Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0022_E21
(438 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U97013-5|AAB52338.1| 142|Caenorhabditis elegans Calponin protei... 126 7e-30
Z79755-6|CAB02104.1| 192|Caenorhabditis elegans Hypothetical pr... 124 2e-29
AF169201-2|AAF01679.1| 192|Caenorhabditis elegans CPN-1 protein. 124 2e-29
AF039711-7|AAB96713.3| 154|Caenorhabditis elegans Calponin prot... 116 6e-27
AF040641-1|AAB94947.2| 203|Caenorhabditis elegans Calponin prot... 78 3e-15
U23520-5|AAC46554.4| 975|Caenorhabditis elegans Mammalian vav (... 37 0.006
U23520-4|ABB88236.1| 1007|Caenorhabditis elegans Mammalian vav (... 37 0.006
DQ136172-1|AAZ66767.1| 1007|Caenorhabditis elegans VAV-1 protein. 37 0.006
Z81570-7|CAB04608.2| 4063|Caenorhabditis elegans Hypothetical pr... 34 0.052
Z75956-5|CAB00130.2| 4063|Caenorhabditis elegans Hypothetical pr... 34 0.052
AF053496-1|AAC08577.1| 4063|Caenorhabditis elegans beta chain sp... 34 0.052
U39645-2|AAA80365.2| 638|Caenorhabditis elegans Hypothetical pr... 30 0.85
AY157938-1|AAN35200.1| 1751|Caenorhabditis elegans ANC-1 protein. 29 1.5
AC006834-1|AAF40010.3| 8545|Caenorhabditis elegans Abnormal nucl... 29 1.5
Z77665-9|CAB01223.2| 729|Caenorhabditis elegans Hypothetical pr... 29 2.0
U55369-5|AAM29663.2| 1046|Caenorhabditis elegans Hypothetical pr... 28 2.6
U55369-4|AAM29662.1| 1022|Caenorhabditis elegans Hypothetical pr... 28 2.6
U00036-9|AAK29852.1| 377|Caenorhabditis elegans Hypothetical pr... 28 3.4
U64854-2|AAK77611.1| 2257|Caenorhabditis elegans Uncoordinated p... 27 4.5
U64854-1|AAK77612.2| 2302|Caenorhabditis elegans Uncoordinated p... 27 4.5
AF261891-1|AAF72996.1| 2257|Caenorhabditis elegans beta-spectrin... 27 4.5
AF166170-1|AAD49859.1| 2257|Caenorhabditis elegans beta-G spectr... 27 4.5
AF166169-1|AAD49858.1| 2302|Caenorhabditis elegans beta-G spectr... 27 4.5
AF039044-5|AAG24123.1| 164|Caenorhabditis elegans Hypothetical ... 27 4.5
Z30973-2|CAA83221.2| 163|Caenorhabditis elegans Hypothetical pr... 27 6.0
U33058-1|AAB00542.1| 6632|Caenorhabditis elegans UNC-89 protein. 27 6.0
AF003131-5|AAV34799.1| 5992|Caenorhabditis elegans Uncoordinated... 27 6.0
AF003131-4|AAB54132.2| 6632|Caenorhabditis elegans Uncoordinated... 27 6.0
AF003131-3|AAV34801.1| 7122|Caenorhabditis elegans Uncoordinated... 27 6.0
AF003131-2|AAV34800.1| 7441|Caenorhabditis elegans Uncoordinated... 27 6.0
AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated... 27 6.0
AC024878-1|AAK85513.1| 173|Caenorhabditis elegans Hypothetical ... 27 6.0
Z81465-2|CAB03861.1| 1642|Caenorhabditis elegans Hypothetical pr... 27 7.9
U61951-3|AAB03158.4| 1783|Caenorhabditis elegans Egg laying defe... 27 7.9
U61951-2|AAM75372.1| 1877|Caenorhabditis elegans Egg laying defe... 27 7.9
AF023602-1|AAC47755.1| 1783|Caenorhabditis elegans putative L-ty... 27 7.9
>U97013-5|AAB52338.1| 142|Caenorhabditis elegans Calponin protein 3
protein.
