Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0022_F04
(260 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81127-2|CAB03387.1| 137|Caenorhabditis elegans Hypothetical pr... 65 7e-12
AF003141-3|AAK21484.1| 135|Caenorhabditis elegans Lipid binding... 61 9e-11
Z81127-7|CAB03391.2| 137|Caenorhabditis elegans Hypothetical pr... 58 9e-10
AF003141-5|AAK21486.1| 136|Caenorhabditis elegans Lipid binding... 54 2e-08
AC024771-9|ABA61863.1| 137|Caenorhabditis elegans Lipid binding... 40 2e-04
AC024771-8|AAK70656.1| 152|Caenorhabditis elegans Lipid binding... 40 2e-04
U80438-5|AAB37636.1| 1217|Caenorhabditis elegans Nuclear pore co... 26 3.2
Z92804-2|CAB07253.2| 321|Caenorhabditis elegans Hypothetical pr... 26 4.2
Z81540-5|CAB04405.2| 946|Caenorhabditis elegans Hypothetical pr... 26 4.2
Z68749-3|CAA92958.1| 288|Caenorhabditis elegans Hypothetical pr... 26 4.2
Z68343-4|CAA92780.2| 298|Caenorhabditis elegans Hypothetical pr... 26 4.2
Z68342-11|CAA92777.2| 298|Caenorhabditis elegans Hypothetical p... 26 4.2
U80846-5|AAP82647.1| 825|Caenorhabditis elegans Hypothetical pr... 26 4.2
U80846-4|AAC70889.1| 1032|Caenorhabditis elegans Hypothetical pr... 26 4.2
U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical pr... 26 4.2
AF244356-1|AAF70462.1| 288|Caenorhabditis elegans long chain po... 26 4.2
Z22176-1|CAA80142.1| 724|Caenorhabditis elegans Hypothetical pr... 25 7.4
AC091125-4|AAK27888.1| 732|Caenorhabditis elegans Hypothetical ... 25 7.4
AC024831-2|AAN63422.1| 502|Caenorhabditis elegans Hypothetical ... 25 7.4
AC024831-1|AAN63421.1| 500|Caenorhabditis elegans Hypothetical ... 25 7.4
U61954-6|AAK29811.2| 459|Caenorhabditis elegans Sand endocytosi... 25 9.8
AF039710-8|AAB96686.2| 312|Caenorhabditis elegans Hypothetical ... 25 9.8
>Z81127-2|CAB03387.1| 137|Caenorhabditis elegans Hypothetical
protein T22G5.2 protein.
Length = 137
Score = 64.9 bits (151), Expect = 7e-12
Identities = 29/53 (54%), Positives = 40/53 (75%)
Frame = +1
Query: 100 DFMKALGVGLITRKAANAVTPTVELRKEGDEYNFVTSSTFKTTEMKFKPGEEF 258
++MK +GVGLITRKAA + P +E+R +G+ +NF STFK T++ FK GEEF
Sbjct: 21 EYMKEIGVGLITRKAAAHLKPILEIRLDGETWNFDQFSTFKNTKLSFKLGEEF 73
>AF003141-3|AAK21484.1| 135|Caenorhabditis elegans Lipid binding
protein protein 6 protein.
Length = 135
Score = 61.3 bits (142), Expect = 9e-11
Identities = 29/59 (49%), Positives = 39/59 (66%)
Frame = +1
Query: 82 HPRTSSDFMKALGVGLITRKAANAVTPTVELRKEGDEYNFVTSSTFKTTEMKFKPGEEF 258
H ++MK +GVGLITRKAA + PT+E++ EGD + STFK T + FK G+EF
Sbjct: 13 HSENFEEYMKEVGVGLITRKAAANLKPTLEIKVEGDLWYSNQYSTFKNTTLSFKLGQEF 71
>Z81127-7|CAB03391.2| 137|Caenorhabditis elegans Hypothetical
protein T22G5.6 protein.
