Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0022_F05
         (380 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z69976-1|CAA93816.1|  204|Anopheles gambiae ribosomal protein RL...   165   6e-43
AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1 pr...    23   3.8  
AY578809-1|AAT07314.1|  358|Anopheles gambiae Sloan-Kettering In...    22   8.7  
AY578796-1|AAT07301.1|  437|Anopheles gambiae Gbb-60A protein.         22   8.7  

>Z69976-1|CAA93816.1|  204|Anopheles gambiae ribosomal protein RL10
           protein.
          Length = 204

 Score =  165 bits (400), Expect = 6e-43
 Identities = 77/114 (67%), Positives = 85/114 (74%)
 Frame = +1

Query: 37  MGAYRYIQELYRKKLSDVMRFLLRIRVWQYRQLTRMHRAPRPTRPDKARRLGYRAKQCYX 216
           MGAYRY+QELYRKK SDVMR+LLR+R WQYRQ+TR HRAPRP RP + RRLGY+AK  + 
Sbjct: 1   MGAYRYVQELYRKKQSDVMRYLLRVRAWQYRQMTRFHRAPRPWRPTRLRRLGYKAKTGFS 60

Query: 217 XXXXXXXXXXXXXPVPNGATYGKPKSHGVNQLKPTRNLQSIAEERVGRRCGGLR 378
                        PV  G TYGKPKSHGVNQLKP R LQS+AEERVG R GGLR
Sbjct: 61  IFRIRVRCGGRKRPVHKGCTYGKPKSHGVNQLKPYRCLQSVAEERVGGRLGGLR 114


>AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1
           precursor protein.
          Length = 1623

 Score = 23.0 bits (47), Expect = 3.8
 Identities = 10/22 (45%), Positives = 12/22 (54%)
 Frame = +3

Query: 24  QTRQDGRVQIYTGVV*EKVERC 89
           Q   +GR Q   GV  EK +RC
Sbjct: 408 QCNAEGRCQCKPGVTGEKCDRC 429


>AY578809-1|AAT07314.1|  358|Anopheles gambiae Sloan-Kettering
           Institute proto-oncogeneproduct protein.
          Length = 358

 Score = 21.8 bits (44), Expect = 8.7
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = +1

Query: 13  RVYHRLVKMGAYRYIQELY 69
           RVYHR    G   ++ ELY
Sbjct: 229 RVYHRCFGRGEGLFLPELY 247


>AY578796-1|AAT07301.1|  437|Anopheles gambiae Gbb-60A protein.
          Length = 437

 Score = 21.8 bits (44), Expect = 8.7
 Identities = 9/19 (47%), Positives = 14/19 (73%)
 Frame = -3

Query: 72  PIQLLYISVRAHLDESVID 16
           P +L+ ISV  H+DES ++
Sbjct: 404 PTKLIPISVLYHIDESNVN 422


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 422,459
Number of Sequences: 2352
Number of extensions: 7533
Number of successful extensions: 39
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 39
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 29074284
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)