Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0022_F04
(260 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT001880-1|AAN71654.1| 142|Drosophila melanogaster SD12036p pro... 69 9e-13
BT001835-1|AAN71590.1| 130|Drosophila melanogaster RH49003p pro... 69 9e-13
BT001757-1|AAN71512.1| 130|Drosophila melanogaster RH06221p pro... 69 9e-13
AE014297-1319|AAN13512.1| 130|Drosophila melanogaster CG6783-PB... 69 9e-13
AE014297-1318|AAN13511.1| 157|Drosophila melanogaster CG6783-PC... 69 9e-13
BT012432-1|AAS93703.1| 117|Drosophila melanogaster RH70437p pro... 62 1e-10
BT003449-1|AAO39452.1| 117|Drosophila melanogaster RH46282p pro... 62 1e-10
AE014297-1320|AAF54655.2| 117|Drosophila melanogaster CG6783-PA... 62 1e-10
BT003482-1|AAO39485.1| 537|Drosophila melanogaster RE55639p pro... 27 4.8
AE014298-978|AAF46222.2| 537|Drosophila melanogaster CG32732-PA... 27 4.8
BT010283-1|AAQ23601.1| 226|Drosophila melanogaster RE04467p pro... 26 6.3
AY058438-1|AAL13667.1| 778|Drosophila melanogaster GH21672p pro... 26 6.3
AE014298-2431|AAF48630.2| 226|Drosophila melanogaster CG9782-PA... 26 6.3
AE014297-1010|AAF54429.1| 778|Drosophila melanogaster CG9448-PA... 26 6.3
BT014632-1|AAT27256.1| 2112|Drosophila melanogaster SD12316p pro... 26 8.3
AY069626-1|AAL39771.1| 497|Drosophila melanogaster LD39604p pro... 26 8.3
AJ010073-1|CAB45234.1| 614|Drosophila melanogaster XRCC1 protei... 26 8.3
AF132142-1|AAD33589.1| 614|Drosophila melanogaster DNA repair p... 26 8.3
AE014298-3031|AAF50897.2| 2181|Drosophila melanogaster CG1412-PA... 26 8.3
AE014298-727|AAF46025.1| 614|Drosophila melanogaster CG4208-PA ... 26 8.3
AE014134-808|AAF50957.4| 1286|Drosophila melanogaster CG3047-PA ... 26 8.3
AE013599-3676|AAF47053.2| 497|Drosophila melanogaster CG11299-P... 26 8.3
>BT001880-1|AAN71654.1| 142|Drosophila melanogaster SD12036p
protein.
Length = 142
Score = 68.9 bits (161), Expect = 9e-13
Identities = 30/53 (56%), Positives = 40/53 (75%)
Frame = +1
Query: 100 DFMKALGVGLITRKAANAVTPTVELRKEGDEYNFVTSSTFKTTEMKFKPGEEF 258
++MK LGVGL+TRK N+++PTVE+ EGD Y T+STFKT+ + FK G EF
Sbjct: 30 EYMKELGVGLVTRKMGNSLSPTVEVTLEGDTYTLTTTSTFKTSAISFKLGVEF 82
Score = 29.5 bits (63), Expect = 0.68
Identities = 10/17 (58%), Positives = 14/17 (82%)
Frame = +3
Query: 54 FIGKKYKMTTSENFERF 104
F+GKKYK+ SENF+ +
Sbjct: 15 FVGKKYKLDKSENFDEY 31
>BT001835-1|AAN71590.1| 130|Drosophila melanogaster RH49003p
protein.
Length = 130
Score = 68.9 bits (161), Expect = 9e-13
Identities = 30/53 (56%), Positives = 40/53 (75%)
Frame = +1
Query: 100 DFMKALGVGLITRKAANAVTPTVELRKEGDEYNFVTSSTFKTTEMKFKPGEEF 258
++MK LGVGL+TRK N+++PTVE+ EGD Y T+STFKT+ + FK G EF
Sbjct: 18 EYMKELGVGLVTRKMGNSLSPTVEVTLEGDTYTLTTTSTFKTSAISFKLGVEF 70
Score = 29.5 bits (63), Expect = 0.68
Identities = 10/17 (58%), Positives = 14/17 (82%)
Frame = +3
Query: 54 FIGKKYKMTTSENFERF 104
F+GKKYK+ SENF+ +
Sbjct: 3 FVGKKYKLDKSENFDEY 19
>BT001757-1|AAN71512.1| 130|Drosophila melanogaster RH06221p
protein.
