Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0022_F18
         (362 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY569711-1|AAS86664.1|  401|Apis mellifera feminizer protein.          26   0.12 
AY569719-1|AAS86672.1|  401|Apis mellifera feminizer protein.          23   1.1  
AY569718-1|AAS86671.1|  401|Apis mellifera feminizer protein.          23   1.1  
AY569715-1|AAS86668.1|  401|Apis mellifera feminizer protein.          23   1.1  
AY350616-1|AAQ57658.1|  401|Apis mellifera complementary sex det...    23   1.1  
AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    22   1.9  
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    22   2.6  
EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase p...    21   3.4  
AY569714-1|AAS86667.1|  401|Apis mellifera feminizer protein.          21   5.9  
AB238796-1|BAE93398.1|  128|Apis mellifera Queen brain-selective...    21   5.9  
AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cycl...    20   7.8  

>AY569711-1|AAS86664.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 26.2 bits (55), Expect = 0.12
 Identities = 22/74 (29%), Positives = 27/74 (36%)
 Frame = +1

Query: 55  EDS*ESHRPCEIAFGDSERSSRSSKTKLQTLGC*HSHG*SSPVESGEMVRF*KRTSCC*D 234
           E S    + C+  +  S  S RS     Q     HS    S  E G   R     SC  D
Sbjct: 198 EKSENETKTCK-KYAISSNSLRSRSRSFQRTSSCHSRYEDSRHEDGNSYRNDGERSCSRD 256

Query: 235 SMLSCRKHDQRCDQ 276
                +K D+R DQ
Sbjct: 257 RSREYKKKDRRYDQ 270


>AY569719-1|AAS86672.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 23.0 bits (47), Expect = 1.1
 Identities = 21/74 (28%), Positives = 26/74 (35%)
 Frame = +1

Query: 55  EDS*ESHRPCEIAFGDSERSSRSSKTKLQTLGC*HSHG*SSPVESGEMVRF*KRTSCC*D 234
           E S    + C+  +  S  S RS     Q     HS    S  E     R     SC  D
Sbjct: 198 EKSENETKTCK-KYAISSNSLRSRSRSFQRTSSCHSRYEDSRHEDRNSYRNDGERSCSRD 256

Query: 235 SMLSCRKHDQRCDQ 276
                +K D+R DQ
Sbjct: 257 RSREYKKKDRRYDQ 270


>AY569718-1|AAS86671.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 23.0 bits (47), Expect = 1.1
 Identities = 21/74 (28%), Positives = 26/74 (35%)
 Frame = +1

Query: 55  EDS*ESHRPCEIAFGDSERSSRSSKTKLQTLGC*HSHG*SSPVESGEMVRF*KRTSCC*D 234
           E S    + C+  +  S  S RS     Q     HS    S  E     R     SC  D
Sbjct: 198 EKSENETKTCK-KYAISSNSLRSRSRSFQRTSSCHSRYEDSRHEDRNSYRNDGERSCSRD 256

Query: 235 SMLSCRKHDQRCDQ 276
                +K D+R DQ
Sbjct: 257 RSREYKKKDRRYDQ 270


>AY569715-1|AAS86668.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 23.0 bits (47), Expect = 1.1
 Identities = 21/74 (28%), Positives = 26/74 (35%)
 Frame = +1

Query: 55  EDS*ESHRPCEIAFGDSERSSRSSKTKLQTLGC*HSHG*SSPVESGEMVRF*KRTSCC*D 234
           E S    + C+  +  S  S RS     Q     HS    S  E     R     SC  D
Sbjct: 198 EKSENETKTCK-KYAISSNSLRSRSRSFQRTSSCHSRYEDSRHEDRNSYRNDGERSCSRD 256

Query: 235 SMLSCRKHDQRCDQ 276
                +K D+R DQ
Sbjct: 257 RSREYKKKDRRYDQ 270


>AY350616-1|AAQ57658.1|  401|Apis mellifera complementary sex
           determiner protein.
          Length = 401

 Score = 23.0 bits (47), Expect = 1.1
 Identities = 21/74 (28%), Positives = 26/74 (35%)
 Frame = +1

Query: 55  EDS*ESHRPCEIAFGDSERSSRSSKTKLQTLGC*HSHG*SSPVESGEMVRF*KRTSCC*D 234
           E S    + C+  +  S  S RS     Q     HS    S  E     R     SC  D
Sbjct: 198 EKSENETKTCK-KYAISSNSLRSRSRSFQRTSSCHSRYEDSRHEDRNSYRNDGERSCSRD 256

Query: 235 SMLSCRKHDQRCDQ 276
                +K D+R DQ
Sbjct: 257 RSREYKKKDRRYDQ 270


>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 22.2 bits (45), Expect = 1.9
 Identities = 14/43 (32%), Positives = 19/43 (44%), Gaps = 1/43 (2%)
 Frame = -3

Query: 240 HTVLTAASSFLEPNHFSTF-NWRGLTMRMSTAKCLKFRFRTPR 115
           + V +A  SF  P     F  WR     +ST K +   FRT +
Sbjct: 247 YVVYSALGSFYIPMLVMLFFYWRIYNAAVSTTKAINQGFRTTK 289


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 21.8 bits (44), Expect = 2.6
 Identities = 7/19 (36%), Positives = 10/19 (52%)
 Frame = +2

Query: 257 MIKGVTKGFQYKMRAVYAH 313
           M++G+  G QY     Y H
Sbjct: 740 MLRGIASGMQYLAEMNYVH 758


>EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase
           protein.
          Length = 620

 Score = 21.4 bits (43), Expect = 3.4
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = +2

Query: 230 RTVCSHVENMIKGV 271
           R VC  +EN I+G+
Sbjct: 477 RAVCGRIENTIQGL 490


>AY569714-1|AAS86667.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 20.6 bits (41), Expect = 5.9
 Identities = 22/75 (29%), Positives = 29/75 (38%), Gaps = 1/75 (1%)
 Frame = +1

Query: 55  EDS*ESHRPCE-IAFGDSERSSRSSKTKLQTLGC*HSHG*SSPVESGEMVRF*KRTSCC* 231
           E S    + C+  A   +   SRS   + +T  C HS    S  E     R     SC  
Sbjct: 198 EKSENETKTCKKYAISSNSLGSRSRSFQ-RTSSC-HSRYEDSRHEDRNSYRNDGERSCSR 255

Query: 232 DSMLSCRKHDQRCDQ 276
           D     +K D+R DQ
Sbjct: 256 DRSREYKKKDRRYDQ 270


>AB238796-1|BAE93398.1|  128|Apis mellifera Queen brain-selective
           protein-1 protein.
          Length = 128

 Score = 20.6 bits (41), Expect = 5.9
 Identities = 7/22 (31%), Positives = 10/22 (45%)
 Frame = +1

Query: 241 LSCRKHDQRCDQGIPIQDACSV 306
           L C     +C  GI +  AC +
Sbjct: 37  LGCGDSCHKCKYGIAMSSACGI 58


>AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cyclase
           alpha 1 subunit protein.
          Length = 699

 Score = 20.2 bits (40), Expect = 7.8
 Identities = 7/17 (41%), Positives = 10/17 (58%)
 Frame = -2

Query: 238 YCPNSS*FFFRTEPFLH 188
           +CP S    F + PFL+
Sbjct: 382 HCPESDSILFVSSPFLN 398


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 98,037
Number of Sequences: 438
Number of extensions: 2107
Number of successful extensions: 11
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used:  8556345
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)