Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0022_F17
         (186 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL512643-1|CAH71824.1|  702|Homo sapiens chromosome 9 open readi...    29   2.0  
AL354672-1|CAI14375.1|  702|Homo sapiens chromosome 9 open readi...    29   2.0  
AB160987-1|BAD89015.1| 2179|Homo sapiens extracellular matrix pr...    29   2.0  
AF009632-1|AAC51887.1|  631|Homo sapiens immunoglobulin-like tra...    28   6.1  

>AL512643-1|CAH71824.1|  702|Homo sapiens chromosome 9 open reading
           frame 145 protein.
          Length = 702

 Score = 29.5 bits (63), Expect = 2.0
 Identities = 14/38 (36%), Positives = 22/38 (57%), Gaps = 4/38 (10%)
 Frame = -1

Query: 171 LITKTTQFSYA----LHIM*NVYYDKETFYSLTLQPFF 70
           L+ K T+ +Y     LH + +  YD+E  Y++T  PFF
Sbjct: 651 LVVKETEVAYITKKQLHFIDSESYDRELVYTITTPPFF 688


>AL354672-1|CAI14375.1|  702|Homo sapiens chromosome 9 open reading
           frame 145 protein.
          Length = 702

 Score = 29.5 bits (63), Expect = 2.0
 Identities = 14/38 (36%), Positives = 22/38 (57%), Gaps = 4/38 (10%)
 Frame = -1

Query: 171 LITKTTQFSYA----LHIM*NVYYDKETFYSLTLQPFF 70
           L+ K T+ +Y     LH + +  YD+E  Y++T  PFF
Sbjct: 651 LVVKETEVAYITKKQLHFIDSESYDRELVYTITTPPFF 688


>AB160987-1|BAD89015.1| 2179|Homo sapiens extracellular matrix
           protein QBRICK protein.
          Length = 2179

 Score = 29.5 bits (63), Expect = 2.0
 Identities = 14/38 (36%), Positives = 22/38 (57%), Gaps = 4/38 (10%)
 Frame = -1

Query: 171 LITKTTQFSYA----LHIM*NVYYDKETFYSLTLQPFF 70
           L+ K T+ +Y     LH + +  YD+E  Y++T  PFF
Sbjct: 651 LVVKETEVAYITKKQLHFIDSESYDRELVYTITTPPFF 688


>AF009632-1|AAC51887.1|  631|Homo sapiens immunoglobulin-like
           transcript 5 protein protein.
          Length = 631

 Score = 27.9 bits (59), Expect = 6.1
 Identities = 11/25 (44%), Positives = 13/25 (52%)
 Frame = +3

Query: 90  VNKMSPCHNIRFT*YVRRMRTVWFW 164
           V  ++P H  RFT Y   M T W W
Sbjct: 183 VGPVNPSHRWRFTCYYYYMNTPWVW 207


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,847,935
Number of Sequences: 237096
Number of extensions: 285001
Number of successful extensions: 596
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 562
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 596
length of database: 76,859,062
effective HSP length: 41
effective length of database: 67,138,126
effective search space used: 1342762520
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)