Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0022_F10
(330 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z48585-7|CAA88482.1| 160|Caenorhabditis elegans Hypothetical pr... 44 2e-05
AB079299-1|BAB84566.1| 160|Caenorhabditis elegans troponin C pr... 44 2e-05
AJ132193-1|CAA10601.1| 149|Caenorhabditis elegans calmodulin pr... 37 0.003
AF016429-2|AAB65364.1| 149|Caenorhabditis elegans Calmodulin pr... 37 0.003
Z82282-1|CAB05271.1| 182|Caenorhabditis elegans Hypothetical pr... 37 0.004
M23366-1|AAA28114.1| 170|Caenorhabditis elegans myosin light ch... 36 0.005
M23365-1|AAA28113.1| 170|Caenorhabditis elegans myosin light ch... 36 0.005
AC024089-6|AAK09070.2| 170|Caenorhabditis elegans Myosin light ... 36 0.005
AC024089-5|AAK09069.1| 170|Caenorhabditis elegans Myosin light ... 36 0.005
U88165-10|AAK21395.1| 161|Caenorhabditis elegans Paralysed arre... 35 0.012
D45896-1|BAA82524.1| 161|Caenorhabditis elegans troponin C prot... 35 0.012
D45895-1|BAA82523.1| 161|Caenorhabditis elegans troponin C prot... 35 0.012
U70851-8|AAB09131.1| 164|Caenorhabditis elegans Calmodulin rela... 35 0.016
Z70034-1|CAA93852.2| 171|Caenorhabditis elegans Hypothetical pr... 34 0.021
Z46793-3|CAA86772.1| 172|Caenorhabditis elegans Hypothetical pr... 34 0.021
Z34801-8|CAA84331.1| 172|Caenorhabditis elegans Hypothetical pr... 34 0.021
AJ512489-1|CAD54672.1| 171|Caenorhabditis elegans calmodulin-li... 34 0.021
AC084159-17|AAK39364.1| 116|Caenorhabditis elegans Hypothetical... 34 0.028
Z81053-2|CAB02878.2| 202|Caenorhabditis elegans Hypothetical pr... 31 0.15
Z77653-1|CAB01124.1| 218|Caenorhabditis elegans Hypothetical pr... 31 0.20
X04259-1|CAA27814.1| 161|Caenorhabditis elegans cal-1 protein. 31 0.20
AF016435-6|AAB65882.1| 213|Caenorhabditis elegans Hypothetical ... 30 0.34
Z70683-2|CAA94592.2| 717|Caenorhabditis elegans Hypothetical pr... 29 1.0
U80453-3|AAV58885.1| 434|Caenorhabditis elegans Serine palmitoy... 29 1.0
U80453-2|AAK31446.1| 458|Caenorhabditis elegans Serine palmitoy... 29 1.0
U42848-7|AAA83612.2| 567|Caenorhabditis elegans Hypothetical pr... 29 1.0
U40423-5|AAA81454.2| 156|Caenorhabditis elegans Unidentified vi... 28 1.4
Z70267-5|CAA94209.2| 143|Caenorhabditis elegans Hypothetical pr... 28 1.8
AL110485-23|CAB60377.3| 770|Caenorhabditis elegans Hypothetical... 27 2.4
U41625-3|AAA83326.1| 264|Caenorhabditis elegans Hypothetical pr... 27 3.2
Z82095-2|CAB05027.2| 602|Caenorhabditis elegans Hypothetical pr... 27 4.2
Z70783-6|CAA94856.1| 195|Caenorhabditis elegans Hypothetical pr... 27 4.2
U80815-2|AAB37995.1| 1372|Caenorhabditis elegans Hypothetical pr... 27 4.2
Z83221-9|CAB05710.1| 400|Caenorhabditis elegans Hypothetical pr... 26 5.5
Z82095-8|CAB05029.1| 400|Caenorhabditis elegans Hypothetical pr... 26 5.5
Z82095-3|CAB05028.1| 411|Caenorhabditis elegans Hypothetical pr... 26 5.5
Z73422-3|CAA97766.1| 523|Caenorhabditis elegans Hypothetical pr... 26 5.5
Z73422-2|CAA97765.1| 450|Caenorhabditis elegans Hypothetical pr... 26 5.5
Z66561-4|CAA91457.2| 185|Caenorhabditis elegans Hypothetical pr... 26 7.3
U37429-9|AAA79344.3| 796|Caenorhabditis elegans Hypothetical pr... 25 9.7
U00041-1|AAA50671.3| 2248|Caenorhabditis elegans Abnormal cell l... 25 9.7
L16621-8|AAA28228.1| 632|Caenorhabditis elegans Hypothetical pr... 25 9.7
AF245435-1|AAF87497.1| 2248|Caenorhabditis elegans zinc finger p... 25 9.7
>Z48585-7|CAA88482.1| 160|Caenorhabditis elegans Hypothetical
protein ZK673.7 protein.
