Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0022_F06
(449 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
D14530-1|BAA03400.1| 143|Homo sapiens yeast ribosomal protein S... 231 6e-61
CR456996-1|CAG33277.1| 143|Homo sapiens RPS23 protein. 231 6e-61
BC070221-1|AAH70221.1| 143|Homo sapiens ribosomal protein S23 p... 231 6e-61
AB007158-1|BAA25822.1| 59|Homo sapiens ribosomal protein S23 p... 85 8e-17
Y11681-2|CAA72377.1| 138|Homo sapiens mitochondrial ribosomal p... 47 3e-05
CR407609-1|CAG28537.1| 138|Homo sapiens MRPS12 protein. 47 3e-05
BC007499-1|AAH07499.1| 138|Homo sapiens mitochondrial ribosomal... 47 3e-05
BC006424-1|AAH06424.1| 138|Homo sapiens mitochondrial ribosomal... 47 3e-05
BC001617-1|AAH01617.1| 138|Homo sapiens mitochondrial ribosomal... 47 3e-05
AF058761-1|AAC64704.1| 138|Homo sapiens ribosomal protein S12 p... 47 3e-05
X72012-1|CAA50891.1| 625|Homo sapiens endoglin protein. 30 4.2
DQ866809-1|ABI75346.1| 625|Homo sapiens endoglin (Osler-Rendu-W... 30 4.2
AL162586-6|CAI39765.1| 625|Homo sapiens endoglin (Osler-Rendu-W... 30 4.2
AL157935-2|CAI12605.1| 625|Homo sapiens endoglin (Osler-Rendu-W... 30 4.2
BX248133-9|CAM26111.1| 891|Homo sapiens chromosome 6 open readi... 29 9.7
BA000025-13|BAB63304.1| 852|Homo sapiens G7C protein. 29 9.7
AL662899-45|CAI18431.2| 891|Homo sapiens chromosome 6 open read... 29 9.7
AL662834-10|CAI17731.2| 891|Homo sapiens chromosome 6 open read... 29 9.7
AF134726-11|AAD21820.1| 852|Homo sapiens NG37 protein. 29 9.7
>D14530-1|BAA03400.1| 143|Homo sapiens yeast ribosomal protein S28
homologue protein.
Length = 143
Score = 231 bits (566), Expect = 6e-61
Identities = 109/140 (77%), Positives = 118/140 (84%)
Frame = +2
Query: 29 MGKPRGIRTARKHVNHRREQRWADKEFKKAHMGTRWKANPFGGASHAKGIVLEKVGVEAK 208
MGK RG+RTARK +HRR+Q+W DK++KKAH+GT KANPFGGASHAKGIVLEKVGVEAK
Sbjct: 1 MGKCRGLRTARKLRSHRRDQKWHDKQYKKAHLGTALKANPFGGASHAKGIVLEKVGVEAK 60
Query: 209 QPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEENDEV*VAGFGRKGHAVGDIPGVRF 388
QPNSAIRKCVRVQLIKNGKK+TAFVP DGCLN IEENDEV VAGFGRKGHAVGDIPGVRF
Sbjct: 61 QPNSAIRKCVRVQLIKNGKKITAFVPNDGCLNFIEENDEVLVAGFGRKGHAVGDIPGVRF 120
Query: 389 KXXXXXXXXXXXXYKEQKER 448
K YK +KER
Sbjct: 121 KVVKVANVSLLALYKGKKER 140
>CR456996-1|CAG33277.1| 143|Homo sapiens RPS23 protein.
Length = 143
Score = 231 bits (566), Expect = 6e-61
Identities = 109/140 (77%), Positives = 118/140 (84%)
Frame = +2
Query: 29 MGKPRGIRTARKHVNHRREQRWADKEFKKAHMGTRWKANPFGGASHAKGIVLEKVGVEAK 208
MGK RG+RTARK +HRR+Q+W DK++KKAH+GT KANPFGGASHAKGIVLEKVGVEAK
Sbjct: 1 MGKCRGLRTARKLRSHRRDQKWHDKQYKKAHLGTALKANPFGGASHAKGIVLEKVGVEAK 60
Query: 209 QPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEENDEV*VAGFGRKGHAVGDIPGVRF 388
QPNSAIRKCVRVQLIKNGKK+TAFVP DGCLN IEENDEV VAGFGRKGHAVGDIPGVRF
Sbjct: 61 QPNSAIRKCVRVQLIKNGKKITAFVPNDGCLNFIEENDEVLVAGFGRKGHAVGDIPGVRF 120
Query: 389 KXXXXXXXXXXXXYKEQKER 448
K YK +KER
Sbjct: 121 KVVKVANVSLLALYKGKKER 140
>BC070221-1|AAH70221.1| 143|Homo sapiens ribosomal protein S23
protein.
