Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0022_E23
(394 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY058708-1|AAL13937.1| 286|Drosophila melanogaster LD43816p pro... 46 1e-05
AE014297-1454|AAF54752.2| 286|Drosophila melanogaster CG4702-PA... 46 1e-05
BT022912-1|AAY55328.1| 139|Drosophila melanogaster IP04440p pro... 27 6.7
BT022329-1|AAY54745.1| 141|Drosophila melanogaster IP04540p pro... 27 6.7
BT022274-1|AAY54690.1| 139|Drosophila melanogaster IP04740p pro... 27 6.7
BT021954-1|AAX51659.1| 657|Drosophila melanogaster AT15161p pro... 27 6.7
AE014297-4686|AAF57101.1| 143|Drosophila melanogaster CG15550-P... 27 6.7
AE014296-3526|AAF51715.2| 650|Drosophila melanogaster CG32437-P... 27 6.7
AY058470-1|AAL13699.1| 1018|Drosophila melanogaster GH27433p pro... 27 8.9
AF069997-1|AAC62234.1| 1027|Drosophila melanogaster CLOCK protein. 27 8.9
AF067207-1|AAD10630.1| 1023|Drosophila melanogaster CLOCK protein. 27 8.9
AF065133-1|AAC39101.1| 1015|Drosophila melanogaster CLOCK protein. 27 8.9
AE014297-1858|AAF55066.3| 1131|Drosophila melanogaster CG8279-PA... 27 8.9
AE014296-1322|AAX52754.1| 961|Drosophila melanogaster CG7391-PF... 27 8.9
AE014296-1321|AAX52753.1| 1027|Drosophila melanogaster CG7391-PD... 27 8.9
AE014296-1320|AAS65057.1| 1027|Drosophila melanogaster CG7391-PC... 27 8.9
AE014296-1319|AAN12019.1| 1023|Drosophila melanogaster CG7391-PB... 27 8.9
AE014296-1318|AAF50516.1| 1023|Drosophila melanogaster CG7391-PA... 27 8.9
>AY058708-1|AAL13937.1| 286|Drosophila melanogaster LD43816p
protein.
Length = 286
Score = 46.4 bits (105), Expect = 1e-05
Identities = 33/89 (37%), Positives = 51/89 (57%), Gaps = 1/89 (1%)
Frame = +3
Query: 126 KAAGWVFVVLISSSTVLHTFAYPQHVPLISQAPSSVRTHNSPQYYSNSLPASQESQVAQE 305
K ++ + +++S+ +L T+A+PQ + Q R H Q P ++ VA
Sbjct: 6 KVHAYLLLSIVASNCLLMTYAFPQQE--VYQ-----RQHQVTQS-----PVYRDESVA-- 51
Query: 306 RKFAEKPNALKKVALDDL-DEIQTNSISD 389
RKFA KPNA KKVALDD+ D+++TN I +
Sbjct: 52 RKFAVKPNASKKVALDDIEDDLETNQIQE 80
>AE014297-1454|AAF54752.2| 286|Drosophila melanogaster CG4702-PA
protein.
Length = 286
Score = 46.4 bits (105), Expect = 1e-05
Identities = 33/89 (37%), Positives = 51/89 (57%), Gaps = 1/89 (1%)
Frame = +3
Query: 126 KAAGWVFVVLISSSTVLHTFAYPQHVPLISQAPSSVRTHNSPQYYSNSLPASQESQVAQE 305
K ++ + +++S+ +L T+A+PQ + Q R H Q P ++ VA
Sbjct: 6 KVHAYLLLSIVASNCLLMTYAFPQQE--VYQ-----RQHQVTQS-----PVYRDESVA-- 51
Query: 306 RKFAEKPNALKKVALDDL-DEIQTNSISD 389
RKFA KPNA KKVALDD+ D+++TN I +
Sbjct: 52 RKFAVKPNASKKVALDDIEDDLETNQIQE 80
>BT022912-1|AAY55328.1| 139|Drosophila melanogaster IP04440p
protein.
Length = 139
Score = 27.5 bits (58), Expect = 6.7
Identities = 16/45 (35%), Positives = 20/45 (44%)
Frame = +3
Query: 198 HVPLISQAPSSVRTHNSPQYYSNSLPASQESQVAQERKFAEKPNA 332
H P I A R N P+Y P QE + + R+ AEK A
Sbjct: 87 HAPFIPNA----REQNPPEYIPPMDPQEQEQEANEARERAEKARA 127
>BT022329-1|AAY54745.1| 141|Drosophila melanogaster IP04540p
protein.