Length = 160
Score = 44.4 bits (100), Expect = 2e-05
Identities = 20/47 (42%), Positives = 28/47 (59%)
Frame = -3
Query: 160 KMAMLRKAFQMFDTTKSGYIDVLKISTILNTMGQLFDDSELQALIDE 20
++ RK F MFD GYI ++ IL TMGQ F++ +L+ LI E
Sbjct: 16 QIEQFRKYFNMFDKEGKGYIRATQVGQILRTMGQAFEERDLKQLIKE 62
>AB079299-1|BAB84566.1| 160|Caenorhabditis elegans troponin C
protein.
Length = 160
Score = 44.4 bits (100), Expect = 2e-05
Identities = 20/47 (42%), Positives = 28/47 (59%)
Frame = -3
Query: 160 KMAMLRKAFQMFDTTKSGYIDVLKISTILNTMGQLFDDSELQALIDE 20
++ RK F MFD GYI ++ IL TMGQ F++ +L+ LI E
Sbjct: 16 QIEQFRKYFNMFDKEGKGYIRATQVGQILRTMGQAFEERDLKQLIKE 62
>AJ132193-1|CAA10601.1| 149|Caenorhabditis elegans calmodulin
protein.
Length = 149
Score = 37.1 bits (82), Expect = 0.003
Identities = 15/49 (30%), Positives = 32/49 (65%)
Frame = -3
Query: 166 DQKMAMLRKAFQMFDTTKSGYIDVLKISTILNTMGQLFDDSELQALIDE 20
++++A ++AF +FD G I ++ T++ ++GQ ++ELQ +I+E
Sbjct: 7 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINE 55
Score = 36.3 bits (80), Expect = 0.005
Identities = 15/53 (28%), Positives = 32/53 (60%)
Frame = -3
Query: 178 DTDDDQKMAMLRKAFQMFDTTKSGYIDVLKISTILNTMGQLFDDSELQALIDE 20
DTD +++ +R+AF++FD +G+I ++ ++ +G+ D E+ +I E
Sbjct: 79 DTDSEEE---IREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIRE 128
>AF016429-2|AAB65364.1| 149|Caenorhabditis elegans Calmodulin
protein 1 protein.
Length = 149
Score = 37.1 bits (82), Expect = 0.003
Identities = 15/49 (30%), Positives = 32/49 (65%)
Frame = -3
Query: 166 DQKMAMLRKAFQMFDTTKSGYIDVLKISTILNTMGQLFDDSELQALIDE 20
++++A ++AF +FD G I ++ T++ ++GQ ++ELQ +I+E
Sbjct: 7 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINE 55
Score = 36.3 bits (80), Expect = 0.005
Identities = 15/53 (28%), Positives = 32/53 (60%)
Frame = -3
Query: 178 DTDDDQKMAMLRKAFQMFDTTKSGYIDVLKISTILNTMGQLFDDSELQALIDE 20
DTD +++ +R+AF++FD +G+I ++ ++ +G+ D E+ +I E
Sbjct: 79 DTDSEEE---IREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIRE 128
>Z82282-1|CAB05271.1| 182|Caenorhabditis elegans Hypothetical
protein T07G12.1 protein.
Length = 182
Score = 36.7 bits (81), Expect = 0.004
Identities = 15/44 (34%), Positives = 26/44 (59%)
Frame = -3
Query: 151 MLRKAFQMFDTTKSGYIDVLKISTILNTMGQLFDDSELQALIDE 20
++R AF++FD +GYI + + TMG+ F + E+ +I E
Sbjct: 96 LIRLAFKVFDKDGNGYITAQEFKHFMTTMGERFSEEEVDEIIRE 139
>M23366-1|AAA28114.1| 170|Caenorhabditis elegans myosin light chain
2 protein.