Length = 137
Score = 58.0 bits (134), Expect = 9e-10
Identities = 24/59 (40%), Positives = 40/59 (67%)
Frame = +1
Query: 82 HPRTSSDFMKALGVGLITRKAANAVTPTVELRKEGDEYNFVTSSTFKTTEMKFKPGEEF 258
H +++K +GVGL+ RKAA+ +PT+E++ +GD ++F STFK ++ FK E+F
Sbjct: 15 HSENFEEYLKEIGVGLLIRKAASLTSPTLEIKLDGDTWHFNQYSTFKNNKLAFKIREKF 73
>AF003141-5|AAK21486.1| 136|Caenorhabditis elegans Lipid binding
protein protein 5 protein.
Length = 136
Score = 53.6 bits (123), Expect = 2e-08
Identities = 24/53 (45%), Positives = 37/53 (69%)
Frame = +1
Query: 100 DFMKALGVGLITRKAANAVTPTVELRKEGDEYNFVTSSTFKTTEMKFKPGEEF 258
D++K +GVGL+ RKAA A PT+E++ G++++ STFK T ++F G EF
Sbjct: 20 DYLKEVGVGLLLRKAACAAKPTLEIKVNGNKWHVNQLSTFKNTTLEFTLGVEF 72
>AC024771-9|ABA61863.1| 137|Caenorhabditis elegans Lipid binding
protein protein 9,isoform b protein.
Length = 137
Score = 40.3 bits (90), Expect = 2e-04
Identities = 18/50 (36%), Positives = 28/50 (56%)
Frame = +1
Query: 100 DFMKALGVGLITRKAANAVTPTVELRKEGDEYNFVTSSTFKTTEMKFKPG 249
+++K +GVG R A P +E GDE+ ++STFK +K+K G
Sbjct: 21 EYLKEVGVGWAIRTIATKTKPALEFAVNGDEWTMNSNSTFKNYTLKWKLG 70
>AC024771-8|AAK70656.1| 152|Caenorhabditis elegans Lipid binding
protein protein 9,isoform a protein.
Length = 152
Score = 40.3 bits (90), Expect = 2e-04
Identities = 18/50 (36%), Positives = 28/50 (56%)
Frame = +1
Query: 100 DFMKALGVGLITRKAANAVTPTVELRKEGDEYNFVTSSTFKTTEMKFKPG 249
+++K +GVG R A P +E GDE+ ++STFK +K+K G
Sbjct: 36 EYLKEVGVGWAIRTIATKTKPALEFAVNGDEWTMNSNSTFKNYTLKWKLG 85
>U80438-5|AAB37636.1| 1217|Caenorhabditis elegans Nuclear pore
complex protein protein7 protein.
Length = 1217
Score = 26.2 bits (55), Expect = 3.2
Identities = 19/52 (36%), Positives = 27/52 (51%)
Frame = -1
Query: 254 SSPGLNFISVVLNVEEVTKLYSSPSLRSSTVGVTALAALRVISPTPSAFMKS 99
+ PGL F S++ VT S +L SST + +A+ I+PT S F S
Sbjct: 840 AKPGL-FGSILDKETHVTTTPVSVALPSSTDSTQSKSAIPTIAPTMSLFGNS 890
>Z92804-2|CAB07253.2| 321|Caenorhabditis elegans Hypothetical
protein K05D4.3 protein.
Length = 321
Score = 25.8 bits (54), Expect = 4.2
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = -1
Query: 221 LNVEEVTKLYSSPSLRSSTVGVTALAALRVIS 126
L V KL+ P +SS VGV A +R+ S
Sbjct: 286 LKSRNVFKLFCCPFSKSSQVGVVAQPVMRIYS 317
>Z81540-5|CAB04405.2| 946|Caenorhabditis elegans Hypothetical
protein F46B3.5 protein.
Length = 946
Score = 25.8 bits (54), Expect = 4.2
Identities = 10/26 (38%), Positives = 13/26 (50%)
Frame = +3
Query: 96 ERFHEGTRCGTDHPQGG*CCDPNRGA 173
ER+ +GT C + G CCD A
Sbjct: 263 ERYPKGTHCESGKRDGNKCCDARLAA 288
>Z68749-3|CAA92958.1| 288|Caenorhabditis elegans Hypothetical
protein F56H11.4 protein.