Length = 141
Score = 27.5 bits (58), Expect = 6.7
Identities = 16/45 (35%), Positives = 20/45 (44%)
Frame = +3
Query: 198 HVPLISQAPSSVRTHNSPQYYSNSLPASQESQVAQERKFAEKPNA 332
H P I A R N P+Y P QE + + R+ AEK A
Sbjct: 89 HAPFIPNA----REQNPPEYIPPMDPQEQEQEANEARERAEKARA 129
>BT022274-1|AAY54690.1| 139|Drosophila melanogaster IP04740p
protein.
Length = 139
Score = 27.5 bits (58), Expect = 6.7
Identities = 16/45 (35%), Positives = 20/45 (44%)
Frame = +3
Query: 198 HVPLISQAPSSVRTHNSPQYYSNSLPASQESQVAQERKFAEKPNA 332
H P I A R N P+Y P QE + + R+ AEK A
Sbjct: 87 HAPFIPNA----REQNPPEYIPPMDPQEQEQEANEARERAEKARA 127
>BT021954-1|AAX51659.1| 657|Drosophila melanogaster AT15161p
protein.
Length = 657
Score = 27.5 bits (58), Expect = 6.7
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = +1
Query: 163 VRQFSTRLHIPNMFHLYHRHP 225
V + TRL + N+ H+YHR P
Sbjct: 195 VEEQMTRLELDNLEHMYHRSP 215
>AE014297-4686|AAF57101.1| 143|Drosophila melanogaster CG15550-PA
protein.
Length = 143
Score = 27.5 bits (58), Expect = 6.7
Identities = 16/45 (35%), Positives = 20/45 (44%)
Frame = +3
Query: 198 HVPLISQAPSSVRTHNSPQYYSNSLPASQESQVAQERKFAEKPNA 332
H P I A R N P+Y P QE + + R+ AEK A
Sbjct: 91 HAPFIPNA----REQNPPEYIPPMDPQEQEQEANEARERAEKARA 131
>AE014296-3526|AAF51715.2| 650|Drosophila melanogaster CG32437-PA
protein.
Length = 650
Score = 27.5 bits (58), Expect = 6.7
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = +1
Query: 163 VRQFSTRLHIPNMFHLYHRHP 225
V + TRL + N+ H+YHR P
Sbjct: 195 VEEQMTRLELDNLEHMYHRSP 215
>AY058470-1|AAL13699.1| 1018|Drosophila melanogaster GH27433p
protein.
Length = 1018
Score = 27.1 bits (57), Expect = 8.9
Identities = 16/50 (32%), Positives = 21/50 (42%)
Frame = +3
Query: 192 PQHVPLISQAPSSVRTHNSPQYYSNSLPASQESQVAQERKFAEKPNALKK 341
P P +QA +T + S ASQ+ R F EKP A +K
Sbjct: 10 PSQSPSQTQASIQTQTSQQDRLAKASTTASQQDVDEVARLFEEKPEAFEK 59
>AF069997-1|AAC62234.1| 1027|Drosophila melanogaster CLOCK protein.
Length = 1027
Score = 27.1 bits (57), Expect = 8.9
Identities = 16/58 (27%), Positives = 26/58 (44%)
Frame = +3
Query: 177 HTFAYPQHVPLISQAPSSVRTHNSPQYYSNSLPASQESQVAQERKFAEKPNALKKVAL 350
HT P+ VPL+ A + + N+ Q+ + P + VA F E P L + +
Sbjct: 576 HTVGTPKMVPLLPIASTQIMAGNACQFPQPAYPLASPQLVAP--TFLEPPQYLTAIPM 631
>AF067207-1|AAD10630.1| 1023|Drosophila melanogaster CLOCK protein.
Length = 1023
Score = 27.1 bits (57), Expect = 8.9
Identities = 16/58 (27%), Positives = 26/58 (44%)
Frame = +3
Query: 177 HTFAYPQHVPLISQAPSSVRTHNSPQYYSNSLPASQESQVAQERKFAEKPNALKKVAL 350
HT P+ VPL+ A + + N+ Q+ + P + VA F E P L + +
Sbjct: 572 HTVGTPKMVPLLPIASTQIMAGNACQFPQPAYPIASPQLVAP--TFLEPPQYLTAIPM 627
>AF065133-1|AAC39101.1| 1015|Drosophila melanogaster CLOCK protein.