Length = 170
Score = 36.3 bits (80), Expect = 0.005
Identities = 16/50 (32%), Positives = 28/50 (56%)
Frame = -3
Query: 169 DDQKMAMLRKAFQMFDTTKSGYIDVLKISTILNTMGQLFDDSELQALIDE 20
D + + ++AF + D K G ID + + +MGQ+ DS++ A+I E
Sbjct: 22 DQKTIQEFKEAFGIMDQNKDGIIDKSDLKDLYASMGQIAPDSQIDAMIKE 71
>M23365-1|AAA28113.1| 170|Caenorhabditis elegans myosin light chain
1 protein.
Length = 170
Score = 36.3 bits (80), Expect = 0.005
Identities = 16/50 (32%), Positives = 28/50 (56%)
Frame = -3
Query: 169 DDQKMAMLRKAFQMFDTTKSGYIDVLKISTILNTMGQLFDDSELQALIDE 20
D + + ++AF + D K G ID + + +MGQ+ DS++ A+I E
Sbjct: 22 DQKTIQEFKEAFGIMDQNKDGIIDKSDLKDLYASMGQIAPDSQIDAMIKE 71
>AC024089-6|AAK09070.2| 170|Caenorhabditis elegans Myosin light
chain protein 1 protein.
Length = 170
Score = 36.3 bits (80), Expect = 0.005
Identities = 16/50 (32%), Positives = 28/50 (56%)
Frame = -3
Query: 169 DDQKMAMLRKAFQMFDTTKSGYIDVLKISTILNTMGQLFDDSELQALIDE 20
D + + ++AF + D K G ID + + +MGQ+ DS++ A+I E
Sbjct: 22 DQKTIQEFKEAFGIMDQNKDGIIDKSDLKDLYASMGQIAPDSQIDAMIKE 71
>AC024089-5|AAK09069.1| 170|Caenorhabditis elegans Myosin light
chain protein 2 protein.
Length = 170
Score = 36.3 bits (80), Expect = 0.005
Identities = 16/50 (32%), Positives = 28/50 (56%)
Frame = -3
Query: 169 DDQKMAMLRKAFQMFDTTKSGYIDVLKISTILNTMGQLFDDSELQALIDE 20
D + + ++AF + D K G ID + + +MGQ+ DS++ A+I E
Sbjct: 22 DQKTIQEFKEAFGIMDQNKDGIIDKSDLKDLYASMGQIAPDSQIDAMIKE 71
>U88165-10|AAK21395.1| 161|Caenorhabditis elegans Paralysed arrest
at two-fold protein10 protein.
Length = 161
Score = 35.1 bits (77), Expect = 0.012
Identities = 18/48 (37%), Positives = 26/48 (54%)
Frame = -3
Query: 169 DDQKMAMLRKAFQMFDTTKSGYIDVLKISTILNTMGQLFDDSELQALI 26
D ++ +K F FD K GYI +I I++ M Q FD+ L+ LI
Sbjct: 13 DGSQIEEYQKFFDAFDRGKQGYIMATQIGQIMHGMEQDFDEKTLRKLI 60
Score = 32.7 bits (71), Expect = 0.064
Identities = 14/43 (32%), Positives = 24/43 (55%)
Frame = -3
Query: 148 LRKAFQMFDTTKSGYIDVLKISTILNTMGQLFDDSELQALIDE 20
LR+AF++FD +GYI + +L + D +L+ +DE
Sbjct: 96 LREAFRLFDKEGNGYISRPTLKALLKEIADDLTDQQLEEAVDE 138
>D45896-1|BAA82524.1| 161|Caenorhabditis elegans troponin C
protein.
Length = 161
Score = 35.1 bits (77), Expect = 0.012
Identities = 18/48 (37%), Positives = 26/48 (54%)
Frame = -3
Query: 169 DDQKMAMLRKAFQMFDTTKSGYIDVLKISTILNTMGQLFDDSELQALI 26
D ++ +K F FD K GYI +I I++ M Q FD+ L+ LI
Sbjct: 13 DGSQIEEYQKFFDAFDRGKQGYIMATQIGQIMHGMEQDFDEKTLRKLI 60
Score = 32.7 bits (71), Expect = 0.064
Identities = 14/43 (32%), Positives = 24/43 (55%)
Frame = -3
Query: 148 LRKAFQMFDTTKSGYIDVLKISTILNTMGQLFDDSELQALIDE 20
LR+AF++FD +GYI + +L + D +L+ +DE
Sbjct: 96 LREAFRLFDKEGNGYISRPTLKALLKEIADDLTDQQLEEAVDE 138
>D45895-1|BAA82523.1| 161|Caenorhabditis elegans troponin C
protein.
