Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0022_F16
         (192 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory recept...    20   2.0  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    20   2.0  
EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine hydroxy...    19   4.6  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    19   6.1  

>AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory receptor
           candidate 52 protein.
          Length = 360

 Score = 20.2 bits (40), Expect = 2.0
 Identities = 9/23 (39%), Positives = 15/23 (65%)
 Frame = +1

Query: 82  LVTRLNLTIYFSVCKLLRYLLRF 150
           +V ++ L  Y ++ K LR+ LRF
Sbjct: 167 VVVKMLLVRYRNLTKQLRFKLRF 189


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 20.2 bits (40), Expect = 2.0
 Identities = 9/23 (39%), Positives = 15/23 (65%)
 Frame = +1

Query: 82  LVTRLNLTIYFSVCKLLRYLLRF 150
           +V ++ L  Y ++ K LR+ LRF
Sbjct: 167 VVVKMLLVRYRNLTKQLRFKLRF 189


>EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine
           hydroxylase protein.
          Length = 532

 Score = 19.0 bits (37), Expect = 4.6
 Identities = 5/22 (22%), Positives = 12/22 (54%)
 Frame = -1

Query: 66  MFESASFISNSSEAYNLKFPSC 1
           +F+S  ++ + +  Y+   P C
Sbjct: 337 IFQSTQYVRHKNTPYHTPEPDC 358


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
           adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 18.6 bits (36), Expect = 6.1
 Identities = 5/18 (27%), Positives = 11/18 (61%)
 Frame = -2

Query: 74  LYVCLKARLLSAIHLKHI 21
           +YVCL    + ++H + +
Sbjct: 98  VYVCLAKNSVGSVHSRDV 115


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 39,444
Number of Sequences: 336
Number of extensions: 586
Number of successful extensions: 7
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 43
effective length of database: 108,137
effective search space used:  2162740
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 34 (18.5 bits)