Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0022_F08
(218 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11_02_0058 + 7879859-7879951,7880844-7881078,7881165-7881535,788... 99 4e-22
03_05_0974 + 29324025-29324117,29325064-29325298,29325385-293257... 96 4e-21
07_03_0994 + 23190344-23190456,23191367-23191581,23191663-231918... 88 1e-18
03_02_0186 - 6243487-6243799,6243892-6244400,6244495-6244557,624... 81 9e-17
05_04_0306 + 20058640-20059159,20060406-20060819,20060921-200611... 48 1e-06
05_01_0412 - 3248405-3248458,3248533-3248637,3248950-3249078,324... 47 2e-06
01_02_0004 - 10097759-10098438,10098973-10099242,10099956-10100349 44 2e-05
01_06_1060 + 34162161-34162554,34162613-34162675,34163262-341635... 43 4e-05
03_05_0575 + 25747813-25748206,25748567-25748614,25750296-257505... 42 7e-05
03_01_0034 + 318432-318825,318902-319851 42 7e-05
06_03_1086 - 27494238-27494914,27495471-27495740,27495986-27496379 40 2e-04
03_06_0176 + 32158462-32158855,32159960-32160229,32160328-32160998 40 2e-04
02_01_0499 + 3619909-3620302,3621123-3621392,3621788-3622467 40 2e-04
01_05_0685 + 24273331-24273569,24275429-24275465,24275739-242758... 29 0.67
04_01_0383 + 5085697-5085724,5085816-5085927,5087249-5087285,508... 28 0.89
01_01_0524 - 3845637-3845727,3845803-3845896,3846415-3846497,384... 28 1.2
05_07_0299 - 29073900-29073984,29074125-29074158,29074269-290743... 27 1.6
08_02_1414 + 26901937-26902597,26903361-26903397,26903733-269037... 27 2.7
03_05_1078 + 30205876-30206346,30206624-30207001,30207967-302080... 26 3.6
02_05_0391 + 28563242-28563302,28563714-28563931,28564563-285646... 26 3.6
07_03_0741 - 21107566-21107838,21107964-21108102,21108189-211084... 25 6.3
07_01_0776 + 5983684-5983857,5983962-5984072,5984151-5984302,598... 25 6.3
03_02_0024 + 5079690-5081351 25 6.3
02_05_0910 - 32684836-32685259,32685911-32685987,32686179-32686421 25 6.3
02_01_0108 - 789597-790224,790441-790570,790946-791081 25 6.3
09_06_0115 + 20944586-20945185 25 8.3
07_01_0077 + 566895-567127,567207-567331,571204-571340,571437-57... 25 8.3
04_04_1147 + 31261435-31261763,31261915-31262736,31262934-312629... 25 8.3
04_01_0438 - 5723451-5723759,5723795-5723863,5724025-5724210,572... 25 8.3
03_05_0902 + 28643395-28643708,28643830-28643921,28644342-286444... 25 8.3
02_03_0229 + 16617371-16617970 25 8.3
>11_02_0058 +
7879859-7879951,7880844-7881078,7881165-7881535,
7881648-7882304
Length = 451
Score = 99.1 bits (236), Expect = 4e-22
Identities = 38/44 (86%), Positives = 43/44 (97%)
Frame = +2
Query: 86 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGG 217
MRECIS+H+GQAG+Q+GNACWELYCLEHGIQPDGQMP DKT+GG
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGG 44
>03_05_0974 +
29324025-29324117,29325064-29325298,29325385-29325755,
29325864-29326520
Length = 451
Score = 95.9 bits (228), Expect = 4e-21
Identities = 36/44 (81%), Positives = 43/44 (97%)
Frame = +2
Query: 86 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGG 217
MRECIS+H+GQAG+Q+GNACWELYCLEHGIQ DGQMP+D+T+GG
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQADGQMPSDRTVGG 44
>07_03_0994 +
23190344-23190456,23191367-23191581,23191663-23191862,
23192420-23192928,23193048-23193363
Length = 450
Score = 87.8 bits (208), Expect = 1e-18
Identities = 33/43 (76%), Positives = 40/43 (93%)
Frame = +2
Query: 86 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIG 214
MRE IS+H+GQAG+Q+GNACWELYCLEHGI+PDG MP+D T+G
Sbjct: 1 MREIISIHIGQAGIQVGNACWELYCLEHGIEPDGTMPSDTTVG 43
>03_02_0186 -
6243487-6243799,6243892-6244400,6244495-6244557,