Length = 161
Score = 35.1 bits (77), Expect = 0.012
Identities = 18/48 (37%), Positives = 26/48 (54%)
Frame = -3
Query: 169 DDQKMAMLRKAFQMFDTTKSGYIDVLKISTILNTMGQLFDDSELQALI 26
D ++ +K F FD K GYI +I I++ M Q FD+ L+ LI
Sbjct: 13 DGSQIEEYQKFFDAFDRGKQGYIMATQIGQIMHGMEQDFDEKTLRKLI 60
Score = 32.7 bits (71), Expect = 0.064
Identities = 14/43 (32%), Positives = 24/43 (55%)
Frame = -3
Query: 148 LRKAFQMFDTTKSGYIDVLKISTILNTMGQLFDDSELQALIDE 20
LR+AF++FD +GYI + +L + D +L+ +DE
Sbjct: 96 LREAFRLFDKEGNGYISRPTLKALLKEIADDLTDQQLEEAVDE 138
>U70851-8|AAB09131.1| 164|Caenorhabditis elegans Calmodulin related
genes protein 3 protein.
Length = 164
Score = 34.7 bits (76), Expect = 0.016
Identities = 14/44 (31%), Positives = 27/44 (61%)
Frame = -3
Query: 151 MLRKAFQMFDTTKSGYIDVLKISTILNTMGQLFDDSELQALIDE 20
M+R+AF++FD +G I + + MG FD+ E++ +++E
Sbjct: 102 MIREAFKIFDRDGNGVITANEFKLFMINMGMCFDEVEVEEMMNE 145
Score = 25.8 bits (54), Expect = 7.3
Identities = 9/49 (18%), Positives = 27/49 (55%)
Frame = -3
Query: 166 DQKMAMLRKAFQMFDTTKSGYIDVLKISTILNTMGQLFDDSELQALIDE 20
++++ ++AF +FD +G I + ++ + +GQ + ++ +I +
Sbjct: 25 EEEIHEFKEAFLLFDKDGNGTISIKELGVAMRALGQNPTEQQMMEIIHD 73
>Z70034-1|CAA93852.2| 171|Caenorhabditis elegans Hypothetical
protein C18E9.1 protein.
Length = 171
Score = 34.3 bits (75), Expect = 0.021
Identities = 15/44 (34%), Positives = 25/44 (56%)
Frame = -3
Query: 151 MLRKAFQMFDTTKSGYIDVLKISTILNTMGQLFDDSELQALIDE 20
M+R+AF++FD +G+I + + MG F D E+ +I E
Sbjct: 108 MIREAFRVFDRDGNGFITADEFRYFMTHMGDQFSDQEVDEIIAE 151
Score = 29.5 bits (63), Expect = 0.60
Identities = 17/75 (22%), Positives = 40/75 (53%)
Frame = -3
Query: 244 RRTPLYNPFHAPVVAKRISVT*DTDDDQKMAMLRKAFQMFDTTKSGYIDVLKISTILNTM 65
RR L+N + + + +S D +++++ + AF++FD +G I ++ + ++
Sbjct: 6 RRVSLFNRWASKQTNEPVSGF-DGLNEEEIMEYKAAFRLFDKDGNGSISSKELGVAMRSL 64
Query: 64 GQLFDDSELQALIDE 20
GQ + EL +++E
Sbjct: 65 GQNPTEQELLDMVNE 79
>Z46793-3|CAA86772.1| 172|Caenorhabditis elegans Hypothetical
protein C56G7.1 protein.
Length = 172
Score = 34.3 bits (75), Expect = 0.021
Identities = 14/46 (30%), Positives = 26/46 (56%)
Frame = -3
Query: 151 MLRKAFQMFDTTKSGYIDVLKISTILNTMGQLFDDSELQALIDENP 14
++R AFQ FD SG ++ + +L TMG+ + + ++ L + P
Sbjct: 102 VIRNAFQCFDEDNSGKLNEEHLRELLTTMGERYSEEQVDELFRDAP 147
>Z34801-8|CAA84331.1| 172|Caenorhabditis elegans Hypothetical
protein C56G7.1 protein.
Length = 172
Score = 34.3 bits (75), Expect = 0.021
Identities = 14/46 (30%), Positives = 26/46 (56%)
Frame = -3
Query: 151 MLRKAFQMFDTTKSGYIDVLKISTILNTMGQLFDDSELQALIDENP 14
++R AFQ FD SG ++ + +L TMG+ + + ++ L + P
Sbjct: 102 VIRNAFQCFDEDNSGKLNEEHLRELLTTMGERYSEEQVDELFRDAP 147
>AJ512489-1|CAD54672.1| 171|Caenorhabditis elegans calmodulin-like
protein protein.