Length = 143
Score = 231 bits (566), Expect = 6e-61
Identities = 109/140 (77%), Positives = 118/140 (84%)
Frame = +2
Query: 29 MGKPRGIRTARKHVNHRREQRWADKEFKKAHMGTRWKANPFGGASHAKGIVLEKVGVEAK 208
MGK RG+RTARK +HRR+Q+W DK++KKAH+GT KANPFGGASHAKGIVLEKVGVEAK
Sbjct: 1 MGKCRGLRTARKLRSHRRDQKWHDKQYKKAHLGTALKANPFGGASHAKGIVLEKVGVEAK 60
Query: 209 QPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEENDEV*VAGFGRKGHAVGDIPGVRF 388
QPNSAIRKCVRVQLIKNGKK+TAFVP DGCLN IEENDEV VAGFGRKGHAVGDIPGVRF
Sbjct: 61 QPNSAIRKCVRVQLIKNGKKITAFVPNDGCLNFIEENDEVLVAGFGRKGHAVGDIPGVRF 120
Query: 389 KXXXXXXXXXXXXYKEQKER 448
K YK +KER
Sbjct: 121 KVVKVANVSLLALYKGKKER 140
>AB007158-1|BAA25822.1| 59|Homo sapiens ribosomal protein S23
protein.
Length = 59
Score = 85.4 bits (202), Expect = 8e-17
Identities = 40/57 (70%), Positives = 41/57 (71%)
Frame = +2
Query: 278 FVPRDGCLNHIEENDEV*VAGFGRKGHAVGDIPGVRFKXXXXXXXXXXXXYKEQKER 448
FVP DGCLN IEENDEV VAGFGRKGHAVGDIPGVRFK YK +KER
Sbjct: 1 FVPNDGCLNFIEENDEVLVAGFGRKGHAVGDIPGVRFKVVKVANVSLLALYKGKKER 57
>Y11681-2|CAA72377.1| 138|Homo sapiens mitochondrial ribosomal
protein S12 precursor protein.
Length = 138
Score = 47.2 bits (107), Expect = 3e-05
Identities = 32/83 (38%), Positives = 46/83 (55%)
Frame = +2
Query: 137 KANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEE 316
K P G KG+VL + K+PNSA RKC RV+L G++ F+P +G + ++E
Sbjct: 48 KLGPTEGRPQLKGVVLCTFTRKPKKPNSANRKCCRVRL-STGREAVCFIPGEG--HTLQE 104
Query: 317 NDEV*VAGFGRKGHAVGDIPGVR 385
+ V V G GR D+PGV+
Sbjct: 105 HQIVLVEG-GR----TQDLPGVK 122
>CR407609-1|CAG28537.1| 138|Homo sapiens MRPS12 protein.
Length = 138
Score = 47.2 bits (107), Expect = 3e-05
Identities = 32/83 (38%), Positives = 46/83 (55%)
Frame = +2
Query: 137 KANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEE 316
K P G KG+VL + K+PNSA RKC RV+L G++ F+P +G + ++E
Sbjct: 48 KLGPTEGRPQLKGVVLCTFTRKPKKPNSANRKCCRVRL-STGREAVCFIPGEG--HTLQE 104
Query: 317 NDEV*VAGFGRKGHAVGDIPGVR 385
+ V V G GR D+PGV+
Sbjct: 105 HQIVLVEG-GR----TQDLPGVK 122
>BC007499-1|AAH07499.1| 138|Homo sapiens mitochondrial ribosomal
protein S12 protein.
Length = 138
Score = 47.2 bits (107), Expect = 3e-05
Identities = 32/83 (38%), Positives = 46/83 (55%)
Frame = +2
Query: 137 KANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEE 316
K P G KG+VL + K+PNSA RKC RV+L G++ F+P +G + ++E
Sbjct: 48 KLGPTEGRPQLKGVVLCTFTRKPKKPNSANRKCCRVRL-STGREAVCFIPGEG--HTLQE 104
Query: 317 NDEV*VAGFGRKGHAVGDIPGVR 385
+ V V G GR D+PGV+
Sbjct: 105 HQIVLVEG-GR----TQDLPGVK 122
>BC006424-1|AAH06424.1| 138|Homo sapiens mitochondrial ribosomal
protein S12 protein.
