Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0022_F19
(367 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U42436-10|AAF99899.1| 272|Caenorhabditis elegans Ribosomal prot... 149 6e-37
Z81053-4|CAB02879.1| 418|Caenorhabditis elegans Hypothetical pr... 30 0.58
Z78063-7|CAB01506.1| 418|Caenorhabditis elegans Hypothetical pr... 30 0.58
Z68011-3|CAA92014.2| 821|Caenorhabditis elegans Hypothetical pr... 29 1.3
Z49126-7|CAD56566.1| 392|Caenorhabditis elegans Hypothetical pr... 29 1.3
Z49126-6|CAA88942.2| 530|Caenorhabditis elegans Hypothetical pr... 29 1.3
Z49066-3|CAD56555.1| 392|Caenorhabditis elegans Hypothetical pr... 29 1.3
Z49066-2|CAD56554.1| 530|Caenorhabditis elegans Hypothetical pr... 29 1.3
Z69788-8|CAA93644.3| 483|Caenorhabditis elegans Hypothetical pr... 27 3.1
Z81083-2|CAB03101.3| 646|Caenorhabditis elegans Hypothetical pr... 27 5.4
Z78013-3|CAB01426.1| 168|Caenorhabditis elegans Hypothetical pr... 27 5.4
Z78012-8|CAB01418.2| 945|Caenorhabditis elegans Hypothetical pr... 27 5.4
Z75953-6|CAB00103.2| 945|Caenorhabditis elegans Hypothetical pr... 27 5.4
AY275181-1|AAP32289.1| 945|Caenorhabditis elegans soluble guany... 27 5.4
AC006630-3|AAK68325.1| 257|Caenorhabditis elegans Hypothetical ... 27 5.4
U41011-4|AAA82287.1| 294|Caenorhabditis elegans Hypothetical pr... 26 7.2
Z81581-6|CAB04666.1| 679|Caenorhabditis elegans Hypothetical pr... 26 9.5
AL132865-4|CAB60604.1| 458|Caenorhabditis elegans Hypothetical ... 26 9.5
AF024502-2|AAK77623.1| 591|Caenorhabditis elegans Hypothetical ... 26 9.5
>U42436-10|AAF99899.1| 272|Caenorhabditis elegans Ribosomal
protein, small subunitprotein 2 protein.
Length = 272
Score = 149 bits (361), Expect = 6e-37
Identities = 68/95 (71%), Positives = 74/95 (77%)
Frame = -3
Query: 365 NKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTG 186
NKIG PHTVPCKVTGKC SV VRLIPAPRGTGIVSAPVPKKLL MAG++DCYT+A+GST
Sbjct: 168 NKIGLPHTVPCKVTGKCASVMVRLIPAPRGTGIVSAPVPKKLLHMAGIEDCYTAAKGSTA 227
Query: 185 TLGNFXXXXXXXXXXXXXYLTPDLWRDIPLTKSPY 81
TLGNF YLTPDLW++ L KSPY
Sbjct: 228 TLGNFAKATYAALQRTYSYLTPDLWKEEALEKSPY 262
>Z81053-4|CAB02879.1| 418|Caenorhabditis elegans Hypothetical
protein E02A10.1 protein.
Length = 418
Score = 29.9 bits (64), Expect = 0.58
Identities = 14/44 (31%), Positives = 21/44 (47%)
Frame = -3
Query: 320 KCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGST 189
+C + V PRG G+ P K+ + G++D Y GST
Sbjct: 215 ECRNTRVFAQRRPRGFGLTCHPRLIKICEAIGIKDIYVKVEGST 258
>Z78063-7|CAB01506.1| 418|Caenorhabditis elegans Hypothetical
protein E02A10.1 protein.
Length = 418
Score = 29.9 bits (64), Expect = 0.58
Identities = 14/44 (31%), Positives = 21/44 (47%)
Frame = -3
Query: 320 KCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGST 189
+C + V PRG G+ P K+ + G++D Y GST
Sbjct: 215 ECRNTRVFAQRRPRGFGLTCHPRLIKICEAIGIKDIYVKVEGST 258
>Z68011-3|CAA92014.2| 821|Caenorhabditis elegans Hypothetical
protein T21B6.3 protein.
Length = 821
Score = 28.7 bits (61), Expect = 1.3
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = +2
Query: 170 QSCQECQWIHEQKCSNPEHQPFEATSWEQGQTQFQ 274
Q Q+ Q +Q+ NP+ QP + T + Q Q Q Q
Sbjct: 299 QQQQQQQQQQQQRQQNPQQQPQQTTQFGQSQIQLQ 333
>Z49126-7|CAD56566.1| 392|Caenorhabditis elegans Hypothetical
protein DH11.5b protein.