Length = 171
Score = 34.3 bits (75), Expect = 0.021
Identities = 15/44 (34%), Positives = 25/44 (56%)
Frame = -3
Query: 151 MLRKAFQMFDTTKSGYIDVLKISTILNTMGQLFDDSELQALIDE 20
M+R+AF++FD +G+I + + MG F D E+ +I E
Sbjct: 108 MIREAFRVFDRDGNGFITADEFRYFMTHMGDQFSDQEVDEIIAE 151
Score = 29.5 bits (63), Expect = 0.60
Identities = 17/75 (22%), Positives = 40/75 (53%)
Frame = -3
Query: 244 RRTPLYNPFHAPVVAKRISVT*DTDDDQKMAMLRKAFQMFDTTKSGYIDVLKISTILNTM 65
RR L+N + + + +S D +++++ + AF++FD +G I ++ + ++
Sbjct: 6 RRVSLFNRWASKQTNEPVSGF-DGLNEEEIMEYKAAFRLFDKDGNGSISSKELGVAMRSL 64
Query: 64 GQLFDDSELQALIDE 20
GQ + EL +++E
Sbjct: 65 GQNPTEQELLDMVNE 79
>AC084159-17|AAK39364.1| 116|Caenorhabditis elegans Hypothetical
protein Y73B3A.12 protein.
Length = 116
Score = 33.9 bits (74), Expect = 0.028
Identities = 14/52 (26%), Positives = 31/52 (59%)
Frame = -3
Query: 175 TDDDQKMAMLRKAFQMFDTTKSGYIDVLKISTILNTMGQLFDDSELQALIDE 20
TD +++ +R+AF++FD +G+I ++ ++ +G+ D E+ +I E
Sbjct: 29 TDSEEE---IREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIRE 77
>Z81053-2|CAB02878.2| 202|Caenorhabditis elegans Hypothetical
protein E02A10.3 protein.
Length = 202
Score = 31.5 bits (68), Expect = 0.15
Identities = 14/49 (28%), Positives = 26/49 (53%)
Frame = -3
Query: 166 DQKMAMLRKAFQMFDTTKSGYIDVLKISTILNTMGQLFDDSELQALIDE 20
++++ R+ F MFD +SG I + ++ + +G EL +IDE
Sbjct: 52 EEELQEYRQVFNMFDADRSGAIAIDELEAAIKNLGLEQTRDELDKIIDE 100
>Z77653-1|CAB01124.1| 218|Caenorhabditis elegans Hypothetical
protein C13C12.1 protein.
Length = 218
Score = 31.1 bits (67), Expect = 0.20
Identities = 14/44 (31%), Positives = 24/44 (54%)
Frame = -3
Query: 151 MLRKAFQMFDTTKSGYIDVLKISTILNTMGQLFDDSELQALIDE 20
M+R+AF++FD +G I + + MG F + E+ +I E
Sbjct: 154 MIREAFRVFDKDGNGVITAQEFRYFMVHMGMQFSEEEVDEMIKE 197
Score = 29.5 bits (63), Expect = 0.60
Identities = 13/42 (30%), Positives = 24/42 (57%)
Frame = -3
Query: 145 RKAFQMFDTTKSGYIDVLKISTILNTMGQLFDDSELQALIDE 20
R+AF MFD +G I ++ + ++GQ + E+ +I+E
Sbjct: 84 REAFMMFDKDGNGTISTKELGIAMRSLGQNPTEQEILEMINE 125
>X04259-1|CAA27814.1| 161|Caenorhabditis elegans cal-1 protein.
Length = 161
Score = 31.1 bits (67), Expect = 0.20
Identities = 14/44 (31%), Positives = 24/44 (54%)
Frame = -3
Query: 151 MLRKAFQMFDTTKSGYIDVLKISTILNTMGQLFDDSELQALIDE 20
M+R+AF++FD +G I + + MG F + E+ +I E
Sbjct: 97 MIREAFRVFDKDGNGVITAQEFRYFMVHMGMQFSEEEVDEMIKE 140
Score = 29.5 bits (63), Expect = 0.60
Identities = 13/42 (30%), Positives = 24/42 (57%)
Frame = -3
Query: 145 RKAFQMFDTTKSGYIDVLKISTILNTMGQLFDDSELQALIDE 20
R+AF MFD +G I ++ + ++GQ + E+ +I+E
Sbjct: 27 REAFMMFDKDGNGTISTKELGIAMRSLGQNPTEQEILEMINE 68
>AF016435-6|AAB65882.1| 213|Caenorhabditis elegans Hypothetical
protein F59D6.7 protein.
