Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0022_F02
         (247 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles ...    24   0.92 
AJ439060-11|CAD27762.1| 1881|Anopheles gambiae putative cell-adh...    23   2.1  
AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.            21   4.9  
AY176050-1|AAO19581.1|  522|Anopheles gambiae cytochrome P450 CY...    21   4.9  
U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse tra...    21   6.5  
AY578812-1|AAT07317.1|  932|Anopheles gambiae wishful thinking p...    21   8.5  

>M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles
           gambiae T1 retroposon. ).
          Length = 975

 Score = 23.8 bits (49), Expect = 0.92
 Identities = 11/28 (39%), Positives = 16/28 (57%)
 Frame = +1

Query: 76  IEGCSSSEAVSTLHQRGAARKLGASVEL 159
           I+GCS  E++  L  R A R+L  +  L
Sbjct: 841 IDGCSRIESIQRLFTRVAFRRLFGAASL 868


>AJ439060-11|CAD27762.1| 1881|Anopheles gambiae putative cell-adhesion
            protein protein.
          Length = 1881

 Score = 22.6 bits (46), Expect = 2.1
 Identities = 9/27 (33%), Positives = 14/27 (51%)
 Frame = -2

Query: 204  QKGECSVVVQNIAGYQLNRGTKFSCCS 124
            +KG       N A YQL R ++ + C+
Sbjct: 1847 RKGFAGAEANNAANYQLKRDSETTLCA 1873


>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
          Length = 3361

 Score = 21.4 bits (43), Expect = 4.9
 Identities = 9/16 (56%), Positives = 13/16 (81%)
 Frame = +1

Query: 130  ARKLGASVELIASDVL 177
            A KLG +V+++A DVL
Sbjct: 1403 ALKLGDTVDIVAVDVL 1418



 Score = 20.6 bits (41), Expect = 8.5
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = +1

Query: 19   VDVFVSNYTLIDPEIYQLW 75
            V  FV+NYT    ++ Q W
Sbjct: 1896 VPFFVANYTSEQMQLQQQW 1914


>AY176050-1|AAO19581.1|  522|Anopheles gambiae cytochrome P450
           CYP12F2 protein.
          Length = 522

 Score = 21.4 bits (43), Expect = 4.9
 Identities = 10/30 (33%), Positives = 17/30 (56%)
 Frame = -2

Query: 171 IAGYQLNRGTKFSCCSTLMQCRHCFTR*AS 82
           + GYQ+ +GT  +  S ++Q    + R AS
Sbjct: 404 LQGYQIPKGTDIAMGSAVLQRSEKYFRRAS 433


>U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse
           transcriptase protein.
          Length = 1049

 Score = 21.0 bits (42), Expect = 6.5
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = +2

Query: 83  DAHLVKQCLHCINVEQHENLVPLL 154
           D H+ K+ +    V Q  N+ PLL
Sbjct: 730 DKHMSKEIVSSSGVPQGSNIGPLL 753


>AY578812-1|AAT07317.1|  932|Anopheles gambiae wishful thinking
           protein.
          Length = 932

 Score = 20.6 bits (41), Expect = 8.5
 Identities = 8/11 (72%), Positives = 9/11 (81%)
 Frame = +1

Query: 79  EGCSSSEAVST 111
           E CSS+E VST
Sbjct: 124 ESCSSNECVST 134


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 262,628
Number of Sequences: 2352
Number of extensions: 4392
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 563,979
effective HSP length: 53
effective length of database: 439,323
effective search space used: 12301044
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)