Length = 288
Score = 25.8 bits (54), Expect = 4.2
Identities = 20/66 (30%), Positives = 29/66 (43%), Gaps = 1/66 (1%)
Frame = -1
Query: 251 SPGLNFISVVLNVEEVTKLYSSPSLRSSTVGVTALAALRVISPTPSAFMKSLEVLG-CGH 75
+PG N + LN +YS LRS + V A + S F+ S VL G+
Sbjct: 173 TPGFNRYGIYLNFVVHAFMYSYYFLRSMKIRVPGFIAQAITSLQIVQFIISCAVLAHLGY 232
Query: 74 LVFLTD 57
L+ T+
Sbjct: 233 LMHFTN 238
>Z68343-4|CAA92780.2| 298|Caenorhabditis elegans Hypothetical
protein F38E11.9 protein.
Length = 298
Score = 25.8 bits (54), Expect = 4.2
Identities = 13/50 (26%), Positives = 20/50 (40%)
Frame = +3
Query: 60 GKKYKMTTSENFERFHEGTRCGTDHPQGG*CCDPNRGAAQGR*RIQFRHL 209
G + + SENF+ F + + HP G P R Q + H+
Sbjct: 124 GLPFSLMASENFQNFLKNVCLKSGHPDVGNITFPTRETIQNYICADYEHI 173
>Z68342-11|CAA92777.2| 298|Caenorhabditis elegans Hypothetical
protein F38E11.9 protein.
Length = 298
Score = 25.8 bits (54), Expect = 4.2
Identities = 13/50 (26%), Positives = 20/50 (40%)
Frame = +3
Query: 60 GKKYKMTTSENFERFHEGTRCGTDHPQGG*CCDPNRGAAQGR*RIQFRHL 209
G + + SENF+ F + + HP G P R Q + H+
Sbjct: 124 GLPFSLMASENFQNFLKNVCLKSGHPDVGNITFPTRETIQNYICADYEHI 173
>U80846-5|AAP82647.1| 825|Caenorhabditis elegans Hypothetical
protein K06A9.1c protein.
Length = 825
Score = 25.8 bits (54), Expect = 4.2
Identities = 21/56 (37%), Positives = 28/56 (50%)
Frame = -1
Query: 260 SNSSPGLNFISVVLNVEEVTKLYSSPSLRSSTVGVTALAALRVISPTPSAFMKSLE 93
+NSSP + +S + ++ L S PS SST A + L SP PS SLE
Sbjct: 473 TNSSPSPSSLSP--STSGMSTLTSEPS-PSSTQSSGAQSTLTTPSPNPSQSTSSLE 525
>U80846-4|AAC70889.1| 1032|Caenorhabditis elegans Hypothetical
protein K06A9.1a protein.
Length = 1032
Score = 25.8 bits (54), Expect = 4.2
Identities = 21/56 (37%), Positives = 28/56 (50%)
Frame = -1
Query: 260 SNSSPGLNFISVVLNVEEVTKLYSSPSLRSSTVGVTALAALRVISPTPSAFMKSLE 93
+NSSP + +S + ++ L S PS SST A + L SP PS SLE
Sbjct: 680 TNSSPSPSSLSP--STSGMSTLTSEPS-PSSTQSSGAQSTLTTPSPNPSQSTSSLE 732
>U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical
protein K06A9.1b protein.
Length = 2232
Score = 25.8 bits (54), Expect = 4.2
Identities = 21/56 (37%), Positives = 28/56 (50%)
Frame = -1
Query: 260 SNSSPGLNFISVVLNVEEVTKLYSSPSLRSSTVGVTALAALRVISPTPSAFMKSLE 93
+NSSP + +S + ++ L S PS SST A + L SP PS SLE
Sbjct: 680 TNSSPSPSSLSP--STSGMSTLTSEPS-PSSTQSSGAQSTLTTPSPNPSQSTSSLE 732
>AF244356-1|AAF70462.1| 288|Caenorhabditis elegans long chain
polyunsaturated fattyacid elongation enzyme protein.