Length = 142
Score = 126 bits (304), Expect = 7e-30
Identities = 63/127 (49%), Positives = 82/127 (64%)
Frame = +1
Query: 46 RAGKAGINAEAQARIHSKYNDEVAHETLEWIRKLTGEPANTDGSADNLYEILKDGTLLCK 225
R GI + + SK+ D+ A LEWI+KL+GE +T G DN + +LKDGTLLCK
Sbjct: 4 RTTAGGIGFAVRQKQDSKFIDKEATLLLEWIKKLSGENISTSGERDNFHNLLKDGTLLCK 63
Query: 226 LVNTIQEGSVKKVNQSTMAFKCMENINACVEAVKKLGVPPQETFQTID*WERQNLYSVVT 405
N I+ GS+KKV + F CMENINA VE KK GVP +ETFQ+++ E ++L+SV
Sbjct: 64 AANGIEAGSIKKVQKPISTFACMENINAFVEFAKKQGVPNEETFQSVELVEGRDLFSVCV 123
Query: 406 CLQSLGR 426
L SLGR
Sbjct: 124 TLLSLGR 130
>Z79755-6|CAB02104.1| 192|Caenorhabditis elegans Hypothetical
protein F43G9.9 protein.
Length = 192
Score = 124 bits (300), Expect = 2e-29
Identities = 61/129 (47%), Positives = 90/129 (69%)
Frame = +1
Query: 46 RAGKAGINAEAQARIHSKYNDEVAHETLEWIRKLTGEPANTDGSADNLYEILKDGTLLCK 225
RA K+GI EAQ +I+ KY+ +A E L+W++ +TG+ +T G ADNL ++ +DG+LLC
Sbjct: 9 RAEKSGIALEAQQKIYEKYDKNLAGEILQWVQNVTGQSFDTQGDADNLVKVFQDGSLLCT 68
Query: 226 LVNTIQEGSVKKVNQSTMAFKCMENINACVEAVKKLGVPPQETFQTID*WERQNLYSVVT 405
L N+++ GSVKKVN S MAFK MENI+ ++ ++ V E FQT+D +E Q+ +V+
Sbjct: 69 LANSLKPGSVKKVNTSAMAFKKMENISFFLKFAEEY-VQKSELFQTVDLYEGQDPNAVLI 127
Query: 406 CLQSLGRKA 432
CL SL RK+
Sbjct: 128 CLASLARKS 136
>AF169201-2|AAF01679.1| 192|Caenorhabditis elegans CPN-1 protein.
Length = 192
Score = 124 bits (300), Expect = 2e-29
Identities = 61/129 (47%), Positives = 90/129 (69%)
Frame = +1
Query: 46 RAGKAGINAEAQARIHSKYNDEVAHETLEWIRKLTGEPANTDGSADNLYEILKDGTLLCK 225
RA K+GI EAQ +I+ KY+ +A E L+W++ +TG+ +T G ADNL ++ +DG+LLC
Sbjct: 9 RAEKSGIALEAQQKIYEKYDKNLAGEILQWVQNVTGQSFDTQGDADNLVKVFQDGSLLCT 68
Query: 226 LVNTIQEGSVKKVNQSTMAFKCMENINACVEAVKKLGVPPQETFQTID*WERQNLYSVVT 405
L N+++ GSVKKVN S MAFK MENI+ ++ ++ V E FQT+D +E Q+ +V+
Sbjct: 69 LANSLKPGSVKKVNTSAMAFKKMENISFFLKFAEEY-VQKSELFQTVDLYEGQDPNAVLI 127
Query: 406 CLQSLGRKA 432
CL SL RK+
Sbjct: 128 CLASLARKS 136
>AF039711-7|AAB96713.3| 154|Caenorhabditis elegans Calponin protein
4 protein.
Length = 154
Score = 116 bits (280), Expect = 6e-27
Identities = 63/127 (49%), Positives = 80/127 (62%)
Frame = +1
Query: 49 AGKAGINAEAQARIHSKYNDEVAHETLEWIRKLTGEPANTDGSADNLYEILKDGTLLCKL 228
AG AG + QA SK+ND A LEWIR LT E + + S DN E LKDG LCKL
Sbjct: 11 AGMAGAILDKQA---SKFNDVEAGYLLEWIRDLTKEDFDCEASRDNFREQLKDGQRLCKL 67
Query: 229 VNTIQEGSVKKVNQSTMAFKCMENINACVEAVKKLGVPPQETFQTID*WERQNLYSVVTC 408
VN I+ GSVKK+ + F C+ENIN A + LGV +ETFQ++D ++ ++L+SV
Sbjct: 68 VNAIKAGSVKKIMKPISNFNCLENINQFSTAARSLGVKDEETFQSVDLFDGRDLFSVTVT 127
Query: 409 LQSLGRK 429
LQSL RK
Sbjct: 128 LQSLARK 134
>AF040641-1|AAB94947.2| 203|Caenorhabditis elegans Calponin protein
2 protein.
