BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0022_F02
(247 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AM292344-1|CAL23156.1| 291|Tribolium castaneum gustatory recept... 25 0.16
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro... 23 0.64
AM292378-1|CAL23190.2| 387|Tribolium castaneum gustatory recept... 22 0.85
EF222290-1|ABN79650.1| 378|Tribolium castaneum adipokinetic hor... 22 1.1
DQ422965-1|ABE02225.1| 378|Tribolium castaneum adipokinetic hor... 22 1.1
EF592536-1|ABQ95982.1| 598|Tribolium castaneum beta-N-acetylglu... 21 2.6
AM292365-1|CAL23177.1| 313|Tribolium castaneum gustatory recept... 20 3.4
AM292325-1|CAL23137.2| 309|Tribolium castaneum gustatory recept... 20 3.4
EF222295-1|ABN79655.1| 146|Tribolium castaneum arginine vasopre... 20 4.5
DQ414247-1|ABD63009.2| 414|Tribolium castaneum paired protein. 19 7.9
>AM292344-1|CAL23156.1| 291|Tribolium castaneum gustatory receptor
candidate 23 protein.
Length = 291
Score = 24.6 bits (51), Expect = 0.16
Identities = 12/24 (50%), Positives = 15/24 (62%), Gaps = 2/24 (8%)
Frame = +2
Query: 65 TSYGLRDAHLVKQCLHC--INVEQ 130
T G+ H+VKQC H INV+Q
Sbjct: 104 TFAGIEVLHVVKQCYHLQKINVQQ 127
>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
Length = 2700
Score = 22.6 bits (46), Expect = 0.64
Identities = 6/14 (42%), Positives = 11/14 (78%)
Frame = +2
Query: 164 PAMFWTTTEHSPFW 205
P+ +W++T SP+W
Sbjct: 1039 PSTWWSSTTTSPWW 1052
>AM292378-1|CAL23190.2| 387|Tribolium castaneum gustatory receptor
candidate 57 protein.
Length = 387
Score = 22.2 bits (45), Expect = 0.85
Identities = 7/14 (50%), Positives = 11/14 (78%)
Frame = -2
Query: 165 GYQLNRGTKFSCCS 124
GY+L++ F+CCS
Sbjct: 96 GYELSKQEIFNCCS 109
>EF222290-1|ABN79650.1| 378|Tribolium castaneum adipokinetic
hormone receptor protein.
Length = 378
Score = 21.8 bits (44), Expect = 1.1
Identities = 11/16 (68%), Positives = 13/16 (81%)
Frame = -3
Query: 194 NVL*WSKTSLAINSTE 147
N+L WSKTSL N+TE
Sbjct: 25 NLLDWSKTSLD-NATE 39
>DQ422965-1|ABE02225.1| 378|Tribolium castaneum adipokinetic
hormone receptor protein.
Length = 378
Score = 21.8 bits (44), Expect = 1.1
Identities = 11/16 (68%), Positives = 13/16 (81%)
Frame = -3
Query: 194 NVL*WSKTSLAINSTE 147
N+L WSKTSL N+TE
Sbjct: 25 NLLDWSKTSLD-NATE 39
>EF592536-1|ABQ95982.1| 598|Tribolium castaneum
beta-N-acetylglucosaminidase NAG1 protein.
Length = 598
Score = 20.6 bits (41), Expect = 2.6
Identities = 7/12 (58%), Positives = 10/12 (83%)
Frame = +1
Query: 37 NYTLIDPEIYQL 72
NY LIDP++ +L
Sbjct: 131 NYKLIDPDLKEL 142
>AM292365-1|CAL23177.1| 313|Tribolium castaneum gustatory receptor
candidate 44 protein.
Length = 313
Score = 20.2 bits (40), Expect = 3.4
Identities = 6/23 (26%), Positives = 12/23 (52%)
Frame = -2
Query: 165 GYQLNRGTKFSCCSTLMQCRHCF 97
G+ G ++ C+T++ CF
Sbjct: 149 GFSYKCGIQYHICNTVISATVCF 171
>AM292325-1|CAL23137.2| 309|Tribolium castaneum gustatory receptor
candidate 4 protein.
Length = 309
Score = 20.2 bits (40), Expect = 3.4
Identities = 6/23 (26%), Positives = 12/23 (52%)
Frame = -2
Query: 165 GYQLNRGTKFSCCSTLMQCRHCF 97
G+ G ++ C+T++ CF
Sbjct: 145 GFSYKCGIQYHICNTVISATVCF 167
>EF222295-1|ABN79655.1| 146|Tribolium castaneum arginine
vasopressin-like peptide protein.
Length = 146
Score = 19.8 bits (39), Expect = 4.5
Identities = 8/15 (53%), Positives = 9/15 (60%)
Frame = +3
Query: 162 SQRCFGPLQNIRPFG 206
S +CFGP PFG
Sbjct: 53 SGQCFGPSICCGPFG 67
>DQ414247-1|ABD63009.2| 414|Tribolium castaneum paired protein.
Length = 414
Score = 19.0 bits (37), Expect = 7.9
Identities = 7/10 (70%), Positives = 8/10 (80%)
Frame = -3
Query: 89 EHPSIHSWYI 60
E+PSI SW I
Sbjct: 127 ENPSIFSWEI 136
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 58,691
Number of Sequences: 336
Number of extensions: 952
Number of successful extensions: 12
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 46
effective length of database: 107,129
effective search space used: 3749515
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 36 (19.4 bits)
- SilkBase 1999-2023 -