Length = 288
Score = 25.8 bits (54), Expect = 4.2
Identities = 20/66 (30%), Positives = 29/66 (43%), Gaps = 1/66 (1%)
Frame = -1
Query: 251 SPGLNFISVVLNVEEVTKLYSSPSLRSSTVGVTALAALRVISPTPSAFMKSLEVLG-CGH 75
+PG N + LN +YS LRS + V A + S F+ S VL G+
Sbjct: 173 TPGFNRYGIYLNFVVHAFMYSYYFLRSMKIRVPGFIAQAITSLQIVQFIISCAVLAHLGY 232
Query: 74 LVFLTD 57
L+ T+
Sbjct: 233 LMHFTN 238
>Z22176-1|CAA80142.1| 724|Caenorhabditis elegans Hypothetical
protein ZK1098.1 protein.
Length = 724
Score = 25.0 bits (52), Expect = 7.4
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = -1
Query: 212 EEVTKLYSSPSLRSSTVGVTALAA 141
EE+TK P+ +++TV ALAA
Sbjct: 157 EEITKGEQKPAAKAATVDTVALAA 180
>AC091125-4|AAK27888.1| 732|Caenorhabditis elegans Hypothetical
protein Y67D2.6 protein.
Length = 732
Score = 25.0 bits (52), Expect = 7.4
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = +3
Query: 60 GKKYKMTTSENFERFHEGT 116
GK Y++ FERF EGT
Sbjct: 419 GKCYRLYPESEFERFAEGT 437
>AC024831-2|AAN63422.1| 502|Caenorhabditis elegans Hypothetical
protein Y55F3C.7b protein.
Length = 502
Score = 25.0 bits (52), Expect = 7.4
Identities = 14/57 (24%), Positives = 28/57 (49%)
Frame = -3
Query: 243 LELHLRGLECRRGDEIVFVTFLAQLHGWGHSISRLAGDQSHTECLHEIARSSRMWSS 73
L+L+L+ EC ++ T+ + H + + GD+S EIA ++ ++S
Sbjct: 74 LKLNLKSDECGIKYDVASKTYSVTVDVHSHPVLIVEGDKSVNVTCREIANGTQHYAS 130
>AC024831-1|AAN63421.1| 500|Caenorhabditis elegans Hypothetical
protein Y55F3C.7a protein.
Length = 500
Score = 25.0 bits (52), Expect = 7.4
Identities = 14/57 (24%), Positives = 28/57 (49%)
Frame = -3
Query: 243 LELHLRGLECRRGDEIVFVTFLAQLHGWGHSISRLAGDQSHTECLHEIARSSRMWSS 73
L+L+L+ EC ++ T+ + H + + GD+S EIA ++ ++S
Sbjct: 74 LKLNLKSDECGIKYDVASKTYSVTVDVHSHPVLIVEGDKSVNVTCREIANGTQHYAS 130
>U61954-6|AAK29811.2| 459|Caenorhabditis elegans Sand endocytosis
protein familyprotein 1 protein.
Length = 459
Score = 24.6 bits (51), Expect = 9.8
Identities = 7/27 (25%), Positives = 15/27 (55%)
Frame = -3
Query: 183 FLAQLHGWGHSISRLAGDQSHTECLHE 103
F+++ WG S+ + +H + LH+
Sbjct: 82 FVSRCQSWGDSLMTMTSQDNHIQFLHK 108
>AF039710-8|AAB96686.2| 312|Caenorhabditis elegans Hypothetical
protein C46E10.1 protein.
Length = 312
Score = 24.6 bits (51), Expect = 9.8
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = -1
Query: 173 SSTVGVTALAALRVISPTPSAFMKSLEVLGCG 78
++TV T A + PTP+A + ++ GCG
Sbjct: 251 TTTVAETTPAPIPPQKPTPAALGQKEDLTGCG 282
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,839,468
Number of Sequences: 27780
Number of extensions: 107204
Number of successful extensions: 238
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 238
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 238
length of database: 12,740,198
effective HSP length: 65
effective length of database: 10,934,498
effective search space used: 229624458
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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