Length = 203
Score = 77.8 bits (183), Expect = 3e-15
Identities = 45/131 (34%), Positives = 71/131 (54%), Gaps = 5/131 (3%)
Frame = +1
Query: 61 GINAEAQARIHSKYNDEVAHETLEWIRKLTGEPANTD----GSADNLYEILKDGTLLCKL 228
G++ E Q + +++ E A E L+WI +TGE + D S+ ++ +LKDG +LCKL
Sbjct: 9 GLSRELQKKNDARFVLEEAIEVLKWIENVTGERFSFDVTTCESSTDVSNLLKDGVMLCKL 68
Query: 229 VNTIQEGSVKKVNQST-MAFKCMENINACVEAVKKLGVPPQETFQTID*WERQNLYSVVT 405
+ + N+ MAF MENI+ + A K+ GV FQT+D +E + Y V+
Sbjct: 69 IEKLDPSCRVVYNKKPKMAFPMMENISNFLAAAKQFGVMEISCFQTVDLYENKQCYKVIE 128
Query: 406 CLQSLGRKASN 438
CL+ L A +
Sbjct: 129 CLRLLAAVAQS 139
>U23520-5|AAC46554.4| 975|Caenorhabditis elegans Mammalian vav
(oncogene) relatedprotein 1, isoform a protein.
Length = 975
Score = 37.1 bits (82), Expect = 0.006
Identities = 20/63 (31%), Positives = 32/63 (50%), Gaps = 5/63 (7%)
Frame = +1
Query: 133 WIRKLTGEPANTDGSADNLYEILKDGTLLCKLVNT-----IQEGSVKKVNQSTMAFKCME 297
W+R + + +G+ +L+DG LLC+L NT I + + + NQ + F C
Sbjct: 14 WLRDMKVLTTDKNGTMLEFASVLRDGILLCRLANTLVPNGIDQKKIMRTNQPS-PFLCCN 72
Query: 298 NIN 306
NIN
Sbjct: 73 NIN 75
>U23520-4|ABB88236.1| 1007|Caenorhabditis elegans Mammalian vav
(oncogene) relatedprotein 1, isoform b protein.
Length = 1007
Score = 37.1 bits (82), Expect = 0.006
Identities = 20/63 (31%), Positives = 32/63 (50%), Gaps = 5/63 (7%)
Frame = +1
Query: 133 WIRKLTGEPANTDGSADNLYEILKDGTLLCKLVNT-----IQEGSVKKVNQSTMAFKCME 297
W+R + + +G+ +L+DG LLC+L NT I + + + NQ + F C
Sbjct: 46 WLRDMKVLTTDKNGTMLEFASVLRDGILLCRLANTLVPNGIDQKKIMRTNQPS-PFLCCN 104
Query: 298 NIN 306
NIN
Sbjct: 105 NIN 107
>DQ136172-1|AAZ66767.1| 1007|Caenorhabditis elegans VAV-1 protein.
Length = 1007
Score = 37.1 bits (82), Expect = 0.006
Identities = 20/63 (31%), Positives = 32/63 (50%), Gaps = 5/63 (7%)
Frame = +1
Query: 133 WIRKLTGEPANTDGSADNLYEILKDGTLLCKLVNT-----IQEGSVKKVNQSTMAFKCME 297
W+R + + +G+ +L+DG LLC+L NT I + + + NQ + F C
Sbjct: 46 WLRDMKVLTTDKNGTMLEFASVLRDGILLCRLANTLVPNGIDQKKIMRTNQPS-PFLCCN 104
Query: 298 NIN 306
NIN
Sbjct: 105 NIN 107
>Z81570-7|CAB04608.2| 4063|Caenorhabditis elegans Hypothetical
protein R31.1 protein.