Length = 213
Score = 30.3 bits (65), Expect = 0.34
Identities = 19/59 (32%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Frame = -3
Query: 193 ISVT*DTDDDQKMAMLRKAFQMFDTTKSGYIDVLKISTILNTM-GQLFDDSELQALIDE 20
IS D + + LR AF+M+D K+ YI + ILN+M G +L + D+
Sbjct: 118 ISKVKDNALNSRKDKLRFAFKMYDLNKNNYITREEFKVILNSMVGANITSDQLDKIADK 176
>Z70683-2|CAA94592.2| 717|Caenorhabditis elegans Hypothetical
protein F13B12.3 protein.
Length = 717
Score = 28.7 bits (61), Expect = 1.0
Identities = 19/79 (24%), Positives = 38/79 (48%), Gaps = 2/79 (2%)
Frame = -3
Query: 259 LYLYERRTPLYNPFHAPVVAKRISVT*DTDDDQKMAMLRKAFQMFDTTKSGYIDVLKIST 80
+Y+ E+ L++ H PV+A+ ++ DD+ A+L + F + +D
Sbjct: 133 VYVSEKMRKLFSGQHEPVIAEAFEKIQNSFDDECTALLDQCFHTSERDTRAVLDT-NYHL 191
Query: 79 ILNTMG--QLFDDSELQAL 29
++T G + +D E+ AL
Sbjct: 192 FIHTDGCPSVEEDMEVMAL 210
>U80453-3|AAV58885.1| 434|Caenorhabditis elegans Serine palmitoyl
transferase familyprotein 1, isoform b protein.
Length = 434
Score = 28.7 bits (61), Expect = 1.0
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +2
Query: 5 FGTRIFIDERLQFGIIEQLSHGVQDC*NLQNIDI 106
F R+FIDE FG+I + GV + N+ D+
Sbjct: 231 FKVRVFIDESWSFGVIGKTGRGVTEHFNVPMEDV 264
>U80453-2|AAK31446.1| 458|Caenorhabditis elegans Serine palmitoyl
transferase familyprotein 1, isoform a protein.
Length = 458
Score = 28.7 bits (61), Expect = 1.0
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +2
Query: 5 FGTRIFIDERLQFGIIEQLSHGVQDC*NLQNIDI 106
F R+FIDE FG+I + GV + N+ D+
Sbjct: 255 FKVRVFIDESWSFGVIGKTGRGVTEHFNVPMEDV 288
>U42848-7|AAA83612.2| 567|Caenorhabditis elegans Hypothetical
protein C31H1.8 protein.
Length = 567
Score = 28.7 bits (61), Expect = 1.0
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = -2
Query: 155 GDAPQSIPDVRHNEVRIYRCSEDFNNPEHHGTTV 54
G + S+PDVR +E + C DF+ H T+V
Sbjct: 328 GRSRMSLPDVRQHEGLVCECLGDFSLIRHRPTSV 361
>U40423-5|AAA81454.2| 156|Caenorhabditis elegans Unidentified
vitellogenin-linkedtranscript protein 2 protein.
Length = 156
Score = 28.3 bits (60), Expect = 1.4
Identities = 13/40 (32%), Positives = 21/40 (52%)
Frame = -3
Query: 148 LRKAFQMFDTTKSGYIDVLKISTILNTMGQLFDDSELQAL 29
L+ F+ FD GYI ++ ++ MGQ + EL A+
Sbjct: 23 LKGIFREFDLNGDGYIQREELRAVMQKMGQSPTEDELDAM 62
>Z70267-5|CAA94209.2| 143|Caenorhabditis elegans Hypothetical
protein K04C1.4 protein.
Length = 143
Score = 27.9 bits (59), Expect = 1.8
Identities = 12/39 (30%), Positives = 17/39 (43%)
Frame = -3
Query: 142 KAFQMFDTTKSGYIDVLKISTILNTMGQLFDDSELQALI 26
K FD G+I ++ +L TMG D E L+
Sbjct: 85 KGLSHFDKEGEGFITSAELRQVLTTMGDKLSDEEFDKLV 123
>AL110485-23|CAB60377.3| 770|Caenorhabditis elegans Hypothetical
protein Y46G5A.29 protein.
