Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0022_E21
(438 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_06_0116 - 25719030-25719458,25720138-25720301,25720390-257206... 40 0.001
01_05_0108 + 18183250-18183336,18183451-18183962,18184074-181842... 39 0.002
11_06_0689 - 26294961-26294976,26295271-26295414,26295506-262959... 38 0.003
02_04_0414 - 22685981-22686178,22686374-22686465,22686580-226866... 37 0.008
02_05_0540 + 29852109-29852195,29852304-29852477,29852585-298528... 36 0.019
07_03_0603 - 19890664-19890823,19891104-19891329,19891498-198916... 33 0.076
02_05_0924 - 32749682-32750200,32750756-32750959,32751062-327511... 31 0.53
01_06_0952 - 33310262-33310273,33310468-33311142 30 0.93
01_06_1436 - 37353741-37354525,37356508-37356619 29 1.2
02_05_0607 - 30315982-30316215,30316688-30316831,30316902-303169... 28 2.9
01_01_0857 - 6693460-6693991,6695086-6695165,6695508-6697448 28 2.9
06_01_0452 + 3198475-3198962,3199062-3199191,3199332-3199497,319... 28 3.8
04_01_0125 - 1317328-1318049,1318061-1319035,1320994-1321143,132... 28 3.8
06_01_0780 + 5824367-5825335 27 6.6
07_01_0234 + 1715338-1718233,1718351-1718760 27 8.7
>05_06_0116 -
25719030-25719458,25720138-25720301,25720390-25720643,
25720727-25720782,25721032-25721169,25721315-25721421,
25721502-25721681,25721757-25721852,25721926-25722007,
25722084-25722425,25722666-25722695,25722788-25722880,
25722963-25723040,25723122-25723222,25723833-25724058,
25724647-25724760,25724855-25725009,25725515-25725554
Length = 894
Score = 39.5 bits (88), Expect = 0.001
Identities = 31/108 (28%), Positives = 50/108 (46%), Gaps = 2/108 (1%)
Frame = +1
Query: 121 ETLEWIRKLTGEPA-NTDGSADNLYEILKDGTLLCKLVNTIQEGSVKKV-NQSTMAFKCM 294
E +EW+ L E D S D L E+L DGT+LC +VN + G +++ + +
Sbjct: 19 EVIEWLNALLPEYCLPLDSSDDELRELLSDGTVLCHIVNALIPGVLEESWGAYASSDQHA 78
Query: 295 ENINACVEAVKKLGVPPQETFQTID*WERQNLYSVVTCLQSLGRKASN 438
++ + V +G+P F D E ++ VV CL L S+
Sbjct: 79 GHVKKFLAVVADMGLP---GFSVKD-LEEGSMSGVVDCLLVLRESVSS 122
>01_05_0108 +
18183250-18183336,18183451-18183962,18184074-18184245,
18184984-18185022,18185117-18185185,18185281-18185397,
18185842-18186056,18187085-18187240,18187328-18187527,
18187927-18188084,18188321-18188417,18188738-18188829,
18189018-18189191
Length = 695
Score = 39.1 bits (87), Expect = 0.002
Identities = 19/60 (31%), Positives = 34/60 (56%), Gaps = 4/60 (6%)
Frame = +1
Query: 169 DGSADNLYEILKDGTLLCKLVNTIQEGSV--KKVNQSTM--AFKCMENINACVEAVKKLG 336
D + D+L+ + KDG LLCKL+N G++ + +N + ++ EN C+ + K +G
Sbjct: 183 DPATDHLFHLTKDGVLLCKLINLAVPGTIDERAINTKKLLNLWEKNENHTLCLNSAKAIG 242
>11_06_0689 -
26294961-26294976,26295271-26295414,26295506-26295909,
26296112-26296261,26296334-26296497,26296526-26296836,
26296948-26297084,26297276-26297416,26297821-26297867,
26297977-26298072,26298168-26298249,26298332-26298472,
26298607-26298702,26298809-26298877,26298959-26299030,
26299201-26299368,26299577-26299711,26299792-26299958,
26301213-26301369
Length = 898
Score = 38.3 bits (85), Expect = 0.003
Identities = 31/114 (27%), Positives = 53/114 (46%), Gaps = 13/114 (11%)
Frame = +1
Query: 118 HETLEWIRKLTGEPANTDGSADNLYEI----LKDGTLLCKLVNTIQEGSVKKV------- 264
+E W+R++ G D + + E L++G +LC +N +Q GSV KV
Sbjct: 57 YEAANWLRRVVGVVCGKDLAEEPSEEEFRLGLRNGIVLCNALNKVQPGSVPKVVEAPSDS 116