Length = 4063
Score = 33.9 bits (74), Expect = 0.052
Identities = 16/49 (32%), Positives = 29/49 (59%)
Frame = +1
Query: 184 NLYEILKDGTLLCKLVNTIQEGSVKKVNQSTMAFKCMENINACVEAVKK 330
+L+E + DG +L KL+ I + K N+ M + +EN+N ++ +KK
Sbjct: 74 DLFEDVGDGIMLMKLLEIISGDKLGKPNRGRMRVQKVENLNKVLDFLKK 122
>Z75956-5|CAB00130.2| 4063|Caenorhabditis elegans Hypothetical
protein R31.1 protein.
Length = 4063
Score = 33.9 bits (74), Expect = 0.052
Identities = 16/49 (32%), Positives = 29/49 (59%)
Frame = +1
Query: 184 NLYEILKDGTLLCKLVNTIQEGSVKKVNQSTMAFKCMENINACVEAVKK 330
+L+E + DG +L KL+ I + K N+ M + +EN+N ++ +KK
Sbjct: 74 DLFEDVGDGIMLMKLLEIISGDKLGKPNRGRMRVQKVENLNKVLDFLKK 122
>AF053496-1|AAC08577.1| 4063|Caenorhabditis elegans beta chain
spectrin homolog Sma1 protein.
Length = 4063
Score = 33.9 bits (74), Expect = 0.052
Identities = 16/49 (32%), Positives = 29/49 (59%)
Frame = +1
Query: 184 NLYEILKDGTLLCKLVNTIQEGSVKKVNQSTMAFKCMENINACVEAVKK 330
+L+E + DG +L KL+ I + K N+ M + +EN+N ++ +KK
Sbjct: 74 DLFEDVGDGIMLMKLLEIISGDKLGKPNRGRMRVQKVENLNKVLDFLKK 122
>U39645-2|AAA80365.2| 638|Caenorhabditis elegans Hypothetical
protein C14F11.2 protein.
Length = 638
Score = 29.9 bits (64), Expect = 0.85
Identities = 17/79 (21%), Positives = 35/79 (44%), Gaps = 3/79 (3%)
Frame = +1
Query: 199 LKDGTLLCKLVNTIQEGSV---KKVNQSTMAFKCMENINACVEAVKKLGVPPQETFQTID 369
L DG LCK +N + S+ + S + N++ ++ +K+GVP +D
Sbjct: 548 LSDGQELCKFINKLHPESISLASSTDSSIATTRSKMNVDRFLQYCRKIGVPETTLCSQMD 607
Query: 370 *WERQNLYSVVTCLQSLGR 426
++N V + ++ +
Sbjct: 608 IISKRNPQKVARTVLTVAK 626
>AY157938-1|AAN35200.1| 1751|Caenorhabditis elegans ANC-1 protein.
Length = 1751
Score = 29.1 bits (62), Expect = 1.5
Identities = 14/64 (21%), Positives = 35/64 (54%), Gaps = 2/64 (3%)
Frame = +1
Query: 154 EPANTDGSADNLYEILKDGTLLCKLVNTIQEGSVKKVNQSTMAFKC--MENINACVEAVK 327
E ++ G ++L+E ++DG LLC L+ + G V++ ++ + + N+ + ++
Sbjct: 38 EEHSSSGRIEDLFEDIRDGVLLCHLIEVL-TGEALAVHKGRVSKRVHHIANLTTALTVLR 96
Query: 328 KLGV 339
+ G+
Sbjct: 97 RRGL 100
>AC006834-1|AAF40010.3| 8545|Caenorhabditis elegans Abnormal nuclear
anchorage protein1 protein.
Length = 8545
Score = 29.1 bits (62), Expect = 1.5
Identities = 14/64 (21%), Positives = 35/64 (54%), Gaps = 2/64 (3%)
Frame = +1
Query: 154 EPANTDGSADNLYEILKDGTLLCKLVNTIQEGSVKKVNQSTMAFKC--MENINACVEAVK 327
E ++ G ++L+E ++DG LLC L+ + G V++ ++ + + N+ + ++
Sbjct: 38 EEHSSSGRIEDLFEDIRDGVLLCHLIEVL-TGEALAVHKGRVSKRVHHIANLTTALTVLR 96
Query: 328 KLGV 339
+ G+
Sbjct: 97 RRGL 100
>Z77665-9|CAB01223.2| 729|Caenorhabditis elegans Hypothetical
protein K02E11.1 protein.