Length = 130
Score = 68.9 bits (161), Expect = 9e-13
Identities = 30/53 (56%), Positives = 40/53 (75%)
Frame = +1
Query: 100 DFMKALGVGLITRKAANAVTPTVELRKEGDEYNFVTSSTFKTTEMKFKPGEEF 258
++MK LGVGL+TRK N+++PTVE+ EGD Y T+STFKT+ + FK G EF
Sbjct: 18 EYMKELGVGLVTRKMGNSLSPTVEVTLEGDTYTLTTTSTFKTSAISFKLGVEF 70
Score = 29.5 bits (63), Expect = 0.68
Identities = 10/17 (58%), Positives = 14/17 (82%)
Frame = +3
Query: 54 FIGKKYKMTTSENFERF 104
F+GKKYK+ SENF+ +
Sbjct: 3 FVGKKYKLDKSENFDEY 19
>AE014297-1319|AAN13512.1| 130|Drosophila melanogaster CG6783-PB,
isoform B protein.
Length = 130
Score = 68.9 bits (161), Expect = 9e-13
Identities = 30/53 (56%), Positives = 40/53 (75%)
Frame = +1
Query: 100 DFMKALGVGLITRKAANAVTPTVELRKEGDEYNFVTSSTFKTTEMKFKPGEEF 258
++MK LGVGL+TRK N+++PTVE+ EGD Y T+STFKT+ + FK G EF
Sbjct: 18 EYMKELGVGLVTRKMGNSLSPTVEVTLEGDTYTLTTTSTFKTSAISFKLGVEF 70
Score = 29.5 bits (63), Expect = 0.68
Identities = 10/17 (58%), Positives = 14/17 (82%)
Frame = +3
Query: 54 FIGKKYKMTTSENFERF 104
F+GKKYK+ SENF+ +
Sbjct: 3 FVGKKYKLDKSENFDEY 19
>AE014297-1318|AAN13511.1| 157|Drosophila melanogaster CG6783-PC,
isoform C protein.
Length = 157
Score = 68.9 bits (161), Expect = 9e-13
Identities = 30/53 (56%), Positives = 40/53 (75%)
Frame = +1
Query: 100 DFMKALGVGLITRKAANAVTPTVELRKEGDEYNFVTSSTFKTTEMKFKPGEEF 258
++MK LGVGL+TRK N+++PTVE+ EGD Y T+STFKT+ + FK G EF
Sbjct: 18 EYMKELGVGLVTRKMGNSLSPTVEVTLEGDTYTLTTTSTFKTSAISFKLGVEF 70
Score = 29.5 bits (63), Expect = 0.68
Identities = 10/17 (58%), Positives = 14/17 (82%)
Frame = +3
Query: 54 FIGKKYKMTTSENFERF 104
F+GKKYK+ SENF+ +
Sbjct: 3 FVGKKYKLDKSENFDEY 19
>BT012432-1|AAS93703.1| 117|Drosophila melanogaster RH70437p
protein.
Length = 117
Score = 62.1 bits (144), Expect = 1e-10
Identities = 27/49 (55%), Positives = 36/49 (73%)
Frame = +1
Query: 112 ALGVGLITRKAANAVTPTVELRKEGDEYNFVTSSTFKTTEMKFKPGEEF 258
+ GVGL+TRK N+++PTVE+ EGD Y T+STFKT+ + FK G EF
Sbjct: 9 SFGVGLVTRKMGNSLSPTVEVTLEGDTYTLTTTSTFKTSAISFKLGVEF 57
>BT003449-1|AAO39452.1| 117|Drosophila melanogaster RH46282p
protein.
Length = 117
Score = 62.1 bits (144), Expect = 1e-10
Identities = 27/49 (55%), Positives = 36/49 (73%)
Frame = +1
Query: 112 ALGVGLITRKAANAVTPTVELRKEGDEYNFVTSSTFKTTEMKFKPGEEF 258
+ GVGL+TRK N+++PTVE+ EGD Y T+STFKT+ + FK G EF
Sbjct: 9 SFGVGLVTRKMGNSLSPTVEVTLEGDTYTLTTTSTFKTSAISFKLGVEF 57
>AE014297-1320|AAF54655.2| 117|Drosophila melanogaster CG6783-PA,
isoform A protein.