Length = 392
Score = 28.7 bits (61), Expect = 1.3
Identities = 15/50 (30%), Positives = 24/50 (48%)
Frame = +3
Query: 165 FRKVAKSASGSTSRSVAILNTSHLKQLLGNRGRHNSSTTGSGDQSNCD*T 314
F A S+S +T+ + ++ + HL L + HN TTG+ D T
Sbjct: 49 FTVTATSSSTTTTTTNSLSSNHHLPLHLHHHHHHNGMTTGTSSMGQIDGT 98
>Z49126-6|CAA88942.2| 530|Caenorhabditis elegans Hypothetical
protein DH11.5a protein.
Length = 530
Score = 28.7 bits (61), Expect = 1.3
Identities = 15/50 (30%), Positives = 24/50 (48%)
Frame = +3
Query: 165 FRKVAKSASGSTSRSVAILNTSHLKQLLGNRGRHNSSTTGSGDQSNCD*T 314
F A S+S +T+ + ++ + HL L + HN TTG+ D T
Sbjct: 49 FTVTATSSSTTTTTTNSLSSNHHLPLHLHHHHHHNGMTTGTSSMGQIDGT 98
>Z49066-3|CAD56555.1| 392|Caenorhabditis elegans Hypothetical
protein DH11.5b protein.
Length = 392
Score = 28.7 bits (61), Expect = 1.3
Identities = 15/50 (30%), Positives = 24/50 (48%)
Frame = +3
Query: 165 FRKVAKSASGSTSRSVAILNTSHLKQLLGNRGRHNSSTTGSGDQSNCD*T 314
F A S+S +T+ + ++ + HL L + HN TTG+ D T
Sbjct: 49 FTVTATSSSTTTTTTNSLSSNHHLPLHLHHHHHHNGMTTGTSSMGQIDGT 98
>Z49066-2|CAD56554.1| 530|Caenorhabditis elegans Hypothetical
protein DH11.5a protein.
Length = 530
Score = 28.7 bits (61), Expect = 1.3
Identities = 15/50 (30%), Positives = 24/50 (48%)
Frame = +3
Query: 165 FRKVAKSASGSTSRSVAILNTSHLKQLLGNRGRHNSSTTGSGDQSNCD*T 314
F A S+S +T+ + ++ + HL L + HN TTG+ D T
Sbjct: 49 FTVTATSSSTTTTTTNSLSSNHHLPLHLHHHHHHNGMTTGTSSMGQIDGT 98
>Z69788-8|CAA93644.3| 483|Caenorhabditis elegans Hypothetical
protein F09A5.1 protein.
Length = 483
Score = 27.5 bits (58), Expect = 3.1
Identities = 9/18 (50%), Positives = 14/18 (77%)
Frame = +2
Query: 98 VGYLSTSQVSNMRKSWQW 151
+GY+ +S VS++ SWQW
Sbjct: 150 LGYIISSNVSSLTGSWQW 167
>Z81083-2|CAB03101.3| 646|Caenorhabditis elegans Hypothetical
protein F44F1.3 protein.
Length = 646
Score = 26.6 bits (56), Expect = 5.4
Identities = 12/42 (28%), Positives = 19/42 (45%), Gaps = 2/42 (4%)
Frame = -2
Query: 219 GLLHFCSWIHWHSWQ--LCESYICSHCQDLRIFDT*LVERYP 100
G++ WI W + C Y+C H + + LV +YP
Sbjct: 326 GMIRGSFWISWDDFLNVFCSIYVCRHRSNWFAYYAKLVLKYP 367
>Z78013-3|CAB01426.1| 168|Caenorhabditis elegans Hypothetical
protein F15B9.8 protein.
Length = 168
Score = 26.6 bits (56), Expect = 5.4
Identities = 10/32 (31%), Positives = 14/32 (43%)
Frame = -2
Query: 258 PCSQEVASNGWCSGLLHFCSWIHWHSWQLCES 163
P S+G L F W W SW +C++
Sbjct: 80 PTQMLSGSSGRIPERLAFGEWTEWTSWSMCQN 111
>Z78012-8|CAB01418.2| 945|Caenorhabditis elegans Hypothetical
protein F57F5.2 protein.
