Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0022_F06
(449 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 23 1.2
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 23 1.2
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 23 1.5
AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex det... 23 1.5
AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9 methylt... 22 3.6
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ... 22 3.6
DQ244074-1|ABB36784.1| 517|Apis mellifera cytochrome P450 monoo... 21 6.2
AY336529-1|AAQ02340.1| 712|Apis mellifera transferrin protein. 21 6.2
AY336528-1|AAQ02339.1| 712|Apis mellifera transferrin protein. 21 6.2
AY217097-1|AAO39761.1| 712|Apis mellifera transferrin protein. 21 6.2
DQ244075-1|ABB36785.1| 548|Apis mellifera cytochrome P450 monoo... 21 8.2
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso... 21 8.2
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 23.4 bits (48), Expect = 1.2
Identities = 8/11 (72%), Positives = 9/11 (81%)
Frame = +2
Query: 353 GHAVGDIPGVR 385
GH V D+PGVR
Sbjct: 69 GHPVNDVPGVR 79
Score = 20.6 bits (41), Expect = 8.2
Identities = 6/10 (60%), Positives = 8/10 (80%)
Frame = +3
Query: 120 TWVRDGRRTP 149
TW +DGR+ P
Sbjct: 366 TWYKDGRQLP 375
Score = 20.6 bits (41), Expect = 8.2
Identities = 10/29 (34%), Positives = 13/29 (44%)
Frame = -3
Query: 417 SDTFATLTTLNLTPGMSPTAWPLRPNPAT 331
S ++ T PG+ P A L PN T
Sbjct: 1486 SSPVLSVRTQGQAPGIPPAATFLSPNSTT 1514
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 23.4 bits (48), Expect = 1.2
Identities = 8/11 (72%), Positives = 9/11 (81%)
Frame = +2
Query: 353 GHAVGDIPGVR 385
GH V D+PGVR
Sbjct: 69 GHPVNDVPGVR 79
Score = 20.6 bits (41), Expect = 8.2
Identities = 6/10 (60%), Positives = 8/10 (80%)
Frame = +3
Query: 120 TWVRDGRRTP 149
TW +DGR+ P
Sbjct: 366 TWYKDGRQLP 375
Score = 20.6 bits (41), Expect = 8.2
Identities = 10/29 (34%), Positives = 13/29 (44%)
Frame = -3
Query: 417 SDTFATLTTLNLTPGMSPTAWPLRPNPAT 331
S ++ T PG+ P A L PN T
Sbjct: 1482 SSPVLSVRTQGQAPGIPPAATFLSPNSTT 1510
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 23.0 bits (47), Expect = 1.5
Identities = 8/11 (72%), Positives = 10/11 (90%)
Frame = +2
Query: 353 GHAVGDIPGVR 385
G AVGD+PG+R
Sbjct: 42 GSAVGDVPGLR 52
>AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex
determiner protein.
Length = 418
Score = 23.0 bits (47), Expect = 1.5
Identities = 18/66 (27%), Positives = 33/66 (50%), Gaps = 6/66 (9%)
Frame = +2
Query: 50 RTARKHVNHRRE----QRWADKEFKKAH--MGTRWKANPFGGASHAKGIVLEKVGVEAKQ 211
RT + + +RRE Q+ ++E++K M ++ +H K +VLE+ ++K
Sbjct: 30 RTKEERLQYRREAWLVQQEREQEYEKLKRKMILEYELYIKYSHTHEKKLVLERSKTKSKS 89
Query: 212 PNSAIR 229
P S R
Sbjct: 90 PESRDR 95
>AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9
methyltransferase protein.
Length = 683
Score = 21.8 bits (44), Expect = 3.6
Identities = 8/24 (33%), Positives = 12/24 (50%)
Frame = -3
Query: 72 FTCLRAVRIPRGLPITIARTRSSC 1
+T +R+P G PI R +C
Sbjct: 457 YTLKHKIRVPPGTPIYECNKRCNC 480
>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
protein.
Length = 1124
Score = 21.8 bits (44), Expect = 3.6
Identities = 7/9 (77%), Positives = 9/9 (100%)
Frame = +2
Query: 212 PNSAIRKCV 238
PNSA+RKC+
Sbjct: 584 PNSAVRKCM 592
>DQ244074-1|ABB36784.1| 517|Apis mellifera cytochrome P450
monooxygenase protein.
Length = 517
Score = 21.0 bits (42), Expect = 6.2
Identities = 11/40 (27%), Positives = 19/40 (47%)
Frame = +1
Query: 58 AQARESSSRAAMGRQGIQKSPHGYEMEGEPLRWCISC*GH 177
A + E+S+ A + + K P + + RW SC G+
Sbjct: 34 ATSHEASAPAEGKFKTVSKVPGPFSLPIFGTRWIFSCIGY 73
>AY336529-1|AAQ02340.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 21.0 bits (42), Expect = 6.2
Identities = 10/16 (62%), Positives = 10/16 (62%), Gaps = 2/16 (12%)
Frame = -1
Query: 71 SRACAPCEYPEV--YP 30
S CA CE PEV YP
Sbjct: 216 SNMCALCEKPEVCDYP 231
>AY336528-1|AAQ02339.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 21.0 bits (42), Expect = 6.2
Identities = 10/16 (62%), Positives = 10/16 (62%), Gaps = 2/16 (12%)
Frame = -1
Query: 71 SRACAPCEYPEV--YP 30
S CA CE PEV YP
Sbjct: 216 SNMCALCEKPEVCDYP 231
>AY217097-1|AAO39761.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 21.0 bits (42), Expect = 6.2
Identities = 10/16 (62%), Positives = 10/16 (62%), Gaps = 2/16 (12%)
Frame = -1
Query: 71 SRACAPCEYPEV--YP 30
S CA CE PEV YP
Sbjct: 216 SNMCALCEKPEVCDYP 231
>DQ244075-1|ABB36785.1| 548|Apis mellifera cytochrome P450
monooxygenase protein.
Length = 548
Score = 20.6 bits (41), Expect = 8.2
Identities = 9/24 (37%), Positives = 16/24 (66%)
Frame = -2
Query: 388 KSDSRNVTNSVAFTTESCHSHLIV 317
KS RN+ ++ A TES ++++V
Sbjct: 267 KSGKRNIIDNSAQKTESKTNNIVV 290
>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
protein.
Length = 1770
Score = 20.6 bits (41), Expect = 8.2
Identities = 9/20 (45%), Positives = 10/20 (50%)
Frame = -2
Query: 379 SRNVTNSVAFTTESCHSHLI 320
S+NV V F T H H I
Sbjct: 973 SKNVQGRVGFVTPFEHRHFI 992
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 131,687
Number of Sequences: 438
Number of extensions: 2564
Number of successful extensions: 22
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 11820384
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)
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