Length = 729
Score = 28.7 bits (61), Expect = 2.0
Identities = 21/96 (21%), Positives = 44/96 (45%), Gaps = 1/96 (1%)
Frame = +1
Query: 82 ARIHSKYNDEVAHETLE-WIRKLTGEPANTDGSADNLYEILKDGTLLCKLVNTIQEGSVK 258
++ + K +E + L WI + E N D S+ +I K L C + +T++E S
Sbjct: 44 SKSNKKAENEKKRQVLRNWITRKRREFNNEDSSSQTTSKIPKRAILFCVMTDTVKEKSAL 103
Query: 259 KVNQSTMAFKCMENINACVEAVKKLGVPPQETFQTI 366
+T + +N N ++ + +L + + F+ +
Sbjct: 104 CAIIATKRKRTKKN-NKPIQIIAELRMSTKFHFKRV 138
>U55369-5|AAM29663.2| 1046|Caenorhabditis elegans Hypothetical
protein C18C4.5b protein.
Length = 1046
Score = 28.3 bits (60), Expect = 2.6
Identities = 17/72 (23%), Positives = 33/72 (45%)
Frame = +1
Query: 118 HETLEWIRKLTGEPANTDGSADNLYEILKDGTLLCKLVNTIQEGSVKKVNQSTMAFKCME 297
HE + I KLT + + L L+D LC+ + E + KK ++ + + E
Sbjct: 634 HEAQDEIEKLTNQAGQLKSKNETLTTELEDSQNLCERLKAQYEKADKKYEETKVQLREAE 693
Query: 298 NINACVEAVKKL 333
++ ++A + L
Sbjct: 694 DLADRLQAAQIL 705
>U55369-4|AAM29662.1| 1022|Caenorhabditis elegans Hypothetical
protein C18C4.5a protein.
Length = 1022
Score = 28.3 bits (60), Expect = 2.6
Identities = 17/72 (23%), Positives = 33/72 (45%)
Frame = +1
Query: 118 HETLEWIRKLTGEPANTDGSADNLYEILKDGTLLCKLVNTIQEGSVKKVNQSTMAFKCME 297
HE + I KLT + + L L+D LC+ + E + KK ++ + + E
Sbjct: 634 HEAQDEIEKLTNQAGQLKSKNETLTTELEDSQNLCERLKAQYEKADKKYEETKVQLREAE 693
Query: 298 NINACVEAVKKL 333
++ ++A + L
Sbjct: 694 DLADRLQAAQIL 705
>U00036-9|AAK29852.1| 377|Caenorhabditis elegans Hypothetical
protein R151.1 protein.
Length = 377
Score = 27.9 bits (59), Expect = 3.4
Identities = 12/28 (42%), Positives = 14/28 (50%)
Frame = -1
Query: 147 QFPDPFESFMRYFIVVFAVDSRLCFGVD 64
Q P F F +Y I +FAVD C D
Sbjct: 206 QLPFQFTPFQQYKISIFAVDDSFCHNQD 233
>U64854-2|AAK77611.1| 2257|Caenorhabditis elegans Uncoordinated
protein 70, isoform a protein.
Length = 2257
Score = 27.5 bits (58), Expect = 4.5
Identities = 11/40 (27%), Positives = 21/40 (52%)
Frame = +1
Query: 184 NLYEILKDGTLLCKLVNTIQEGSVKKVNQSTMAFKCMENI 303
+LY ++DG +L +L+ + + K M C+EN+
Sbjct: 63 DLYMDMRDGKMLLRLLAVLSGERLPKPTPGKMRIHCLENV 102
>U64854-1|AAK77612.2| 2302|Caenorhabditis elegans Uncoordinated
protein 70, isoform b protein.
Length = 2302
Score = 27.5 bits (58), Expect = 4.5
Identities = 11/40 (27%), Positives = 21/40 (52%)
Frame = +1
Query: 184 NLYEILKDGTLLCKLVNTIQEGSVKKVNQSTMAFKCMENI 303
+LY ++DG +L +L+ + + K M C+EN+
Sbjct: 63 DLYMDMRDGKMLLRLLAVLSGERLPKPTPGKMRIHCLENV 102
>AF261891-1|AAF72996.1| 2257|Caenorhabditis elegans beta-spectrin
protein.
