bits (57), Expect = 7.5
Identities = 20/57 (35%), Positives = 29/57 (50%), Gaps = 6/57 (10%)
Frame = +3
Query: 144 GNGCICSFRKVAKSASGSTSRSVAILNTS-----HLKQLLGNRGRHNSSTT-GSGDQ 296
G G I S +AS S+S S ILN+ H + + G+ N +T+ GSG+Q
Sbjct: 643 GGGYIVSQPSPVAAASSSSSSSTVILNSGGAKLLHHQIITSQAGQINQATSGGSGNQ 699
>BT025227-1|ABF17918.1| 418|Drosophila melanogaster FI01011p
protein.
Length = 418
Score = 27.1 bits (57), Expect = 7.5
Identities = 18/59 (30%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Frame = +3
Query: 174 VAKSASGSTSRSVAILNTSHLKQLLGNRGR--HNSSTTGSGDQSNCD*TTLSCDLARHC 344
V+ S + +TS + L+ S + +LLG+ H S++ +S CD + L+C HC
Sbjct: 57 VSTSPTSATSTTKVKLSFS-VDRLLGSEPEESHRQSSSSPSTKSCCDGSILACCSFPHC 114
>AY119136-1|AAM50996.1| 418|Drosophila melanogaster RE37758p
protein.
Length = 418
Score = 27.1 bits (57), Expect = 7.5
Identities = 18/59 (30%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Frame = +3
Query: 174 VAKSASGSTSRSVAILNTSHLKQLLGNRGR--HNSSTTGSGDQSNCD*TTLSCDLARHC 344
V+ S + +TS + L+ S + +LLG+ H S++ +S CD + L+C HC
Sbjct: 57 VSTSPTSATSTTKVKLSFS-VDRLLGSEPEESHRQSSSSPSTKSCCDGSILACCSFPHC 114
>AY058767-1|AAL13996.1| 1371|Drosophila melanogaster SD04244p
protein.
Length = 1371
Score = 27.1 bits (57), Expect = 7.5
Identities = 20/57 (35%), Positives = 29/57 (50%), Gaps = 6/57 (10%)
Frame = +3
Query: 144 GNGCICSFRKVAKSASGSTSRSVAILNTS-----HLKQLLGNRGRHNSSTT-GSGDQ 296
G G I S +AS S+S S ILN+ H + + G+ N +T+ GSG+Q
Sbjct: 634 GGGYIVSQPSPVAAASSSSSSSTVILNSGGAKLLHHQIITSQAGQINQATSGGSGNQ 690
>AE014297-3402|AAF56201.2| 1182|Drosophila melanogaster CG13598-PA,
isoform A protein.
Length = 1182
Score = 27.1 bits (57), Expect = 7.5
Identities = 20/57 (35%), Positives = 29/57 (50%), Gaps = 6/57 (10%)
Frame = +3
Query: 144 GNGCICSFRKVAKSASGSTSRSVAILNTS-----HLKQLLGNRGRHNSSTT-GSGDQ 296
G G I S +AS S+S S ILN+ H + + G+ N +T+ GSG+Q
Sbjct: 643 GGGYIVSQPSPVAAASSSSSSSTVILNSGGAKLLHHQIITSQAGQINQATSGGSGNQ 699
>AE014297-3401|AAO41596.1| 1362|Drosophila melanogaster CG13598-PB,
isoform B protein.
Length = 1362
Score = 27.1 bits (57), Expect = 7.5
Identities = 20/57 (35%), Positives = 29/57 (50%), Gaps = 6/57 (10%)
Frame = +3
Query: 144 GNGCICSFRKVAKSASGSTSRSVAILNTS-----HLKQLLGNRGRHNSSTT-GSGDQ 296
G G I S +AS S+S S ILN+ H + + G+ N +T+ GSG+Q
Sbjct: 643 GGGYIVSQPSPVAAASSSSSSSTVILNSGGAKLLHHQIITSQAGQINQATSGGSGNQ 699
>AE014134-1019|AAF52323.2| 418|Drosophila melanogaster CG11607-PA
protein.
