BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0022_F07
(405 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT022163-1|AAY51557.1| 987|Drosophila melanogaster IP01335p pro... 28 5.4
AY089601-1|AAL90339.1| 987|Drosophila melanogaster RE19601p pro... 28 5.4
AE014134-3543|AAF57234.2| 987|Drosophila melanogaster CG31612-P... 28 5.4
AE014298-2695|AAX52505.1| 455|Drosophila melanogaster CG33542-P... 27 7.2
EU000366-1|ABS19623.1| 562|Drosophila melanogaster truncated cr... 27 9.5
AF288223-1|AAG01337.2| 751|Drosophila melanogaster Crossveinles... 27 9.5
AE013599-3194|AAF46719.2| 751|Drosophila melanogaster CG15671-P... 27 9.5
>BT022163-1|AAY51557.1| 987|Drosophila melanogaster IP01335p
protein.
Length = 987
Score = 27.9 bits (59), Expect = 5.4
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = -2
Query: 314 RHTFSCHSFVTTVTCVNARQSQETSYCECD 225
RHT SC +T T + Q+Q+ S CD
Sbjct: 669 RHTRSCQPLASTSTPADLSQAQKKSMYSCD 698
>AY089601-1|AAL90339.1| 987|Drosophila melanogaster RE19601p
protein.
Length = 987
Score = 27.9 bits (59), Expect = 5.4
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = -2
Query: 314 RHTFSCHSFVTTVTCVNARQSQETSYCECD 225
RHT SC +T T + Q+Q+ S CD
Sbjct: 669 RHTRSCQPLASTSTPADLSQAQKKSMYSCD 698
>AE014134-3543|AAF57234.2| 987|Drosophila melanogaster CG31612-PA
protein.
Length = 987
Score = 27.9 bits (59), Expect = 5.4
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = -2
Query: 314 RHTFSCHSFVTTVTCVNARQSQETSYCECD 225
RHT SC +T T + Q+Q+ S CD
Sbjct: 669 RHTRSCQPLASTSTPADLSQAQKKSMYSCD 698
>AE014298-2695|AAX52505.1| 455|Drosophila melanogaster CG33542-PA
protein.
Length = 455
Score = 27.5 bits (58), Expect = 7.2
Identities = 14/32 (43%), Positives = 20/32 (62%)
Frame = -3
Query: 295 TPS*QRSPA*TLDRARRQATANVIFFIVPRRL 200
TP+ QR+P + RRQA V + I+PR+L
Sbjct: 339 TPNRQRAPQPRGQKKRRQAQPVVTYKILPRKL 370
>EU000366-1|ABS19623.1| 562|Drosophila melanogaster truncated
crossveinless 2 protein.
Length = 562
Score = 27.1 bits (57), Expect = 9.5
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = +2
Query: 134 CASVCKGCTFDGSRYKFNSINTQSPWNNEEN 226
C CKGC+F G Y+ + S WN+ E+
Sbjct: 116 CCRRCKGCSFRGMSYE-----SGSEWNDPED 141
>AF288223-1|AAG01337.2| 751|Drosophila melanogaster Crossveinless 2
protein.
Length = 751
Score = 27.1 bits (57), Expect = 9.5
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = +2
Query: 134 CASVCKGCTFDGSRYKFNSINTQSPWNNEEN 226
C CKGC+F G Y+ + S WN+ E+
Sbjct: 116 CCRRCKGCSFRGMSYE-----SGSEWNDPED 141
>AE013599-3194|AAF46719.2| 751|Drosophila melanogaster CG15671-PA
protein.
Length = 751
Score = 27.1 bits (57), Expect = 9.5
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = +2
Query: 134 CASVCKGCTFDGSRYKFNSINTQSPWNNEEN 226
C CKGC+F G Y+ + S WN+ E+
Sbjct: 116 CCRRCKGCSFRGMSYE-----SGSEWNDPED 141
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,044,220
Number of Sequences: 53049
Number of extensions: 328052
Number of successful extensions: 1170
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1161
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1170
length of database: 24,988,368
effective HSP length: 77
effective length of database: 20,903,595
effective search space used: 1191504915
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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