Length = 138
Score = 47.2 bits (107), Expect = 3e-05
Identities = 32/83 (38%), Positives = 46/83 (55%)
Frame = +2
Query: 137 KANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEE 316
K P G KG+VL + K+PNSA RKC RV+L G++ F+P +G + ++E
Sbjct: 48 KLGPTEGRPQLKGVVLCTFTRKPKKPNSANRKCCRVRL-STGREAVCFIPGEG--HTLQE 104
Query: 317 NDEV*VAGFGRKGHAVGDIPGVR 385
+ V V G GR D+PGV+
Sbjct: 105 HQIVLVEG-GR----TQDLPGVK 122
>BC001617-1|AAH01617.1| 138|Homo sapiens mitochondrial ribosomal
protein S12 protein.
Length = 138
Score = 47.2 bits (107), Expect = 3e-05
Identities = 32/83 (38%), Positives = 46/83 (55%)
Frame = +2
Query: 137 KANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEE 316
K P G KG+VL + K+PNSA RKC RV+L G++ F+P +G + ++E
Sbjct: 48 KLGPTEGRPQLKGVVLCTFTRKPKKPNSANRKCCRVRL-STGREAVCFIPGEG--HTLQE 104
Query: 317 NDEV*VAGFGRKGHAVGDIPGVR 385
+ V V G GR D+PGV+
Sbjct: 105 HQIVLVEG-GR----TQDLPGVK 122
>AF058761-1|AAC64704.1| 138|Homo sapiens ribosomal protein S12
protein.
Length = 138
Score = 47.2 bits (107), Expect = 3e-05
Identities = 32/83 (38%), Positives = 46/83 (55%)
Frame = +2
Query: 137 KANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEE 316
K P G KG+VL + K+PNSA RKC RV+L G++ F+P +G + ++E
Sbjct: 48 KLGPTEGRPQLKGVVLCTFTRKPKKPNSANRKCCRVRL-STGREAVCFIPGEG--HTLQE 104
Query: 317 NDEV*VAGFGRKGHAVGDIPGVR 385
+ V V G GR D+PGV+
Sbjct: 105 HQIVLVEG-GR----TQDLPGVK 122
>X72012-1|CAA50891.1| 625|Homo sapiens endoglin protein.
Length = 625
Score = 29.9 bits (64), Expect = 4.2
Identities = 13/41 (31%), Positives = 23/41 (56%)
Frame = -2
Query: 160 CTTEGVRLPSRTHVGFFEFLVGPSLLATMIHVLARRANTPR 38
CT++G+ LP+ + F FL+G L A + ++ + PR
Sbjct: 582 CTSKGLVLPAVLGITFGAFLIGALLTAALWYIYSHTREYPR 622
>DQ866809-1|ABI75346.1| 625|Homo sapiens endoglin
(Osler-Rendu-Weber syndrome 1) protein.
Length = 625
Score = 29.9 bits (64), Expect = 4.2
Identities = 13/41 (31%), Positives = 23/41 (56%)
Frame = -2
Query: 160 CTTEGVRLPSRTHVGFFEFLVGPSLLATMIHVLARRANTPR 38
CT++G+ LP+ + F FL+G L A + ++ + PR
Sbjct: 582 CTSKGLVLPAVLGITFGAFLIGALLTAALWYIYSHTREYPR 622
>AL162586-6|CAI39765.1| 625|Homo sapiens endoglin
(Osler-Rendu-Weber syndrome 1) protein.
Length = 625
Score = 29.9 bits (64), Expect = 4.2
Identities = 13/41 (31%), Positives = 23/41 (56%)
Frame = -2
Query: 160 CTTEGVRLPSRTHVGFFEFLVGPSLLATMIHVLARRANTPR 38
CT++G+ LP+ + F FL+G L A + ++ + PR
Sbjct: 582 CTSKGLVLPAVLGITFGAFLIGALLTAALWYIYSHTREYPR 622
>AL157935-2|CAI12605.1| 625|Homo sapiens endoglin
(Osler-Rendu-Weber syndrome 1) protein.
