Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0022_F18
         (362 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY705394-1|AAU12503.1|  557|Anopheles gambiae nicotinic acetylch...    24   1.5  
X87410-1|CAA60857.1|  498|Anopheles gambiae maltase-like protein...    24   2.0  
AY423354-1|AAQ94040.1|  112|Anopheles gambiae defender against p...    22   6.2  
CR954257-4|CAJ14155.1|  196|Anopheles gambiae predicted protein ...    22   8.1  

>AY705394-1|AAU12503.1|  557|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 1 protein.
          Length = 557

 Score = 24.2 bits (50), Expect = 1.5
 Identities = 10/36 (27%), Positives = 16/36 (44%)
 Frame = -3

Query: 108 FTVTKRDFTWTVRLSGIFTFWFATICFILGLCLTLV 1
           F   K D+ +   +      W  TI  +LG CL ++
Sbjct: 488 FESVKEDWKYVALVLDRLFLWIFTIACVLGTCLIIL 523


>X87410-1|CAA60857.1|  498|Anopheles gambiae maltase-like protein
           Agm1 protein.
          Length = 498

 Score = 23.8 bits (49), Expect = 2.0
 Identities = 10/32 (31%), Positives = 17/32 (53%)
 Frame = -2

Query: 337 SGDTVDREMSVHCTHLVLESLGHTFDHVFDMR 242
           SG+T D +   +  H   ++L  TFD ++  R
Sbjct: 243 SGETDDPDNPTYLVHQHTQNLDETFDMMYQWR 274


>AY423354-1|AAQ94040.1|  112|Anopheles gambiae defender against
          programmed cell death protein.
          Length = 112

 Score = 22.2 bits (45), Expect = 6.2
 Identities = 7/10 (70%), Positives = 9/10 (90%)
 Frame = -3

Query: 33 CFILGLCLTL 4
          CF+LG+CL L
Sbjct: 65 CFVLGVCLRL 74


>CR954257-4|CAJ14155.1|  196|Anopheles gambiae predicted protein
           protein.
          Length = 196

 Score = 21.8 bits (44), Expect = 8.1
 Identities = 8/25 (32%), Positives = 14/25 (56%)
 Frame = +1

Query: 259 DQRCDQGIPIQDACSVRSFPYQLCH 333
           +Q  D  +   + C+V +  +QLCH
Sbjct: 131 NQCADGKVRFMNVCAVLNQEHQLCH 155


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 381,860
Number of Sequences: 2352
Number of extensions: 7567
Number of successful extensions: 13
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 563,979
effective HSP length: 57
effective length of database: 429,915
effective search space used: 27084645
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)