Length = 418
Score = 27.1 bits (57), Expect = 7.5
Identities = 18/59 (30%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Frame = +3
Query: 174 VAKSASGSTSRSVAILNTSHLKQLLGNRGR--HNSSTTGSGDQSNCD*TTLSCDLARHC 344
V+ S + +TS + L+ S + +LLG+ H S++ +S CD + L+C HC
Sbjct: 57 VSTSPTSATSTTKVKLSFS-VDRLLGSEPEESHRQSSSSPSTKSCCDGSILACCSFPHC 114
>BT010042-1|AAQ22511.1| 2045|Drosophila melanogaster LD36052p
protein.
Length = 2045
Score = 26.6 bits (56), Expect = 10.0
Identities = 14/36 (38%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Frame = +3
Query: 189 SGSTSRSVAILNTSHLK-QLLGNRGRHNSSTTGSGD 293
+G T++S + +S LK Q G+RG N + G+GD
Sbjct: 82 AGLTTKSASSSRSSSLKKQRRGSRGSANLNVAGTGD 117
>AY089224-1|AAL89962.1| 1117|Drosophila melanogaster AT01932p protein.
Length = 1117
Score = 26.6 bits (56), Expect = 10.0
Identities = 17/58 (29%), Positives = 30/58 (51%)
Frame = +3
Query: 111 PQVRCQICVSLGNGCICSFRKVAKSASGSTSRSVAILNTSHLKQLLGNRGRHNSSTTG 284
P++R Q+ VS NG + +A+ + + VA ++ L L + G H++ST G
Sbjct: 1007 PEIR-QLRVSNSNGTKLNTATAGAAAASAAAALVAATASASLPSLNHSGGGHSASTGG 1063
>AE014298-1084|AAF46292.2| 1117|Drosophila melanogaster CG1514-PA
protein.
Length = 1117
Score = 26.6 bits (56), Expect = 10.0
Identities = 17/58 (29%), Positives = 30/58 (51%)
Frame = +3
Query: 111 PQVRCQICVSLGNGCICSFRKVAKSASGSTSRSVAILNTSHLKQLLGNRGRHNSSTTG 284
P++R Q+ VS NG + +A+ + + VA ++ L L + G H++ST G
Sbjct: 1007 PEIR-QLRVSNSNGTKLNTATAGAAAASAAAALVAATASASLPSLNHSGGGHSASTGG 1063
>AE014296-105|AAF47389.1| 2262|Drosophila melanogaster CG17046-PA,
isoform A protein.
Length = 2262
Score = 26.6 bits (56), Expect = 10.0
Identities = 14/36 (38%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Frame = +3
Query: 189 SGSTSRSVAILNTSHLK-QLLGNRGRHNSSTTGSGD 293
+G T++S + +S LK Q G+RG N + G+GD
Sbjct: 82 AGLTTKSASSSRSSSLKKQRRGSRGSANLNVAGTGD 117
>AE014296-104|ABI31227.1| 2045|Drosophila melanogaster CG17046-PB,
isoform B protein.
Length = 2045
Score = 26.6 bits (56), Expect = 10.0
Identities = 14/36 (38%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Frame = +3
Query: 189 SGSTSRSVAILNTSHLK-QLLGNRGRHNSSTTGSGD 293
+G T++S + +S LK Q G+RG N + G+GD
Sbjct: 82 AGLTTKSASSSRSSSLKKQRRGSRGSANLNVAGTGD 117
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,600,668
Number of Sequences: 53049
Number of extensions: 326375
Number of successful extensions: 1072
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 1036
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1072
length of database: 24,988,368
effective HSP length: 76
effective length of database: 20,956,644
effective search space used: 943048980
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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