Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0022_F06
(449 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_1253 - 35753546-35753686,35753759-35753885,35753970-357541... 213 4e-56
03_06_0466 - 34134138-34134278,34134355-34134481,34134558-341347... 212 1e-55
10_06_0053 - 10110617-10111271,10112023-10112417,10112565-101126... 150 4e-37
05_03_0026 + 7466017-7466034,7466340-7466405,7466572-7466833,746... 43 1e-04
12_01_0932 + 9253975-9254676,9254976-9255092,9255160-9255192 30 0.75
09_04_0614 - 18962141-18962716,18962839-18963119,18964092-18964293 30 0.99
06_02_0197 - 12912818-12913411,12913505-12913732 30 0.99
06_01_0155 + 1152607-1152721,1152781-1154129 28 3.0
06_01_0152 + 1136202-1136316,1136376-1137583 28 3.0
02_01_0743 - 5530184-5531078,5531160-5531405,5531815-5532450,553... 28 4.0
08_01_0378 + 3360215-3360253,3360326-3360437,3362176-3362213,336... 27 7.0
05_04_0148 - 18426903-18427106,18430516-18430594,18430752-184309... 27 7.0
03_01_0522 - 3919120-3919696,3919835-3919919,3919955-3919985,392... 27 7.0
12_01_0986 - 10009518-10009839,10009958-10011544,10012515-10013311 27 9.2
06_01_0267 - 1972988-1973148,1973275-1973403,1973881-1974024,197... 27 9.2
04_02_0034 - 8999618-9000358,9001439-9001618,9001666-9003621,900... 27 9.2
03_06_0741 + 35893538-35895600,35896274-35896474,35896701-358968... 27 9.2
03_01_0611 + 4493618-4493641,4494705-4494730,4495758-4497471,449... 27 9.2
02_01_0335 + 2386902-2386906,2386976-2387282,2387664-2387777,239... 27 9.2
02_01_0125 + 920128-920392,920491-921839,921921-922084,922340-92... 27 9.2
01_01_0413 - 3107668-3107796,3107879-3107971,3108082-3108253,310... 27 9.2
>01_06_1253 -
35753546-35753686,35753759-35753885,35753970-35754125,
35754761-35754853,35757132-35757265,35757339-35757465,
35757550-35757705,35758321-35758325
Length = 312
Score = 213 bits (521), Expect = 4e-56
Identities = 97/146 (66%), Positives = 112/146 (76%)
Frame = +2
Query: 11 RVRAIVMGKPRGIRTARKHVNHRREQRWADKEFKKAHMGTRWKANPFGGASHAKGIVLEK 190
R ++ MGK RG+ RK HRR QRWADK +KK+H+G WK PF G+SHAKGIVLEK
Sbjct: 165 RCPSVNMGKTRGMGAGRKLKTHRRNQRWADKAYKKSHLGNEWK-KPFAGSSHAKGIVLEK 223
Query: 191 VGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEENDEV*VAGFGRKGHAVGD 370
+G+EAKQPNSAIRKC RVQL+KNGKK+ AFVP DGCLN IEENDEV +AGFGRKGHAVGD
Sbjct: 224 IGIEAKQPNSAIRKCARVQLVKNGKKIAAFVPNDGCLNFIEENDEVLIAGFGRKGHAVGD 283
Query: 371 IPGVRFKXXXXXXXXXXXXYKEQKER 448
IPGVRFK +KE+KE+
Sbjct: 284 IPGVRFKVVKVSGVSLLALFKEKKEK 309
Score = 212 bits (518), Expect = 1e-55
Identities = 96/140 (68%), Positives = 109/140 (77%)
Frame = +2
Query: 29 MGKPRGIRTARKHVNHRREQRWADKEFKKAHMGTRWKANPFGGASHAKGIVLEKVGVEAK 208
MGK RG+ RK HRR QRWADK +KK+H+G WK PF G+SHAKGIVLEK+G+EAK
Sbjct: 1 MGKTRGMGAGRKLKTHRRNQRWADKAYKKSHLGNEWK-KPFAGSSHAKGIVLEKIGIEAK 59
Query: 209 QPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEENDEV*VAGFGRKGHAVGDIPGVRF 388
QPNSAIRKC RVQL+KNGKK+ AFVP DGCLN IEENDEV +AGFGRKGHAVGDIPGVRF
Sbjct: 60 QPNSAIRKCARVQLVKNGKKIAAFVPNDGCLNFIEENDEVLIAGFGRKGHAVGDIPGVRF 119
