Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0022_F14
         (211 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ026039-1|AAY87898.1|  427|Apis mellifera nicotinic acetylcholi...    22   0.91 
S78458-1|AAB34402.1|   46|Apis mellifera apamin protein.               20   2.8  
DQ435327-1|ABD92642.1|  145|Apis mellifera OBP10 protein.              19   4.9  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             19   8.5  

>DQ026039-1|AAY87898.1|  427|Apis mellifera nicotinic acetylcholine
           receptor beta2subunit protein.
          Length = 427

 Score = 21.8 bits (44), Expect = 0.91
 Identities = 8/23 (34%), Positives = 14/23 (60%)
 Frame = -3

Query: 128 CYFLHLFFQPYVFLSCSIYYGIW 60
           C + H ++ PY  L+C+I+   W
Sbjct: 159 CEYDHTWW-PYDILNCTIHIASW 180


>S78458-1|AAB34402.1|   46|Apis mellifera apamin protein.
          Length = 46

 Score = 20.2 bits (40), Expect = 2.8
 Identities = 8/23 (34%), Positives = 10/23 (43%)
 Frame = -1

Query: 118 CIYFFSHMFF*AVQFITEYGTCN 50
           CIY F  +      F+T    CN
Sbjct: 7   CIYLFLSVILITSYFVTPVMPCN 29


>DQ435327-1|ABD92642.1|  145|Apis mellifera OBP10 protein.
          Length = 145

 Score = 19.4 bits (38), Expect = 4.9
 Identities = 8/22 (36%), Positives = 12/22 (54%)
 Frame = -3

Query: 134 NNCYFLHLFFQPYVFLSCSIYY 69
           +NC + + F + Y  LS   YY
Sbjct: 122 DNCEYAYRFNKCYAELSPRTYY 143


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 18.6 bits (36), Expect = 8.5
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = -2

Query: 87 ELFNLLRNMVRVTGLQ 40
          EL    +NMV V GL+
Sbjct: 19 ELLRWTKNMVFVVGLE 34


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 48,260
Number of Sequences: 438
Number of extensions: 794
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 45
effective length of database: 126,633
effective search space used:  3039192
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 36 (19.4 bits)