Length = 770
Score = 27.5 bits (58), Expect = 2.4
Identities = 18/60 (30%), Positives = 27/60 (45%), Gaps = 2/60 (3%)
Frame = -1
Query: 327 IRCYSACGILTREHNNYSRSPAVYICTNVGRHCITRFTRQ--WLPNAFLLHRTPMTIKRW 154
+ C ++CG+ + N + VYI +V + Q +P AFLL TIK W
Sbjct: 547 LNCAASCGVCVKVDNGTGKRK-VYIVADVNTSDESYLPLQPILMPFAFLLGEWESTIKGW 605
>U41625-3|AAA83326.1| 264|Caenorhabditis elegans Hypothetical
protein K03A1.4a protein.
Length = 264
Score = 27.1 bits (57), Expect = 3.2
Identities = 10/28 (35%), Positives = 19/28 (67%)
Frame = -3
Query: 148 LRKAFQMFDTTKSGYIDVLKISTILNTM 65
LR+ F MFD K G+I+ +++ +I+ +
Sbjct: 204 LREQFDMFDKDKDGFIEKMEMLSIVREL 231
>Z82095-2|CAB05027.2| 602|Caenorhabditis elegans Hypothetical
protein ZK849.4 protein.
Length = 602
Score = 26.6 bits (56), Expect = 4.2
Identities = 14/31 (45%), Positives = 21/31 (67%)
Frame = -3
Query: 109 GYIDVLKISTILNTMGQLFDDSELQALIDEN 17
G++ V +I +LN MG+ DD EL +ID+N
Sbjct: 367 GWMKVAEI--LLNPMGEDDDDFELNNIIDKN 395
>Z70783-6|CAA94856.1| 195|Caenorhabditis elegans Hypothetical
protein ZK856.8 protein.
Length = 195
Score = 26.6 bits (56), Expect = 4.2
Identities = 14/40 (35%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Frame = -3
Query: 139 AFQMFDTTKSGYIDVLKISTILNTM-GQLFDDSELQALID 23
AF+M+D K+ YI + ILN+M G +L + D
Sbjct: 118 AFKMYDLNKNDYITREEFKVILNSMVGANITSDQLDKIAD 157
>U80815-2|AAB37995.1| 1372|Caenorhabditis elegans Hypothetical
protein W02C12.1 protein.
Length = 1372
Score = 26.6 bits (56), Expect = 4.2
Identities = 20/62 (32%), Positives = 28/62 (45%), Gaps = 1/62 (1%)
Frame = -1
Query: 318 YSACGILTREHNNYSRSPAV-YICTNVGRHCITRFTRQWLPNAFLLHRTPMTIKRWRCSA 142
Y AC + R+ + RSPAV Y C G+ W PN ++P T+ R+
Sbjct: 728 YKACSVECRDGFEFPRSPAVFYTCAADGK---------WKPN-----KSPSTMFRYPQCT 773
Query: 141 KH 136
KH
Sbjct: 774 KH 775
>Z83221-9|CAB05710.1| 400|Caenorhabditis elegans Hypothetical
protein C49A1.2 protein.
Length = 400
Score = 26.2 bits (55), Expect = 5.5
Identities = 14/31 (45%), Positives = 21/31 (67%)
Frame = -3
Query: 109 GYIDVLKISTILNTMGQLFDDSELQALIDEN 17
G++ V +I +LN MG+ DD EL +ID+N
Sbjct: 292 GWMKVAEI--LLNPMGEDDDDFELNYVIDKN 320
>Z82095-8|CAB05029.1| 400|Caenorhabditis elegans Hypothetical
protein C49A1.2 protein.
Length = 400
Score = 26.2 bits (55), Expect = 5.5
Identities = 14/31 (45%), Positives = 21/31 (67%)
Frame = -3
Query: 109 GYIDVLKISTILNTMGQLFDDSELQALIDEN 17
G++ V +I +LN MG+ DD EL +ID+N
Sbjct: 292 GWMKVAEI--LLNPMGEDDDDFELNYVIDKN 320
>Z82095-3|CAB05028.1| 411|Caenorhabditis elegans Hypothetical
protein ZK849.5 protein.