Query: 389 KXXXXXXXXXXXXYKEQKER 448
K +KE+KE+
Sbjct: 120 KVVKVSGVSLLALFKEKKEK 139
>03_06_0466 -
34134138-34134278,34134355-34134481,34134558-34134713,
34135831-34135835
Length = 142
Score = 212 bits (518), Expect = 1e-55
Identities = 96/140 (68%), Positives = 109/140 (77%)
Frame = +2
Query: 29 MGKPRGIRTARKHVNHRREQRWADKEFKKAHMGTRWKANPFGGASHAKGIVLEKVGVEAK 208
MGK RG+ RK HRR QRWADK +KK+H+G WK PF G+SHAKGIVLEK+G+EAK
Sbjct: 1 MGKTRGMGAGRKLKTHRRNQRWADKAYKKSHLGNEWK-KPFAGSSHAKGIVLEKIGIEAK 59
Query: 209 QPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEENDEV*VAGFGRKGHAVGDIPGVRF 388
QPNSAIRKC RVQL+KNGKK+ AFVP DGCLN IEENDEV +AGFGRKGHAVGDIPGVRF
Sbjct: 60 QPNSAIRKCARVQLVKNGKKIAAFVPNDGCLNFIEENDEVLIAGFGRKGHAVGDIPGVRF 119
Query: 389 KXXXXXXXXXXXXYKEQKER 448
K +KE+KE+
Sbjct: 120 KVVKVSGVSLLALFKEKKEK 139
>10_06_0053 -
10110617-10111271,10112023-10112417,10112565-10112650,
10112973-10113021,10114164-10114290,10114372-10114526,
10114730-10114948
Length = 561
Score = 150 bits (364), Expect = 4e-37
Identities = 72/112 (64%), Positives = 83/112 (74%), Gaps = 1/112 (0%)
Frame = +2
Query: 8 DRVRAIVMG-KPRGIRTARKHVNHRREQRWADKEFKKAHMGTRWKANPFGGASHAKGIVL 184
+RVRA G K G+ RK HRR QRWADK +KK+H G WK PF G+SHAKGIVL
Sbjct: 64 ERVRAWSCGAKTCGMGAGRKLKTHRRNQRWADKAYKKSHFGNEWK-KPFAGSSHAKGIVL 122
Query: 185 EKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEENDEV*VAG 340
EK+G+EAKQPNSAI KC RVQL+KNGKK+ AFVP DGCLN I+EN+ V G
Sbjct: 123 EKIGIEAKQPNSAICKCARVQLVKNGKKIAAFVPNDGCLNFIKENEVAYVDG 174
>05_03_0026 +
7466017-7466034,7466340-7466405,7466572-7466833,
7467254-7467294
Length = 128
Score = 42.7 bits (96), Expect = 1e-04
Identities = 18/24 (75%), Positives = 21/24 (87%)
Frame = +2
Query: 320 DEV*VAGFGRKGHAVGDIPGVRFK 391
DEV ++GFG KGHAVGDI GVRF+
Sbjct: 67 DEVLISGFGHKGHAVGDIRGVRFE 90
>12_01_0932 + 9253975-9254676,9254976-9255092,9255160-9255192
Length = 283
Score = 30.3 bits (65), Expect = 0.75
Identities = 14/40 (35%), Positives = 23/40 (57%)
Frame = +1
Query: 1 ARGSCSRYRNG*TSGYSHGAQARESSSRAAMGRQGIQKSP 120
A+ +C R +G +GY HG + + SSR + R G+ +P
Sbjct: 182 AKRACYRV-HGMATGYCHGCRCQRCSSRPSRDRDGVAWAP 220
>09_04_0614 - 18962141-18962716,18962839-18963119,18964092-18964293
Length = 352
Score = 29.9 bits (64), Expect = 0.99
Identities = 18/44 (40%), Positives = 20/44 (45%)
Frame = -3
Query: 402 TLTTLNLTPGMSPTAWPLRPNPATHTSSFSSMWLRQPSRGTNAV 271
TL+ LNL G SP P P P SM + QP TN V
Sbjct: 254 TLSGLNLNLGSSPAMPPPPPPPPQSILQAMSMPMNQPRSTTNQV 297
>06_02_0197 - 12912818-12913411,12913505-12913732
Length = 273
Score = 29.9 bits (64), Expect = 0.99
Identities = 14/33 (42%), Positives = 21/33 (63%)
Frame = -1
Query: 245 VHEHTYEWLNSAAWLQRQLFRGRCP*HEMHHRR 147
V +H WL +A+ LQR +FR H++HH+R
Sbjct: 186 VDDHCGLWLPAASPLQR-VFRNNAAYHDVHHQR 217
>06_01_0155 + 1152607-1152721,1152781-1154129
Length = 487
Score = 28.3 bits (60), Expect = 3.0
Identities = 11/20 (55%), Positives = 12/20 (60%)
Frame = -1
Query: 62 CAPCEYPEVYPLR*REHDPR 3
CAPC PE YP + DPR
Sbjct: 177 CAPCPMPECYPQQNALFDPR 196