Length = 945
Score = 26.6 bits (56), Expect = 5.4
Identities = 18/53 (33%), Positives = 25/53 (47%), Gaps = 2/53 (3%)
Frame = +3
Query: 132 CVSLGNGCICSFRKVAKSASGSTSRSVAILNT--SHLKQLLGNRGRHNSSTTG 284
CVS+G +C F K+ S V +LNT SHL ++ G + T G
Sbjct: 435 CVSIGFIRVCDFSKI--SLFIEAFEVVNLLNTIYSHLDSIVDTHGVYKVETIG 485
>Z75953-6|CAB00103.2| 945|Caenorhabditis elegans Hypothetical
protein F57F5.2 protein.
Length = 945
Score = 26.6 bits (56), Expect = 5.4
Identities = 18/53 (33%), Positives = 25/53 (47%), Gaps = 2/53 (3%)
Frame = +3
Query: 132 CVSLGNGCICSFRKVAKSASGSTSRSVAILNT--SHLKQLLGNRGRHNSSTTG 284
CVS+G +C F K+ S V +LNT SHL ++ G + T G
Sbjct: 435 CVSIGFIRVCDFSKI--SLFIEAFEVVNLLNTIYSHLDSIVDTHGVYKVETIG 485
>AY275181-1|AAP32289.1| 945|Caenorhabditis elegans soluble guanylyl
cyclase GCY-33 protein.
Length = 945
Score = 26.6 bits (56), Expect = 5.4
Identities = 18/53 (33%), Positives = 25/53 (47%), Gaps = 2/53 (3%)
Frame = +3
Query: 132 CVSLGNGCICSFRKVAKSASGSTSRSVAILNT--SHLKQLLGNRGRHNSSTTG 284
CVS+G +C F K+ S V +LNT SHL ++ G + T G
Sbjct: 435 CVSIGFIRVCDFSKI--SLFIEAFEVVNLLNTIYSHLDSIVDTHGVYKVETIG 485
>AC006630-3|AAK68325.1| 257|Caenorhabditis elegans Hypothetical
protein F14H12.3 protein.
Length = 257
Score = 26.6 bits (56), Expect = 5.4
Identities = 10/31 (32%), Positives = 13/31 (41%)
Frame = -2
Query: 261 CPCSQEVASNGWCSGLLHFCSWIHWHSWQLC 169
C C A + C+ C+W W SW C
Sbjct: 122 CQCVGAAAESQACNAQ-PCCTWTAWSSWSAC 151
>U41011-4|AAA82287.1| 294|Caenorhabditis elegans Hypothetical
protein D2024.4 protein.
Length = 294
Score = 26.2 bits (55), Expect = 7.2
Identities = 15/52 (28%), Positives = 24/52 (46%)
Frame = +3
Query: 126 QICVSLGNGCICSFRKVAKSASGSTSRSVAILNTSHLKQLLGNRGRHNSSTT 281
Q+ LG C F + ++ + + + LN LK+ L N G+ STT
Sbjct: 97 QLREMLGGKTTCKFCSLCENVKENVKENESKLNK--LKKFLSNEGKEECSTT 146
>Z81581-6|CAB04666.1| 679|Caenorhabditis elegans Hypothetical
protein T02E1.3b protein.
Length = 679
Score = 25.8 bits (54), Expect = 9.5
Identities = 9/21 (42%), Positives = 11/21 (52%)
Frame = +2
Query: 170 QSCQECQWIHEQKCSNPEHQP 232
Q +C W H+ SN EH P
Sbjct: 47 QDSSQCFWQHQNFTSNREHNP 67
>AL132865-4|CAB60604.1| 458|Caenorhabditis elegans Hypothetical
protein Y62E10A.6 protein.
Length = 458
Score = 25.8 bits (54), Expect = 9.5
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = -2
Query: 297 IDPRSPWYWNCVCPCSQEVASNGWCS 220
ID + N V CS +V + GWC+
Sbjct: 345 IDMKDHCRVNMVAACSSQVYATGWCA 370
>AF024502-2|AAK77623.1| 591|Caenorhabditis elegans Hypothetical
protein M151.4 protein.
Length = 591
Score = 25.8 bits (54), Expect = 9.5
Identities = 12/40 (30%), Positives = 19/40 (47%)
Frame = +2
Query: 149 WLHM*LSQSCQECQWIHEQKCSNPEHQPFEATSWEQGQTQ 268
W+H LS CQ ++ S +HQP ++ + TQ
Sbjct: 36 WMHA-LSAECQRLLQRSDETASTQQHQPRGSSELQASTTQ 74
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,852,938
Number of Sequences: 27780
Number of extensions: 160774
Number of successful extensions: 522
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 514
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 521
length of database: 12,740,198
effective HSP length: 73
effective length of database: 10,712,258
effective search space used: 514188384
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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