Length = 117
Score = 62.1 bits (144), Expect = 1e-10
Identities = 27/49 (55%), Positives = 36/49 (73%)
Frame = +1
Query: 112 ALGVGLITRKAANAVTPTVELRKEGDEYNFVTSSTFKTTEMKFKPGEEF 258
+ GVGL+TRK N+++PTVE+ EGD Y T+STFKT+ + FK G EF
Sbjct: 9 SFGVGLVTRKMGNSLSPTVEVTLEGDTYTLTTTSTFKTSAISFKLGVEF 57
>BT003482-1|AAO39485.1| 537|Drosophila melanogaster RE55639p
protein.
Length = 537
Score = 26.6 bits (56), Expect = 4.8
Identities = 14/39 (35%), Positives = 17/39 (43%)
Frame = -3
Query: 195 VFVTFLAQLHGWGHSISRLAGDQSHTECLHEIARSSRMW 79
VF QL W + R AGD H +C E +R W
Sbjct: 437 VFKMSAEQLDHWCSDLDR-AGDLLHIDCALETDHETRTW 474
>AE014298-978|AAF46222.2| 537|Drosophila melanogaster CG32732-PA
protein.
Length = 537
Score = 26.6 bits (56), Expect = 4.8
Identities = 14/39 (35%), Positives = 17/39 (43%)
Frame = -3
Query: 195 VFVTFLAQLHGWGHSISRLAGDQSHTECLHEIARSSRMW 79
VF QL W + R AGD H +C E +R W
Sbjct: 437 VFKMSAEQLDHWCSDLDR-AGDLLHIDCALETDHETRTW 474
>BT010283-1|AAQ23601.1| 226|Drosophila melanogaster RE04467p
protein.
Length = 226
Score = 26.2 bits (55), Expect = 6.3
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = +1
Query: 178 KEGDEYNFVTSSTFKTTEMKFKPG 249
+EGDE +F +S+T TTE K G
Sbjct: 81 EEGDEASFASSTTTTTTEAPKKVG 104
>AY058438-1|AAL13667.1| 778|Drosophila melanogaster GH21672p
protein.
Length = 778
Score = 26.2 bits (55), Expect = 6.3
Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Frame = -1
Query: 212 EEVTKLYSSPSLRSSTVGVTALAA-LRVISPTPSAFMKSLEVLGCGHLVFLTDEVPW 45
E++ +L SP+ S TV A A + V+SPTPS+ SL+ + D W
Sbjct: 39 EDIFRL--SPAQESCTVAEEAAAVEVAVMSPTPSSTCYSLQPQSQARQSNVADSEKW 93
>AE014298-2431|AAF48630.2| 226|Drosophila melanogaster CG9782-PA
protein.
Length = 226
Score = 26.2 bits (55), Expect = 6.3
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = +1
Query: 178 KEGDEYNFVTSSTFKTTEMKFKPG 249
+EGDE +F +S+T TTE K G
Sbjct: 81 EEGDEASFASSTTTTTTEAPKKVG 104
>AE014297-1010|AAF54429.1| 778|Drosophila melanogaster CG9448-PA
protein.
Length = 778
Score = 26.2 bits (55), Expect = 6.3
Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Frame = -1
Query: 212 EEVTKLYSSPSLRSSTVGVTALAA-LRVISPTPSAFMKSLEVLGCGHLVFLTDEVPW 45
E++ +L SP+ S TV A A + V+SPTPS+ SL+ + D W
Sbjct: 39 EDIFRL--SPAQESCTVAEEAAAVEVAVMSPTPSSTCYSLQPQSQARQSNVADSEKW 93
>BT014632-1|AAT27256.1| 2112|Drosophila melanogaster SD12316p
protein.
Length = 2112
Score = 25.8 bits (54), Expect = 8.3
Identities = 20/61 (32%), Positives = 29/61 (47%), Gaps = 3/61 (4%)
Frame = -1
Query: 260 SNSSPGLNFISVVLN-VEEVTKLYSSPSLRSSTVGVTALAALRVISPT--PSAFMKSLEV 90
S S+ SV N +E + S S SS+VGV + L SPT P +K++E
Sbjct: 91 SGSATAATAASVSTNWPQEASSAAGSNSGSSSSVGVAGITGLEPTSPTSLPPYQVKAMET 150
Query: 89 L 87
+
Sbjct: 151 I 151
>AY069626-1|AAL39771.1| 497|Drosophila melanogaster LD39604p
protein.