>06_01_0152 + 1136202-1136316,1136376-1137583
Length = 440
Score = 28.3 bits (60), Expect = 3.0
Identities = 11/20 (55%), Positives = 12/20 (60%)
Frame = -1
Query: 62 CAPCEYPEVYPLR*REHDPR 3
CAPC PE YP + DPR
Sbjct: 177 CAPCPMPECYPQQNALFDPR 196
>02_01_0743 -
5530184-5531078,5531160-5531405,5531815-5532450,
5534499-5534607,5536157-5536321,5536446-5536543,
5536648-5536898
Length = 799
Score = 27.9 bits (59), Expect = 4.0
Identities = 11/36 (30%), Positives = 20/36 (55%)
Frame = +3
Query: 279 SCRVMVASTTLRRTMRCEWQDSVVKATLLVTFLESD 386
SC + L RT+R +W + +++ L+ T +E D
Sbjct: 581 SCPHVAGVVGLLRTLRPDWSPAAIRSALMTTAVEVD 616
>08_01_0378 +
3360215-3360253,3360326-3360437,3362176-3362213,
3363949-3363966,3364629-3364847,3364937-3366727,
3367764-3367827,3367915-3367975,3368685-3368694
Length = 783
Score = 27.1 bits (57), Expect = 7.0
Identities = 15/50 (30%), Positives = 22/50 (44%), Gaps = 1/50 (2%)
Frame = -2
Query: 385 SDS-RNVTNSVAFTTESCHSHLIVLLNVVEATITRHECCHFLAVLNELYT 239
SDS + V+ V S +SHL LN+ H CC + L++
Sbjct: 599 SDSWKEVSEEVVVYQHSAYSHLSYSLNIHHCFSNSHFCCQGRLAFDALFS 648
>05_04_0148 -
18426903-18427106,18430516-18430594,18430752-18430935,
18431020-18431063,18432028-18432165,18432713-18434511
Length = 815
Score = 27.1 bits (57), Expect = 7.0
Identities = 16/58 (27%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
Frame = -3
Query: 405 ATLTTLNLTP-GMSPTAWPLRPNPATHTSSFSSMWLRQPSRGTNAVTFLPFLMSCTRT 235
+T T+ + P SP+ P+P +T + S++ R P RG+ L +L+ T
Sbjct: 16 STSTSSSSPPDSASPSFSFYHPSPPNYTLAVSNLSCRDPRRGSGGAGLLSWLLGSFST 73
>03_01_0522 -
3919120-3919696,3919835-3919919,3919955-3919985,
3920078-3920158,3920271-3920338,3920645-3920698,
3921023-3922379
Length = 750
Score = 27.1 bits (57), Expect = 7.0
Identities = 17/55 (30%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
Frame = -3
Query: 441 FCSLYRARS-DTFATLTTLNLTPGMSPTAWPLRPNPATHTSSFSSMWLRQPSRGT 280
FC R+ + TFAT + P ++P WP+ +P S ++W P GT
Sbjct: 637 FCPSVRSLAMQTFATPGPILPGPPVTPMQWPVFISPPQQQLSACAVW---PQAGT 688
>12_01_0986 - 10009518-10009839,10009958-10011544,10012515-10013311
Length = 901
Score = 26.6 bits (56), Expect = 9.2
Identities = 15/52 (28%), Positives = 23/52 (44%)
Frame = -2
Query: 397 NHLKSDSRNVTNSVAFTTESCHSHLIVLLNVVEATITRHECCHFLAVLNELY 242
+H+K V NS+ F I+LL+ + I C +L+V E Y
Sbjct: 376 SHMKEQWEQVHNSIGFVFSQQGIRDILLLSYYDLPINLKTCLLYLSVFPEDY 427
>06_01_0267 -
1972988-1973148,1973275-1973403,1973881-1974024,
1974368-1974493,1974595-1974720,1975149-1975241,
1975465-1975606,1976747-1976878,1976943-1977080,
1977431-1977523,1978186-1978389,1978568-1978656,
1978839-1978988,1979088-1979253,1979355-1979576,
1979687-1979872,1980289-1980411,1980511-1980611,
1982005-1982155
Length = 891
Score = 26.6 bits (56), Expect = 9.2
Identities = 11/35 (31%), Positives = 19/35 (54%)
Frame = -2
Query: 382 DSRNVTNSVAFTTESCHSHLIVLLNVVEATITRHE 278
++ V + TES SH ++++NV A +HE
Sbjct: 239 EAHRVAANTKLNTESSRSHALLMVNVRRAVKGKHE 273
>04_02_0034 -
8999618-9000358,9001439-9001618,9001666-9003621,
