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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0022_F04
         (260 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    22   0.95 
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    21   1.7  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   2.2  
DQ855504-1|ABH88191.1|  124|Tribolium castaneum chemosensory pro...    21   2.9  
AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain tran...    21   2.9  
AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia or...    21   2.9  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    20   3.8  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      20   5.0  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      20   5.0  
AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory recept...    20   5.0  
AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase prot...    19   8.8  

>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 22.2 bits (45), Expect = 0.95
 Identities = 10/32 (31%), Positives = 13/32 (40%)
 Frame = +3

Query: 45  PWXFIGKKYKMTTSENFERFHEGTRCGTDHPQ 140
           P+  + K     T    E FH   +C  D PQ
Sbjct: 241 PFESLKKSLNFRTPSCLETFHTLEKCRPDPPQ 272


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 21.4 bits (43), Expect = 1.7
 Identities = 8/19 (42%), Positives = 10/19 (52%)
 Frame = +1

Query: 163 TVELRKEGDEYNFVTSSTF 219
           T+ +RK G  YNF     F
Sbjct: 39  TINIRKNGLNYNFTKKCYF 57


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 21.0 bits (42), Expect = 2.2
 Identities = 8/13 (61%), Positives = 11/13 (84%)
 Frame = +1

Query: 154 VTPTVELRKEGDE 192
           V PT+ELR+E D+
Sbjct: 783 VVPTMELRREFDK 795



 Score = 20.2 bits (40), Expect = 3.8
 Identities = 7/13 (53%), Positives = 11/13 (84%)
 Frame = +1

Query: 88   RTSSDFMKALGVG 126
            R  S+F+KA+G+G
Sbjct: 2146 RHKSEFIKAMGLG 2158


>DQ855504-1|ABH88191.1|  124|Tribolium castaneum chemosensory
          protein 18 protein.
          Length = 124

 Score = 20.6 bits (41), Expect = 2.9
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = -1

Query: 92 VLGCGHLVFLTDEV 51
          VL C H+VFL + V
Sbjct: 8  VLTCAHVVFLEEYV 21


>AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain
           transcription factor Maxillopediaprotein.
          Length = 523

 Score = 20.6 bits (41), Expect = 2.9
 Identities = 10/39 (25%), Positives = 18/39 (46%)
 Frame = +1

Query: 94  SSDFMKALGVGLITRKAANAVTPTVELRKEGDEYNFVTS 210
           SSD   +      +  + N V PT E      ++NF+++
Sbjct: 473 SSDNYNSFHQFYSSESSQNQVAPTGENSNSSSDFNFLSN 511



 Score = 19.0 bits (37), Expect = 8.8
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = -1

Query: 260 SNSSPGLNFISVVLN 216
           SNSS   NF+S + N
Sbjct: 500 SNSSSDFNFLSNLAN 514


>AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 471

 Score = 20.6 bits (41), Expect = 2.9
 Identities = 10/39 (25%), Positives = 18/39 (46%)
 Frame = +1

Query: 94  SSDFMKALGVGLITRKAANAVTPTVELRKEGDEYNFVTS 210
           SSD   +      +  + N V PT E      ++NF+++
Sbjct: 421 SSDNYNSFHQFYSSESSQNQVAPTGENSNSSSDFNFLSN 459



 Score = 19.0 bits (37), Expect = 8.8
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = -1

Query: 260 SNSSPGLNFISVVLN 216
           SNSS   NF+S + N
Sbjct: 448 SNSSSDFNFLSNLAN 462


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 20.2 bits (40), Expect = 3.8
 Identities = 7/23 (30%), Positives = 13/23 (56%)
 Frame = -1

Query: 119 PSAFMKSLEVLGCGHLVFLTDEV 51
           P+ + + L   G  H++ L DE+
Sbjct: 509 PNTYNRFLAATGGDHVISLIDEI 531


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 19.8 bits (39), Expect = 5.0
 Identities = 11/43 (25%), Positives = 20/43 (46%)
 Frame = -1

Query: 218 NVEEVTKLYSSPSLRSSTVGVTALAALRVISPTPSAFMKSLEV 90
           + E + +  SSP   S    +T+   + + SP+ S    S+ V
Sbjct: 673 DAESLNQSISSPGALSGLSSLTSPGGMVLPSPSTSVASPSVSV 715


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 19.8 bits (39), Expect = 5.0
 Identities = 11/43 (25%), Positives = 20/43 (46%)
 Frame = -1

Query: 218 NVEEVTKLYSSPSLRSSTVGVTALAALRVISPTPSAFMKSLEV 90
           + E + +  SSP   S    +T+   + + SP+ S    S+ V
Sbjct: 565 DAESLNQSISSPGALSGLSSLTSPGGMVLPSPSTSVASPSVSV 607


>AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory receptor
           candidate 20 protein.
          Length = 393

 Score = 19.8 bits (39), Expect = 5.0
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = -1

Query: 98  LEVLGCGHLVFLTDEVPW 45
           +EV   G+L F+  +V W
Sbjct: 291 IEVCNAGYLPFILLQVAW 308


>AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase
           protein.
          Length = 590

 Score = 19.0 bits (37), Expect = 8.8
 Identities = 7/20 (35%), Positives = 13/20 (65%)
 Frame = +2

Query: 68  IQDDHIRELRAIS*RHSVWD 127
           ++D  +  LRA++ +HS  D
Sbjct: 106 VRDKAVESLRAVAQQHSPAD 125


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 59,424
Number of Sequences: 336
Number of extensions: 1159
Number of successful extensions: 14
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 47
effective length of database: 106,793
effective search space used:  4164927
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 37 (19.9 bits)

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