Samia BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0022_F13
         (195 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q2F608 Cluster: DnaJ-like protein isoform A; n=4; Endop...    40   0.011

>UniRef50_Q2F608 Cluster: DnaJ-like protein isoform A; n=4;
           Endopterygota|Rep: DnaJ-like protein isoform A - Bombyx
           mori (Silk moth)
          Length = 515

 Score = 39.9 bits (89), Expect = 0.011
 Identities = 16/17 (94%), Positives = 17/17 (100%)
 Frame = +2

Query: 143 GNHLYKFKNYKGALAMY 193
           GN+LYKFKNYKGALAMY
Sbjct: 53  GNYLYKFKNYKGALAMY 69


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 98,314,413
Number of Sequences: 1657284
Number of extensions: 611157
Number of successful extensions: 1048
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 1046
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1048
length of database: 575,637,011
effective HSP length: 44
effective length of database: 502,716,515
effective search space used: 10054330300
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)