6245482-6245681,6246125-6246519,6246776-6246888
Length = 530
Score = 81.4 bits (192), Expect = 9e-17
Identities = 31/39 (79%), Positives = 36/39 (92%)
Frame = +2
Query: 86 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTD 202
MRE IS+H+GQAG+Q+GN+CWELYCLEHGIQPDG MP D
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGLMPRD 39
>05_04_0306 +
20058640-20059159,20060406-20060819,20060921-20061190,
20062179-20062849
Length = 624
Score = 47.6 bits (108), Expect = 1e-06
Identities = 20/41 (48%), Positives = 27/41 (65%)
Frame = +2
Query: 68 QKTQYKMRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQ 190
+K + KMRE + + GQ G QIG+ WE+ C EHGI P G+
Sbjct: 175 KKGEEKMREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTGR 215
>05_01_0412 -
3248405-3248458,3248533-3248637,3248950-3249078,
3249279-3249353,3249520-3249624,3249714-3249767,
3249970-3250370,3250583-3250694,3250886-3251086,
3251844-3251972
Length = 454
Score = 47.2 bits (107), Expect = 2e-06
Identities = 22/43 (51%), Positives = 26/43 (60%)
Frame = +2
Query: 89 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGG 217
RE I++ VGQ G QIG W+ CLEHGI DG + T GG
Sbjct: 3 REIITIQVGQCGNQIGMEFWKQLCLEHGIGKDGLLEDFATQGG 45
>01_02_0004 - 10097759-10098438,10098973-10099242,10099956-10100349
Length = 447
Score = 44.0 bits (99), Expect = 2e-05
Identities = 18/35 (51%), Positives = 23/35 (65%)
Frame = +2
Query: 86 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQ 190
MRE + + GQ G QIG+ WE+ C EHGI P G+
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTGR 35
>01_06_1060 +
34162161-34162554,34162613-34162675,34163262-34163531,
34163944-34164623
Length = 468
Score = 42.7 bits (96), Expect = 4e-05
Identities = 18/35 (51%), Positives = 22/35 (62%)
Frame = +2
Query: 86 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQ 190
MRE + + GQ G QIG WE+ C EHGI P G+
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCDEHGIDPTGR 35
>03_05_0575 +
25747813-25748206,25748567-25748614,25750296-25750565,
25750658-25751334
Length = 462
Score = 41.9 bits (94), Expect = 7e-05
Identities = 17/34 (50%), Positives = 21/34 (61%)
Frame = +2
Query: 86 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDG 187
MRE + + GQ G QIG WE+ C EHG+ P G
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICGEHGVDPTG 34
>03_01_0034 + 318432-318825,318902-319851
Length = 447
Score = 41.9 bits (94), Expect = 7e-05
Identities = 18/42 (42%), Positives = 23/42 (54%)
Frame = +2
Query: 86 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTI 211
MRE + + GQ G QIG WE+ C EHGI G+ D +
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDATGRYDGDSDL 42
>06_03_1086 - 27494238-27494914,27495471-27495740,27495986-27496379
Length = 446
Score = 40.3 bits (90), Expect = 2e-04
Identities = 18/42 (42%), Positives = 23/42 (54%)
Frame = +2
Query: 86 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTI 211
MRE + + GQ G QIG WE+ C EHGI G+ D +
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSDL 42
>03_06_0176 + 32158462-32158855,32159960-32160229,32160328-32160998
Length = 444
Score = 40.3 bits (90), Expect = 2e-04
Identities = 17/42 (40%), Positives = 23/42 (54%)
Frame = +2
Query: 86 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTI 211
MRE + + GQ G QIG WE+ C EHG+ G+ D +
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGVDATGRYAGDSDL 42
>02_01_0499 + 3619909-3620302,3621123-3621392,3621788-3622467
Length = 447
Score = 40.3 bits (90), Expect = 2e-04
Identities = 18/42 (42%), Positives = 23/42 (54%)
Frame = +2
Query: 86 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTI 211