Length = 2257
Score = 27.5 bits (58), Expect = 4.5
Identities = 11/40 (27%), Positives = 21/40 (52%)
Frame = +1
Query: 184 NLYEILKDGTLLCKLVNTIQEGSVKKVNQSTMAFKCMENI 303
+LY ++DG +L +L+ + + K M C+EN+
Sbjct: 63 DLYMDMRDGKMLLRLLAVLSGERLPKPTPGKMRIHCLENV 102
>AF166170-1|AAD49859.1| 2257|Caenorhabditis elegans beta-G spectrin
protein.
Length = 2257
Score = 27.5 bits (58), Expect = 4.5
Identities = 11/40 (27%), Positives = 21/40 (52%)
Frame = +1
Query: 184 NLYEILKDGTLLCKLVNTIQEGSVKKVNQSTMAFKCMENI 303
+LY ++DG +L +L+ + + K M C+EN+
Sbjct: 63 DLYMDMRDGKMLLRLLAVLSGERLPKPTPGKMRIHCLENV 102
>AF166169-1|AAD49858.1| 2302|Caenorhabditis elegans beta-G spectrin
protein.
Length = 2302
Score = 27.5 bits (58), Expect = 4.5
Identities = 11/40 (27%), Positives = 21/40 (52%)
Frame = +1
Query: 184 NLYEILKDGTLLCKLVNTIQEGSVKKVNQSTMAFKCMENI 303
+LY ++DG +L +L+ + + K M C+EN+
Sbjct: 63 DLYMDMRDGKMLLRLLAVLSGERLPKPTPGKMRIHCLENV 102
>AF039044-5|AAG24123.1| 164|Caenorhabditis elegans Hypothetical
protein F48G7.7 protein.
Length = 164
Score = 27.5 bits (58), Expect = 4.5
Identities = 14/48 (29%), Positives = 22/48 (45%)
Frame = +1
Query: 175 SADNLYEILKDGTLLCKLVNTIQEGSVKKVNQSTMAFKCMENINACVE 318
S D++Y I +GT L +T + K+N +T C N C +
Sbjct: 48 SDDDVYIISGNGTTLSPSTSTTSDPCHDKINNATGVSDCAMRRNLCTD 95
>Z30973-2|CAA83221.2| 163|Caenorhabditis elegans Hypothetical
protein B0284.3 protein.
Length = 163
Score = 27.1 bits (57), Expect = 6.0
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = -1
Query: 99 FAVDSRLCFGVDSSFASAIF 40
F + LCF +DSSF AIF
Sbjct: 43 FQLTHSLCFSIDSSFVFAIF 62
>U33058-1|AAB00542.1| 6632|Caenorhabditis elegans UNC-89 protein.
Length = 6632
Score = 27.1 bits (57), Expect = 6.0
Identities = 27/109 (24%), Positives = 45/109 (41%), Gaps = 5/109 (4%)
Frame = +1
Query: 64 INAEAQARIHSKYNDEVAHETLEWIRKLTGEPANTDGSADNLYEILKDGTLLCKLVNTIQ 243
+N R+ K D + ++ W + G P D YE +DGT + ++ +
Sbjct: 5394 VNGGQPIRLSCKV-DAIPRASVVWYKD--GLPLRADSRTSIQYE--EDGTATLAINDSTE 5448
Query: 244 E--GSVKKVNQS---TMAFKCMENINACVEAVKKLGVPPQETFQTID*W 375
E G+ + V + T+ C N+ + VKK G P T +D W
Sbjct: 5449 EDIGAYRCVATNAHGTINTSCSVNVKVPKQEVKKEGEEPFFTKGLVDLW 5497
>AF003131-5|AAV34799.1| 5992|Caenorhabditis elegans Uncoordinated
protein 89, isoform e protein.