Length = 625
Score = 29.9 bits (64), Expect = 4.2
Identities = 13/41 (31%), Positives = 23/41 (56%)
Frame = -2
Query: 160 CTTEGVRLPSRTHVGFFEFLVGPSLLATMIHVLARRANTPR 38
CT++G+ LP+ + F FL+G L A + ++ + PR
Sbjct: 582 CTSKGLVLPAVLGITFGAFLIGALLTAALWYIYSHTREYPR 622
>BX248133-9|CAM26111.1| 891|Homo sapiens chromosome 6 open reading
frame 27 protein.
Length = 891
Score = 28.7 bits (61), Expect = 9.7
Identities = 20/67 (29%), Positives = 25/67 (37%)
Frame = -3
Query: 384 LTPGMSPTAWPLRPNPATHTSSFSSMWLRQPSRGTNAVTFLPFLMSCTRTHLRMAEFGCL 205
LT G T P P +H F + P G N + P HL+ A+ L
Sbjct: 227 LTSGYFGTHPPKPPGKCSHGGHFDRSSSQPPRGGINKDSTSPGFSPHHMLHLQAAKLALL 286
Query: 204 ASTPTFS 184
AS FS
Sbjct: 287 ASIQAFS 293
>BA000025-13|BAB63304.1| 852|Homo sapiens G7C protein.
Length = 852
Score = 28.7 bits (61), Expect = 9.7
Identities = 20/67 (29%), Positives = 25/67 (37%)
Frame = -3
Query: 384 LTPGMSPTAWPLRPNPATHTSSFSSMWLRQPSRGTNAVTFLPFLMSCTRTHLRMAEFGCL 205
LT G T P P +H F + P G N + P HL+ A+ L
Sbjct: 227 LTSGYFGTHPPKPPGKCSHGGHFDRSSSQPPRGGINKDSTSPGFSPHHMLHLQAAKLALL 286
Query: 204 ASTPTFS 184
AS FS
Sbjct: 287 ASIQAFS 293
>AL662899-45|CAI18431.2| 891|Homo sapiens chromosome 6 open reading
frame 27 protein.
Length = 891
Score = 28.7 bits (61), Expect = 9.7
Identities = 20/67 (29%), Positives = 25/67 (37%)
Frame = -3
Query: 384 LTPGMSPTAWPLRPNPATHTSSFSSMWLRQPSRGTNAVTFLPFLMSCTRTHLRMAEFGCL 205
LT G T P P +H F + P G N + P HL+ A+ L
Sbjct: 227 LTSGYFGTHPPKPPGKCSHGGHFDRSSSQPPRGGINKDSTSPGFSPHHMLHLQAAKLALL 286
Query: 204 ASTPTFS 184
AS FS
Sbjct: 287 ASIQAFS 293
>AL662834-10|CAI17731.2| 891|Homo sapiens chromosome 6 open reading
frame 27 protein.
Length = 891
Score = 28.7 bits (61), Expect = 9.7
Identities = 20/67 (29%), Positives = 25/67 (37%)
Frame = -3
Query: 384 LTPGMSPTAWPLRPNPATHTSSFSSMWLRQPSRGTNAVTFLPFLMSCTRTHLRMAEFGCL 205
LT G T P P +H F + P G N + P HL+ A+ L
Sbjct: 227 LTSGYFGTHPPKPPGKCSHGGHFDRSSSQPPRGGINKDSTSPGFSPHHMLHLQAAKLALL 286
Query: 204 ASTPTFS 184
AS FS
Sbjct: 287 ASIQAFS 293
>AF134726-11|AAD21820.1| 852|Homo sapiens NG37 protein.
Length = 852
Score = 28.7 bits (61), Expect = 9.7
Identities = 20/67 (29%), Positives = 25/67 (37%)
Frame = -3
Query: 384 LTPGMSPTAWPLRPNPATHTSSFSSMWLRQPSRGTNAVTFLPFLMSCTRTHLRMAEFGCL 205
LT G T P P +H F + P G N + P HL+ A+ L
Sbjct: 227 LTSGYFGTHPPKPPGKCSHGGHFDRSSSQPPRGGINKDSTSPGFSPHHMLHLQAAKLALL 286
Query: 204 ASTPTFS 184
AS FS
Sbjct: 287 ASIQAFS 293
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 72,404,554
Number of Sequences: 237096
Number of extensions: 1636803
Number of successful extensions: 4246
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 4035
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4229
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 3701294870
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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