MRE + + GQ G QIG WE+ C EHGI G+ D +
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSDL 42
>01_05_0685 +
24273331-24273569,24275429-24275465,24275739-24275808,
24275978-24276082,24276205-24276355,24276454-24276536,
24276619-24276712,24276796-24276883
Length = 288
Score = 28.7 bits (61), Expect = 0.67
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = -3
Query: 213 PMVLSVGI*PSGWMPCSRQYSSQ 145
P+ LS I SGW+PCSR S+
Sbjct: 184 PVTLSAVIGLSGWLPCSRTLKSK 206
>04_01_0383 +
5085697-5085724,5085816-5085927,5087249-5087285,
5087512-5087581,5087704-5087808,5088022-5088172,
5088257-5088339,5089152-5089372,5089465-5089501,
5089668-5089753
Length = 309
Score = 28.3 bits (60), Expect = 0.89
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = -3
Query: 213 PMVLSVGI*PSGWMPCSRQYSSQ 145
P+ LS I SGW+PCSR S+
Sbjct: 151 PITLSAVISLSGWLPCSRTLRSK 173
>01_01_0524 -
3845637-3845727,3845803-3845896,3846415-3846497,
3846587-3846737,3847113-3847217,3847351-3847420,
3847551-3847587,3848155-3848257,3848441-3848480
Length = 257
Score = 27.9 bits (59), Expect = 1.2
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = -3
Query: 213 PMVLSVGI*PSGWMPCSRQYSSQ 145
P+ LSV + SGW+PC+R ++
Sbjct: 152 PVNLSVSVGLSGWLPCARSLKNK 174
>05_07_0299 -
29073900-29073984,29074125-29074158,29074269-29074351,
29074457-29074607,29074853-29074957,29075099-29075168,
29075374-29075410,29076732-29076843,29076956-29076983
Length = 234
Score = 27.5 bits (58), Expect = 1.6
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = -3
Query: 213 PMVLSVGI*PSGWMPCSR 160
P+ LS I SGW+PCSR
Sbjct: 151 PITLSAVISLSGWLPCSR 168
>08_02_1414 +
26901937-26902597,26903361-26903397,26903733-26903791,
26904198-26904388,26904591-26904680,26904833-26904926,
26905008-26905159,26905250-26905347,26905400-26905459,
26905460-26905598,26905686-26905784,26905883-26906018,
26906352-26906413
Length = 625
Score = 26.6 bits (56), Expect = 2.7
Identities = 7/13 (53%), Positives = 10/13 (76%)
Frame = +2
Query: 137 NACWELYCLEHGI 175
N CW+L C+EH +
Sbjct: 467 NLCWKLICMEHAV 479
>03_05_1078 +
30205876-30206346,30206624-30207001,30207967-30208092,
30209569-30209805
Length = 403
Score = 26.2 bits (55), Expect = 3.6
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = +2
Query: 107 HVGQAGVQIGNACWELYCLEHGIQPDGQMP 196
H G V++ AC+ L L++G + DG P
Sbjct: 373 HEGDGSVEVDEACFYLMGLDYGPKRDGFGP 402
>02_05_0391 +
28563242-28563302,28563714-28563931,28564563-28564637,
28564730-28565264,28565343-28565523,28565586-28565724,
28565826-28566067,28566157-28566322,28566591-28566698
Length = 574
Score = 26.2 bits (55), Expect = 3.6
Identities = 7/15 (46%), Positives = 12/15 (80%)
Frame = -1
Query: 98 CTHAFCIEFFELKCR 54
C+H+FC++ E +CR
Sbjct: 305 CSHSFCVKCMETQCR 319
>07_03_0741 -
21107566-21107838,21107964-21108102,21108189-21108426,
21108629-21108836,21108945-21109066,21109146-21109271,
21109356-21109774,21109844-21110268
Length = 649
Score = 25.4 bits (53), Expect = 6.3
Identities = 9/15 (60%), Positives = 11/15 (73%)
Frame = -2
Query: 148 PAGISDLDSGLANVY 104
PAGI+D D G+ N Y
Sbjct: 21 PAGIADCDEGVGNTY 35
>07_01_0776 +
5983684-5983857,5983962-5984072,5984151-5984302,
5984403-5984460,5984568-5984616,5984714-5984958,
5985129-5985206,5986016-5986246
Length = 365
Score = 25.4 bits (53), Expect = 6.3
Identities = 13/43 (30%), Positives = 22/43 (51%)
Frame = -2
Query: 214 PDGLVSWHLTIRLDAVLKAIQLPAGISDLDSGLANVYRDALTH 86
P+ + ++ I L + A+ +PAG + GLA RD + H
Sbjct: 220 PNATPNLNIGIDLWSTPPALAVPAGQGEASPGLALARRDGVAH 262
>03_02_0024 + 5079690-5081351
Length = 553
Score = 25.4 bits (53), Expect = 6.3