Length = 5992
Score = 27.1 bits (57), Expect = 6.0
Identities = 27/109 (24%), Positives = 45/109 (41%), Gaps = 5/109 (4%)
Frame = +1
Query: 64 INAEAQARIHSKYNDEVAHETLEWIRKLTGEPANTDGSADNLYEILKDGTLLCKLVNTIQ 243
+N R+ K D + ++ W + G P D YE +DGT + ++ +
Sbjct: 4754 VNGGQPIRLSCKV-DAIPRASVVWYKD--GLPLRADSRTSIQYE--EDGTATLAINDSTE 4808
Query: 244 E--GSVKKVNQS---TMAFKCMENINACVEAVKKLGVPPQETFQTID*W 375
E G+ + V + T+ C N+ + VKK G P T +D W
Sbjct: 4809 EDIGAYRCVATNAHGTINTSCSVNVKVPKQEVKKEGEEPFFTKGLVDLW 4857
>AF003131-4|AAB54132.2| 6632|Caenorhabditis elegans Uncoordinated
protein 89, isoform a protein.
Length = 6632
Score = 27.1 bits (57), Expect = 6.0
Identities = 27/109 (24%), Positives = 45/109 (41%), Gaps = 5/109 (4%)
Frame = +1
Query: 64 INAEAQARIHSKYNDEVAHETLEWIRKLTGEPANTDGSADNLYEILKDGTLLCKLVNTIQ 243
+N R+ K D + ++ W + G P D YE +DGT + ++ +
Sbjct: 5394 VNGGQPIRLSCKV-DAIPRASVVWYKD--GLPLRADSRTSIQYE--EDGTATLAINDSTE 5448
Query: 244 E--GSVKKVNQS---TMAFKCMENINACVEAVKKLGVPPQETFQTID*W 375
E G+ + V + T+ C N+ + VKK G P T +D W
Sbjct: 5449 EDIGAYRCVATNAHGTINTSCSVNVKVPKQEVKKEGEEPFFTKGLVDLW 5497
>AF003131-3|AAV34801.1| 7122|Caenorhabditis elegans Uncoordinated
protein 89, isoform g protein.
Length = 7122
Score = 27.1 bits (57), Expect = 6.0
Identities = 27/109 (24%), Positives = 45/109 (41%), Gaps = 5/109 (4%)
Frame = +1
Query: 64 INAEAQARIHSKYNDEVAHETLEWIRKLTGEPANTDGSADNLYEILKDGTLLCKLVNTIQ 243
+N R+ K D + ++ W + G P D YE +DGT + ++ +
Sbjct: 5394 VNGGQPIRLSCKV-DAIPRASVVWYKD--GLPLRADSRTSIQYE--EDGTATLAINDSTE 5448
Query: 244 E--GSVKKVNQS---TMAFKCMENINACVEAVKKLGVPPQETFQTID*W 375
E G+ + V + T+ C N+ + VKK G P T +D W
Sbjct: 5449 EDIGAYRCVATNAHGTINTSCSVNVKVPKQEVKKEGEEPFFTKGLVDLW 5497
>AF003131-2|AAV34800.1| 7441|Caenorhabditis elegans Uncoordinated
protein 89, isoform f protein.
Length = 7441
Score = 27.1 bits (57), Expect = 6.0
Identities = 27/109 (24%), Positives = 45/109 (41%), Gaps = 5/109 (4%)
Frame = +1
Query: 64 INAEAQARIHSKYNDEVAHETLEWIRKLTGEPANTDGSADNLYEILKDGTLLCKLVNTIQ 243
+N R+ K D + ++ W + G P D YE +DGT + ++ +
Sbjct: 4754 VNGGQPIRLSCKV-DAIPRASVVWYKD--GLPLRADSRTSIQYE--EDGTATLAINDSTE 4808
Query: 244 E--GSVKKVNQS---TMAFKCMENINACVEAVKKLGVPPQETFQTID*W 375
E G+ + V + T+ C N+ + VKK G P T +D W
Sbjct: 4809 EDIGAYRCVATNAHGTINTSCSVNVKVPKQEVKKEGEEPFFTKGLVDLW 4857
>AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated
protein 89, isoform b protein.