Length = 497
Score = 25.8 bits (54), Expect = 8.3
Identities = 16/36 (44%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = -1
Query: 191 SSPSLRSSTVGVTALAALRVISPT-PSAFMKSLEVL 87
SSP L+S V ALA +I+PT P+ K VL
Sbjct: 184 SSPKLKSPPAAVAALAPTILITPTSPTEPQKGKPVL 219
>AJ010073-1|CAB45234.1| 614|Drosophila melanogaster XRCC1 protein
protein.
Length = 614
Score = 25.8 bits (54), Expect = 8.3
Identities = 15/35 (42%), Positives = 22/35 (62%)
Frame = -1
Query: 221 LNVEEVTKLYSSPSLRSSTVGVTALAALRVISPTP 117
L+ +V+ L +SP ++ST L ALR +SPTP
Sbjct: 223 LSAGKVSSLAASP--KTSTSPSPVLNALRSVSPTP 255
>AF132142-1|AAD33589.1| 614|Drosophila melanogaster DNA repair
protein XRCC1 protein.
Length = 614
Score = 25.8 bits (54), Expect = 8.3
Identities = 15/35 (42%), Positives = 22/35 (62%)
Frame = -1
Query: 221 LNVEEVTKLYSSPSLRSSTVGVTALAALRVISPTP 117
L+ +V+ L +SP ++ST L ALR +SPTP
Sbjct: 223 LSAGKVSSLAASP--KTSTSPSPVLNALRSVSPTP 255
>AE014298-3031|AAF50897.2| 2181|Drosophila melanogaster CG1412-PA
protein.
Length = 2181
Score = 25.8 bits (54), Expect = 8.3
Identities = 20/61 (32%), Positives = 29/61 (47%), Gaps = 3/61 (4%)
Frame = -1
Query: 260 SNSSPGLNFISVVLN-VEEVTKLYSSPSLRSSTVGVTALAALRVISPT--PSAFMKSLEV 90
S S+ SV N +E + S S SS+VGV + L SPT P +K++E
Sbjct: 91 SGSATAATAASVSTNWPQEASSAAGSNSGSSSSVGVAGITGLEPTSPTSLPPYQVKAMET 150
Query: 89 L 87
+
Sbjct: 151 I 151
>AE014298-727|AAF46025.1| 614|Drosophila melanogaster CG4208-PA
protein.
Length = 614
Score = 25.8 bits (54), Expect = 8.3
Identities = 15/35 (42%), Positives = 22/35 (62%)
Frame = -1
Query: 221 LNVEEVTKLYSSPSLRSSTVGVTALAALRVISPTP 117
L+ +V+ L +SP ++ST L ALR +SPTP
Sbjct: 223 LSAGKVSSLAASP--KTSTSPSPVLNALRSVSPTP 255
>AE014134-808|AAF50957.4| 1286|Drosophila melanogaster CG3047-PA
protein.
Length = 1286
Score = 25.8 bits (54), Expect = 8.3
Identities = 13/44 (29%), Positives = 21/44 (47%)
Frame = -1
Query: 212 EEVTKLYSSPSLRSSTVGVTALAALRVISPTPSAFMKSLEVLGC 81
E T + SSP + +STV T+ +PTP+ + + C
Sbjct: 172 ESSTAIPSSPCIDTSTVIPTSPCTQETTTPTPTCSTQGTQTTPC 215
>AE013599-3676|AAF47053.2| 497|Drosophila melanogaster CG11299-PA
protein.
Length = 497
Score = 25.8 bits (54), Expect = 8.3
Identities = 16/36 (44%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = -1
Query: 191 SSPSLRSSTVGVTALAALRVISPT-PSAFMKSLEVL 87
SSP L+S V ALA +I+PT P+ K VL
Sbjct: 184 SSPKLKSPPAAVAALAPTILITPTSPTEPQKGKPVL 219
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,523,527
Number of Sequences: 53049
Number of extensions: 218869
Number of successful extensions: 481
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 469
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 481
length of database: 24,988,368
effective HSP length: 65
effective length of database: 21,540,183
effective search space used: 452343843
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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