Query: 265 --NQSTMAFKCMENINACVEAVKKLGVPPQETFQTID*WERQNLYSVVTCLQSL 420
+ A++ EN+ + ++ LG+P TF+ D + VV C+ SL
Sbjct: 117 ADGAALCAYQYFENVRNFLMGLQDLGLP---TFEASDLEKGGKGVRVVDCVLSL 167
>02_04_0414 -
22685981-22686178,22686374-22686465,22686580-22686676,
22686801-22686916,22687314-22687513,22687588-22687740,
22687960-22688171,22688403-22688519,22688613-22688687,
22688815-22688853,22689518-22689689,22689809-22690056,
22690151-22690324,22690418-22690504
Length = 659
Score = 36.7 bits (81), Expect = 0.008
Identities = 17/60 (28%), Positives = 35/60 (58%), Gaps = 4/60 (6%)
Frame = +1
Query: 169 DGSADNLYEILKDGTLLCKLVNTIQEGSV--KKVN--QSTMAFKCMENINACVEAVKKLG 336
D S ++++ +++DG LLCKL+N G++ + +N + ++ EN C+ + K +G
Sbjct: 153 DPSTNDIFNLVRDGVLLCKLINVAVPGTIDERAINTKKDPNPWERNENHTLCLNSAKAIG 212
>02_05_0540 +
29852109-29852195,29852304-29852477,29852585-29852841,
29852954-29853125,29853513-29853551,29853647-29853715,
29853795-29853911,29854190-29854401,29854578-29854736,
29854810-29855009,29855100-29855266,29855346-29855442,
29855560-29855651,29855861-29856139
Length = 706
Score = 35.5 bits (78), Expect = 0.019
Identities = 16/56 (28%), Positives = 34/56 (60%), Gaps = 4/56 (7%)
Frame = +1
Query: 181 DNLYEILKDGTLLCKLVNTIQEGSV--KKVNQSTM--AFKCMENINACVEAVKKLG 336
+ L+++++DG LLCKL+N G++ + +N+ + ++ EN C+ + K +G
Sbjct: 160 NQLFDLVRDGVLLCKLINLAVPGTIDERAINKKRVLNPWERNENHTLCLNSAKAIG 215
>07_03_0603 -
19890664-19890823,19891104-19891329,19891498-19891636,
19891849-19891942,19892291-19892311,19892506-19892941,
19893133-19893280,19893369-19893476,19893543-19893659,
19893960-19894016,19894488-19894553,19895140-19895328,
19895410-19895523,19895684-19895766,19895857-19896322,
19896832-19897476
Length = 1022
Score = 33.5 bits (73), Expect = 0.076
Identities = 16/61 (26%), Positives = 32/61 (52%), Gaps = 3/61 (4%)
Frame = +1
Query: 169 DGSADNLYEILKDGTLLCKLVNTIQEGS---VKKVNQSTMAFKCMENINACVEAVKKLGV 339
D + NL+E L+DG +LC+++ + + +K + S K + N ++ +K+ G
Sbjct: 405 DFTVGNLFEDLQDGIILCRIIQLLTSDASIILKVIAPSDTYKKRLHNCTMAIQYIKQAGF 464
Query: 340 P 342
P
Sbjct: 465 P 465
>02_05_0924 - 32749682-32750200,32750756-32750959,32751062-32751109,
32751769-32751819,32751907-32752032,32752117-32752257,
32752750-32752971,32753160-32753312,32753536-32753718,
32753964-32754110,32754212-32754319,32754426-32754530,
32754824-32754928,32755243-32755310,32755498-32755576,
32755876-32755935,32756023-32756076,32756168-32756233,
32756701-32756753,32757042-32757096,32757645-32757787,
32758236-32758333,32758436-32758716
Length = 1022
Score = 30.7 bits (66), Expect = 0.53
Identities = 30/125 (24%), Positives = 52/125 (41%), Gaps = 5/125 (4%)
Frame = +1
Query: 7 GSVQLSTP--KMAEYRAGKAGINAEAQARIHSKYNDEVA---HETLEWIRKLTGEPANTD 171
G V L T K AG++ N + Q + K NDE+ H+ R++ +N
Sbjct: 681 GEVALHTSVLKRLTEEAGRSPNNEKIQMEM-KKVNDEIKGKKHQIASLERQIPHSISNNQ 739
Query: 172 GSADNLYEILKDGTLLCKLVNTIQEGSVKKVNQSTMAFKCMENINACVEAVKKLGVPPQE 351
G AD L LL +L + VK + + + E C+E +++ ++
Sbjct: 740 GMADKLELTPSYAELLEQLNEKSFDLEVKAADNRVIQDQLNEKTTECMELQEEVAHLKEQ 799
Query: 352 TFQTI 366
+QT+
Sbjct: 800 LYQTL 804
>01_06_0952 - 33310262-33310273,33310468-33311142
Length = 228
Score = 29.9 bits (64), Expect = 0.93
Identities = 13/23 (56%), Positives = 17/23 (73%)
Frame = +2
Query: 38 PNIALAKLESTPKHRRESTANTT 106
PN+ LAKL S+P+ RR S A +T
Sbjct: 65 PNLRLAKLRSSPRWRRRSAALST 87