Length = 411
Score = 26.2 bits (55), Expect = 5.5
Identities = 14/31 (45%), Positives = 20/31 (64%)
Frame = -3
Query: 109 GYIDVLKISTILNTMGQLFDDSELQALIDEN 17
G++ V +I +LN MG+ DD EL +ID N
Sbjct: 290 GWMKVAEI--LLNPMGEDEDDFELNFIIDNN 318
>Z73422-3|CAA97766.1| 523|Caenorhabditis elegans Hypothetical
protein B0564.4 protein.
Length = 523
Score = 26.2 bits (55), Expect = 5.5
Identities = 15/31 (48%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
Frame = -3
Query: 106 YIDVLK-ISTILNTMGQLFDDSELQALIDEN 17
Y+ LK I +LN G+ DD E ALID N
Sbjct: 288 YMGWLKVIEVMLNPFGEDDDDFETNALIDRN 318
>Z73422-2|CAA97765.1| 450|Caenorhabditis elegans Hypothetical
protein B0564.3 protein.
Length = 450
Score = 26.2 bits (55), Expect = 5.5
Identities = 15/31 (48%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
Frame = -3
Query: 106 YIDVLK-ISTILNTMGQLFDDSELQALIDEN 17
Y+ LK I +LN G+ DD E ALID N
Sbjct: 288 YMGWLKVIDVMLNPFGEDDDDFETNALIDRN 318
>Z66561-4|CAA91457.2| 185|Caenorhabditis elegans Hypothetical
protein F08G12.5 protein.
Length = 185
Score = 25.8 bits (54), Expect = 7.3
Identities = 10/30 (33%), Positives = 17/30 (56%)
Frame = -3
Query: 271 ITGSLYLYERRTPLYNPFHAPVVAKRISVT 182
+ S + + R P N FH P+ KR+S++
Sbjct: 68 VAHSEVMNDTREPNRNSFHCPICRKRVSMS 97
>U37429-9|AAA79344.3| 796|Caenorhabditis elegans Hypothetical
protein F09E5.5 protein.
Length = 796
Score = 25.4 bits (53), Expect = 9.7
Identities = 15/55 (27%), Positives = 25/55 (45%)
Frame = -1
Query: 282 NYSRSPAVYICTNVGRHCITRFTRQWLPNAFLLHRTPMTIKRWRCSAKHSRCSTQ 118
NY R + T++ + F+++WL + L MTI + KH R T+
Sbjct: 570 NYLREEVI---TDIAPSLVEIFSKKWLTGSAALETVCMTISDYYHDHKHLRPVTR 621
>U00041-1|AAA50671.3| 2248|Caenorhabditis elegans Abnormal cell
lineage protein 13 protein.
Length = 2248
Score = 25.4 bits (53), Expect = 9.7
Identities = 15/58 (25%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
Frame = -1
Query: 312 ACGILTREHNNYSRSPAVYICTNVGRHCITRF-TRQWLPNAFLLHRT-PMTIKRWRCS 145
AC +EH+ + S ++ C V R I + L N + R+ +T++R++C+
Sbjct: 1198 ACCAFCQEHHRFMSSHILFRCKRVSRCTICGVKSNDPLANRVHIQRSHALTLRRFQCA 1255
>L16621-8|AAA28228.1| 632|Caenorhabditis elegans Hypothetical
protein ZK688.2 protein.
Length = 632
Score = 25.4 bits (53), Expect = 9.7
Identities = 13/31 (41%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
Frame = -3
Query: 106 YIDVLKIS-TILNTMGQLFDDSELQALIDEN 17
Y+ +K++ +LN G+ DD E ALID N
Sbjct: 284 YMGWMKVAEAMLNPFGEDDDDFECNALIDRN 314
>AF245435-1|AAF87497.1| 2248|Caenorhabditis elegans zinc finger
protein LIN-13 protein.
Length = 2248
Score = 25.4 bits (53), Expect = 9.7
Identities = 15/58 (25%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
Frame = -1
Query: 312 ACGILTREHNNYSRSPAVYICTNVGRHCITRF-TRQWLPNAFLLHRT-PMTIKRWRCS 145
AC +EH+ + S ++ C V R I + L N + R+ +T++R++C+
Sbjct: 1198 ACCAFCQEHHRFMSSHILFRCKRVSRCTICGVKSNDPLANRVHIQRSHALTLRRFQCA 1255
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,277,424
Number of Sequences: 27780
Number of extensions: 170336
Number of successful extensions: 607
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 545
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 607
length of database: 12,740,198
effective HSP length: 72
effective length of database: 10,740,038
effective search space used: 397381406
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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