Length = 1015
Score = 27.1 bits (57), Expect = 8.9
Identities = 16/58 (27%), Positives = 26/58 (44%)
Frame = +3
Query: 177 HTFAYPQHVPLISQAPSSVRTHNSPQYYSNSLPASQESQVAQERKFAEKPNALKKVAL 350
HT P+ VPL+ A + + N+ Q+ + P + VA F E P L + +
Sbjct: 572 HTVGTPKMVPLLPIASTQIMAGNACQFPQPAYPIASPQLVAP--TFLEPPQYLTAIPM 627
>AE014297-1858|AAF55066.3| 1131|Drosophila melanogaster CG8279-PA
protein.
Length = 1131
Score = 27.1 bits (57), Expect = 8.9
Identities = 16/50 (32%), Positives = 21/50 (42%)
Frame = +3
Query: 192 PQHVPLISQAPSSVRTHNSPQYYSNSLPASQESQVAQERKFAEKPNALKK 341
P P +QA +T + S ASQ+ R F EKP A +K
Sbjct: 123 PSQSPSQTQASIQTQTSQQDRLAKASTTASQQDVDEVARLFEEKPEAFEK 172
>AE014296-1322|AAX52754.1| 961|Drosophila melanogaster CG7391-PF,
isoform F protein.
Length = 961
Score = 27.1 bits (57), Expect = 8.9
Identities = 16/58 (27%), Positives = 26/58 (44%)
Frame = +3
Query: 177 HTFAYPQHVPLISQAPSSVRTHNSPQYYSNSLPASQESQVAQERKFAEKPNALKKVAL 350
HT P+ VPL+ A + + N+ Q+ + P + VA F E P L + +
Sbjct: 510 HTVGTPKMVPLLPIASTQIMAGNACQFPQPAYPLASPQLVAP--TFLEPPQYLTAIPM 565
>AE014296-1321|AAX52753.1| 1027|Drosophila melanogaster CG7391-PD,
isoform D protein.
Length = 1027
Score = 27.1 bits (57), Expect = 8.9
Identities = 16/58 (27%), Positives = 26/58 (44%)
Frame = +3
Query: 177 HTFAYPQHVPLISQAPSSVRTHNSPQYYSNSLPASQESQVAQERKFAEKPNALKKVAL 350
HT P+ VPL+ A + + N+ Q+ + P + VA F E P L + +
Sbjct: 576 HTVGTPKMVPLLPIASTQIMAGNACQFPQPAYPLASPQLVAP--TFLEPPQYLTAIPM 631
>AE014296-1320|AAS65057.1| 1027|Drosophila melanogaster CG7391-PC,
isoform C protein.
Length = 1027
Score = 27.1 bits (57), Expect = 8.9
Identities = 16/58 (27%), Positives = 26/58 (44%)
Frame = +3
Query: 177 HTFAYPQHVPLISQAPSSVRTHNSPQYYSNSLPASQESQVAQERKFAEKPNALKKVAL 350
HT P+ VPL+ A + + N+ Q+ + P + VA F E P L + +
Sbjct: 576 HTVGTPKMVPLLPIASTQIMAGNACQFPQPAYPLASPQLVAP--TFLEPPQYLTAIPM 631
>AE014296-1319|AAN12019.1| 1023|Drosophila melanogaster CG7391-PB,
isoform B protein.
Length = 1023
Score = 27.1 bits (57), Expect = 8.9
Identities = 16/58 (27%), Positives = 26/58 (44%)
Frame = +3
Query: 177 HTFAYPQHVPLISQAPSSVRTHNSPQYYSNSLPASQESQVAQERKFAEKPNALKKVAL 350
HT P+ VPL+ A + + N+ Q+ + P + VA F E P L + +
Sbjct: 572 HTVGTPKMVPLLPIASTQIMAGNACQFPQPAYPLASPQLVAP--TFLEPPQYLTAIPM 627
>AE014296-1318|AAF50516.1| 1023|Drosophila melanogaster CG7391-PA,
isoform A protein.
Length = 1023
Score = 27.1 bits (57), Expect = 8.9
Identities = 16/58 (27%), Positives = 26/58 (44%)
Frame = +3
Query: 177 HTFAYPQHVPLISQAPSSVRTHNSPQYYSNSLPASQESQVAQERKFAEKPNALKKVAL 350
HT P+ VPL+ A + + N+ Q+ + P + VA F E P L + +
Sbjct: 572 HTVGTPKMVPLLPIASTQIMAGNACQFPQPAYPLASPQLVAP--TFLEPPQYLTAIPM 627
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,189,645
Number of Sequences: 53049
Number of extensions: 354768
Number of successful extensions: 1128
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1065
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1123
length of database: 24,988,368
effective HSP length: 77
effective length of database: 20,903,595
effective search space used: 1107890535
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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