>01_06_1436 - 37353741-37354525,37356508-37356619
Length = 298
Score = 29.5 bits (63), Expect = 1.2
Identities = 15/31 (48%), Positives = 23/31 (74%), Gaps = 1/31 (3%)
Frame = +1
Query: 151 GEPANTD-GSADNLYEILKDGTLLCKLVNTI 240
G PA ++ GSADNL ++L+ G LL K ++T+
Sbjct: 253 GRPAGSNLGSADNLGQMLEIGLLLQKALSTL 283
>02_05_0607 -
30315982-30316215,30316688-30316831,30316902-30316989,
30317829-30317934,30318398-30318552,30318630-30318699,
30319940-30320106,30320827-30320894,30322764-30322867,
30322937-30323107,30323113-30323238,30323496-30323663,
30323725-30323908,30324139-30324534
Length = 726
Score = 28.3 bits (60), Expect = 2.9
Identities = 18/58 (31%), Positives = 26/58 (44%)
Frame = -2
Query: 197 ISYKLSADPSVLAGSPVSFLIHSRVSCATSSLYLLWILACASALIPALPARYSAIFGV 24
+ +K S D VL F++ C YL ACA + A P+ Y A+FG+
Sbjct: 188 VDFKKSDDEQVLHDFVGKFVVGYMPVCGEKEYYL----ACACGELYAPPSAYVALFGL 241
>01_01_0857 - 6693460-6693991,6695086-6695165,6695508-6697448
Length = 850
Score = 28.3 bits (60), Expect = 2.9
Identities = 14/46 (30%), Positives = 23/46 (50%)
Frame = -2
Query: 197 ISYKLSADPSVLAGSPVSFLIHSRVSCATSSLYLLWILACASALIP 60
+S+ L P A +P+SF +H + + L L + ACA +P
Sbjct: 71 LSFSLLPGPLPAAPAPLSFHLHGETLASLAPLRRLALPACAHRRVP 116
>06_01_0452 +
3198475-3198962,3199062-3199191,3199332-3199497,
3199765-3199883,3200056-3200136,3200236-3200322,
3200644-3200715,3200791-3200859,3201349-3201426,
3201540-3201680,3202333-3202386,3202465-3202581
Length = 533
Score = 27.9 bits (59), Expect = 3.8
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +1
Query: 133 WIRKLTGEPANTDGSADNLYEILK 204
W+RK TG PA+ S D+ E LK
Sbjct: 169 WVRKKTGAPASRIQSKDSAEEFLK 192
>04_01_0125 -
1317328-1318049,1318061-1319035,1320994-1321143,
1322242-1322546,1323447-1323565
Length = 756
Score = 27.9 bits (59), Expect = 3.8
Identities = 16/46 (34%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Frame = -2
Query: 227 SLQSRVPSFNISYKLSADPSVLAGSPVSFLIHSRVSC-ATSSLYLL 93
SLQ R+PS+ + Y +S +L G+ + FL + TSS+ +L
Sbjct: 293 SLQGRIPSWMLLYNVSLGFLLLRGNSMDFLDTGNLGANVTSSMEVL 338
>06_01_0780 + 5824367-5825335
Length = 322
Score = 27.1 bits (57), Expect = 6.6
Identities = 20/62 (32%), Positives = 31/62 (50%), Gaps = 6/62 (9%)
Frame = -2
Query: 209 PSFNISYKLSADPSVLAGSPVSFLIHSR-----VSCATSSLYLLWILACAS-ALIPALPA 48
P+ N+S +L P+V AG + L++ V ATS Y ++ A AS A + A+
Sbjct: 55 PATNLSVRLYLPPAVAAGERLPILVYFHGGGFMVESATSPTYHRYLNALASRARVVAVSV 114
Query: 47 RY 42
Y
Sbjct: 115 EY 116
>07_01_0234 + 1715338-1718233,1718351-1718760
Length = 1101
Score = 26.6 bits (56), Expect = 8.7
Identities = 11/38 (28%), Positives = 20/38 (52%)
Frame = -1
Query: 162 SRFAGQFPDPFESFMRYFIVVFAVDSRLCFGVDSSFAS 49
S F G PD +F ++ FA ++L G+ +S ++
Sbjct: 443 SFFTGNLPDYMGNFSNQLVIFFAFGNQLTGGIPASLSN 480
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.317 0.130 0.379
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,139,007
Number of Sequences: 37544
Number of extensions: 275338
Number of successful extensions: 845
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 827
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 845
length of database: 14,793,348
effective HSP length: 76
effective length of database: 11,940,004
effective search space used: 823860276
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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