9004647-9004786,9004871-9005282,9006399-9006638
Length = 1222
Score = 26.6 bits (56), Expect = 9.2
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = +2
Query: 80 REQRWADKEFKKAHMGTRWKANPFGG 157
R +RW DK+ K R KA+PF G
Sbjct: 245 RTKRWHDKQIKIKKFKPRDKASPFCG 270
>03_06_0741 +
35893538-35895600,35896274-35896474,35896701-35896814,
35897570-35897649,35897772-35897896,35898008-35898079
Length = 884
Score = 26.6 bits (56), Expect = 9.2
Identities = 9/23 (39%), Positives = 16/23 (69%)
Frame = +3
Query: 96 PTRNSKKPTWVRDGRRTPSVVHL 164
PT+++ +PTWV + P+V+ L
Sbjct: 65 PTQHAPEPTWVNPSKPKPTVLSL 87
>03_01_0611 +
4493618-4493641,4494705-4494730,4495758-4497471,
4498179-4499263,4499351-4500296
Length = 1264
Score = 26.6 bits (56), Expect = 9.2
Identities = 19/70 (27%), Positives = 31/70 (44%), Gaps = 1/70 (1%)
Frame = -3
Query: 435 SLYRARSDTFATLTTLNLTPGMSPTAW-PLRPNPATHTSSFSSMWLRQPSRGTNAVTFLP 259
SLY A + ATLT +NL + + P +P + + + L+ + FLP
Sbjct: 199 SLYVA---SMATLTVVNLNNDSALRVYEPFSTDPQFYVYGYDDLVLQPRENASVTFIFLP 255
Query: 258 FLMSCTRTHL 229
L+ + HL
Sbjct: 256 KLLGSSSAHL 265
>02_01_0335 +
2386902-2386906,2386976-2387282,2387664-2387777,
2390252-2390320,2390416-2390715,2390829-2390930,
2391085-2391279,2391377-2391664,2391942-2392128,
2393168-2393272,2393778-2393824,2393982-2394074
Length = 603
Score = 26.6 bits (56), Expect = 9.2
Identities = 18/68 (26%), Positives = 32/68 (47%)
Frame = +2
Query: 86 QRWADKEFKKAHMGTRWKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGK 265
++W E K+ T++ F +HA G+++ G+E +++I K GK
Sbjct: 439 EKWRRAEVPKSDSVTQY----FKNITHANGVIIHPAGLECSL-HASIDALGSCYGDKQGK 493
Query: 266 KVTAFVPR 289
K A+V R
Sbjct: 494 KYRAWVDR 501
>02_01_0125 +
920128-920392,920491-921839,921921-922084,922340-922370,
922534-922565,922730-923060,923210-923713
Length = 891
Score = 26.6 bits (56), Expect = 9.2
Identities = 10/30 (33%), Positives = 15/30 (50%)
Frame = -3
Query: 135 HLVPMWAFLNSLSAHRCSRR*FTCLRAVRI 46
H+V WAFL + C F C+ V++
Sbjct: 577 HIVNSWAFLQPFTLQMCQVLQFACVNEVQL 606
>01_01_0413 -
3107668-3107796,3107879-3107971,3108082-3108253,
3108341-3108417,3108514-3108673,3108766-3108875,
3109384-3109443,3109545-3109618,3109748-3109871,
3110795-3110872,3111169-3111275,3112572-3112673,
3112800-3112815
Length = 433
Score = 26.6 bits (56), Expect = 9.2
Identities = 13/43 (30%), Positives = 22/43 (51%)
Frame = -2
Query: 154 TEGVRLPSRTHVGFFEFLVGPSLLATMIHVLARRANTPRFTHY 26
T ++P H+ + +G S A ++ VLAR ANT + +
Sbjct: 183 TTATKVPGGWHIDGQKRWIGNSTFADVLVVLARNANTKQLNGF 225
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,582,037
Number of Sequences: 37544
Number of extensions: 299937
Number of successful extensions: 869
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 853
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 865
length of database: 14,793,348
effective HSP length: 76
effective length of database: 11,940,004
effective search space used: 871620292
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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