Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0022_F17
         (186 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory recept...    20   2.0  
AM292352-1|CAL23164.1|  250|Tribolium castaneum gustatory recept...    19   4.6  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    19   6.1  
DQ138190-1|ABA03054.1|  135|Tribolium castaneum bursicon-like pr...    18   8.1  
AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain tran...    18   8.1  
AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein p...    18   8.1  
AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein p...    18   8.1  

>AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory receptor
           candidate 1 protein.
          Length = 373

 Score = 20.2 bits (40), Expect = 2.0
 Identities = 8/33 (24%), Positives = 17/33 (51%)
 Frame = -3

Query: 184 ITFNINYQNHTVLIRLTYYVKRIL*QGDILFTH 86
           ++  INY+N     R+  +V+ +     +LF +
Sbjct: 119 VSLIINYENQRTRSRIHLFVRYVFVTSYLLFDY 151


>AM292352-1|CAL23164.1|  250|Tribolium castaneum gustatory receptor
           candidate 31 protein.
          Length = 250

 Score = 19.0 bits (37), Expect = 4.6
 Identities = 11/43 (25%), Positives = 19/43 (44%)
 Frame = -1

Query: 162 KTTQFSYALHIM*NVYYDKETFYSLTLQPFFRRFTRSSNSIDF 34
           K  QF    H++   Y     F S + +   R+F +++ S  F
Sbjct: 36  KQLQFFAVEHLLIQCYIAVSIFGSSSFEADLRQFYKTAYSAIF 78


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 18.6 bits (36), Expect = 6.1
 Identities = 9/38 (23%), Positives = 16/38 (42%)
 Frame = -1

Query: 183 LHLILITKTTQFSYALHIM*NVYYDKETFYSLTLQPFF 70
           +HL+ +     F+  L  +  +YY    F   T+   F
Sbjct: 191 MHLLFLLCLDYFTLHLLFLPCIYYFYSAFIIFTIHLLF 228



 Score = 18.6 bits (36), Expect = 6.1
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = -1

Query: 123 NVYYDKETFYSLTLQPFFRR 64
           ++Y  K TFY   ++PF  R
Sbjct: 317 SLYPLKSTFYLNVVRPFPER 336


>DQ138190-1|ABA03054.1|  135|Tribolium castaneum bursicon-like
           protein protein.
          Length = 135

 Score = 18.2 bits (35), Expect = 8.1
 Identities = 7/16 (43%), Positives = 8/16 (50%)
 Frame = +2

Query: 128 IICKAYENCVVLVINI 175
           I+C  Y  CV  V  I
Sbjct: 6   ILCLVYATCVYSVSEI 21


>AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain
           transcription factor Labialprotein.
          Length = 353

 Score = 18.2 bits (35), Expect = 8.1
 Identities = 6/10 (60%), Positives = 9/10 (90%)
 Frame = -2

Query: 107 RRHFIHSLSS 78
           R+H +H+LSS
Sbjct: 177 RQHVMHNLSS 186


>AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein
           protein.
          Length = 210

 Score = 18.2 bits (35), Expect = 8.1
 Identities = 6/10 (60%), Positives = 9/10 (90%)
 Frame = -2

Query: 107 RRHFIHSLSS 78
           R+H +H+LSS
Sbjct: 177 RQHVMHNLSS 186


>AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein
           protein.
          Length = 253

 Score = 18.2 bits (35), Expect = 8.1
 Identities = 6/10 (60%), Positives = 9/10 (90%)
 Frame = -2

Query: 107 RRHFIHSLSS 78
           R+H +H+LSS
Sbjct: 177 RQHVMHNLSS 186


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 38,863
Number of Sequences: 336
Number of extensions: 638
Number of successful extensions: 13
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 41
effective length of database: 108,809
effective search space used:  2176180
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 34 (18.5 bits)