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = -2
Query: 181 RLDAVLKAIQLPAGISDLDSGLANVYRDALTH 86
RL + A+ +P GISD D +A V++ +H
Sbjct: 269 RLADIKNAVGIPEGISDEDEVVAVVHKSRGSH 300
>02_05_0910 - 32684836-32685259,32685911-32685987,32686179-32686421
Length = 247
Score = 25.4 bits (53), Expect = 6.3
Identities = 12/35 (34%), Positives = 17/35 (48%)
Frame = +3
Query: 111 LAKPESRSEMPAGSCIALSTASNLMVRCQLTRPSG 215
LA +S + M A + + L N +V C RP G
Sbjct: 61 LADDDSSAAMRAAAALPLFPQDNAVVECSKIRPRG 95
>02_01_0108 - 789597-790224,790441-790570,790946-791081
Length = 297
Score = 25.4 bits (53), Expect = 6.3
Identities = 9/25 (36%), Positives = 13/25 (52%)
Frame = -3
Query: 177 WMPCSRQYSSQQAFPIWTPAWPTCT 103
WMP S + Q+++ I WP T
Sbjct: 207 WMPMSAAAAGQESYSISAQHWPAST 231
>09_06_0115 + 20944586-20945185
Length = 199
Score = 25.0 bits (52), Expect = 8.3
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +1
Query: 115 PSRSPDRKCLLGAVLP*ARHP 177
PS + D+ CL G+ LP HP
Sbjct: 12 PSSTSDKGCLAGSPLPRPPHP 32
>07_01_0077 + 566895-567127,567207-567331,571204-571340,571437-571542,
571635-571885,572018-572128,572209-572320,572626-572716,
573168-573507,573678-573900,573946-574204,574274-574481,
574572-574622,574712-574870,574956-575120,575322-575399,
575732-576031,576107-576259,576871-576918,577019-577188,
577738-577852,578462-578623,578789-578893,578969-579199,
579277-579410,579484-579738,579822-580110,580214-580306,
580395-580520,580646-580897
Length = 1693
Score = 25.0 bits (52), Expect = 8.3
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = +1
Query: 37 LINLFYLHLSSKNS 78
L+N+FY HLS NS
Sbjct: 1126 LVNIFYKHLSGSNS 1139
>04_04_1147 +
31261435-31261763,31261915-31262736,31262934-31262970,
31262987-31263028,31263092-31263179,31264344-31264486
Length = 486
Score = 25.0 bits (52), Expect = 8.3
Identities = 11/20 (55%), Positives = 12/20 (60%)
Frame = +2
Query: 74 TQYKMRECISVHVGQAGVQI 133
T Y R+C VHVG G QI
Sbjct: 105 TVYGCRKCPQVHVGPVGHQI 124
>04_01_0438 -
5723451-5723759,5723795-5723863,5724025-5724210,
5724297-5724558,5724662-5724960,5725040-5725453,
5725533-5725899,5726002-5726146,5726562-5727558
Length = 1015
Score = 25.0 bits (52), Expect = 8.3
Identities = 12/35 (34%), Positives = 18/35 (51%)
Frame = -3
Query: 213 PMVLSVGI*PSGWMPCSRQYSSQQAFPIWTPAWPT 109
PMV + + P RQ+ +Q+FP+ PA T
Sbjct: 702 PMVFDICVEPHAPYRVMRQFGFRQSFPVPFPAGVT 736
>03_05_0902 +
28643395-28643708,28643830-28643921,28644342-28644443,
28645135-28645185,28645267-28645328,28645664-28645754,
28645911-28645975,28646053-28646247,28646346-28646465,
28646630-28646700,28646839-28647064,28647474-28647524,
28647629-28647857,28648140-28648279,28648527-28648652
Length = 644
Score = 25.0 bits (52), Expect = 8.3
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = +1
Query: 25 AERRLINLFYLHLSSKNSIQ 84
A+R L+N FY H+ SK Q
Sbjct: 587 AKRNLLNRFYAHVGSKEKKQ 606
>02_03_0229 + 16617371-16617970
Length = 199
Score = 25.0 bits (52), Expect = 8.3
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +1
Query: 115 PSRSPDRKCLLGAVLP*ARHP 177
PS + D+ CL G+ LP HP
Sbjct: 12 PSSTSDKGCLAGSPLPRPPHP 32
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,863,416
Number of Sequences: 37544
Number of extensions: 100924
Number of successful extensions: 367
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 366
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 367
length of database: 14,793,348
effective HSP length: 52
effective length of database: 12,841,060
effective search space used: 256821200
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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