Length = 8081
Score = 27.1 bits (57), Expect = 6.0
Identities = 27/109 (24%), Positives = 45/109 (41%), Gaps = 5/109 (4%)
Frame = +1
Query: 64 INAEAQARIHSKYNDEVAHETLEWIRKLTGEPANTDGSADNLYEILKDGTLLCKLVNTIQ 243
+N R+ K D + ++ W + G P D YE +DGT + ++ +
Sbjct: 5394 VNGGQPIRLSCKV-DAIPRASVVWYKD--GLPLRADSRTSIQYE--EDGTATLAINDSTE 5448
Query: 244 E--GSVKKVNQS---TMAFKCMENINACVEAVKKLGVPPQETFQTID*W 375
E G+ + V + T+ C N+ + VKK G P T +D W
Sbjct: 5449 EDIGAYRCVATNAHGTINTSCSVNVKVPKQEVKKEGEEPFFTKGLVDLW 5497
>AC024878-1|AAK85513.1| 173|Caenorhabditis elegans Hypothetical
protein Y97E10AL.3 protein.
Length = 173
Score = 27.1 bits (57), Expect = 6.0
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = -2
Query: 206 SFNISYKLSADPSVLAGSPVSFLIHSR 126
+F++ LS DP A P+++L+HSR
Sbjct: 144 AFDMRKSLSRDPEKKAMVPLNYLVHSR 170
>Z81465-2|CAB03861.1| 1642|Caenorhabditis elegans Hypothetical
protein C09F9.2 protein.
Length = 1642
Score = 26.6 bits (56), Expect = 7.9
Identities = 8/21 (38%), Positives = 13/21 (61%)
Frame = -3
Query: 244 LESCSRACKAECRLLISRTSC 182
L C R C+A+C + +R+ C
Sbjct: 500 LNECGRVCEADCFSIFTRSEC 520
>U61951-3|AAB03158.4| 1783|Caenorhabditis elegans Egg laying defective
protein 19,isoform a protein.
Length = 1783
Score = 26.6 bits (56), Expect = 7.9
Identities = 23/70 (32%), Positives = 31/70 (44%), Gaps = 7/70 (10%)
Frame = +3
Query: 72 RSTGENPQQIQR*SSA*NSRMDQETDRRTG*HRRVGRQLVRDIKRR-HSAL------QAR 230
R G ++I+ S +D D + VG +RDI SAL +R
Sbjct: 1706 RIVGAARREIEEAYSLGEQEIDLAADSLAPLMQHVGMHDIRDINENSRSALLRPAENSSR 1765
Query: 231 EHDSRGISQE 260
+HDSRG SQE
Sbjct: 1766 QHDSRGGSQE 1775
>U61951-2|AAM75372.1| 1877|Caenorhabditis elegans Egg laying defective
protein 19,isoform b protein.
Length = 1877
Score = 26.6 bits (56), Expect = 7.9
Identities = 23/70 (32%), Positives = 31/70 (44%), Gaps = 7/70 (10%)
Frame = +3
Query: 72 RSTGENPQQIQR*SSA*NSRMDQETDRRTG*HRRVGRQLVRDIKRR-HSAL------QAR 230
R G ++I+ S +D D + VG +RDI SAL +R
Sbjct: 1800 RIVGAARREIEEAYSLGEQEIDLAADSLAPLMQHVGMHDIRDINENSRSALLRPAENSSR 1859
Query: 231 EHDSRGISQE 260
+HDSRG SQE
Sbjct: 1860 QHDSRGGSQE 1869
>AF023602-1|AAC47755.1| 1783|Caenorhabditis elegans putative L-type
calcium channelalpha 1 subunit protein.
Length = 1783
Score = 26.6 bits (56), Expect = 7.9
Identities = 23/70 (32%), Positives = 31/70 (44%), Gaps = 7/70 (10%)
Frame = +3
Query: 72 RSTGENPQQIQR*SSA*NSRMDQETDRRTG*HRRVGRQLVRDIKRR-HSAL------QAR 230
R G ++I+ S +D D + VG +RDI SAL +R
Sbjct: 1706 RIVGAARREIEEAYSLGEQEIDLAADSLAPLMQHVGMHDIRDINENSRSALLRPAENSSR 1765
Query: 231 EHDSRGISQE 260
+HDSRG SQE
Sbjct: 1766 QHDSRGGSQE 1775
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.317 0.130 0.379
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,849,194
Number of Sequences: 27780
Number of extensions: 226760
Number of successful extensions: 766
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 726
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 762
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 745968860
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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