BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0022_E17
(225 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY263177-1|AAP78792.1| 699|Anopheles gambiae TmcC-like protein ... 23 1.3
AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein. 23 1.3
DQ013848-1|AAY40257.1| 304|Anopheles gambiae CYP325D1 protein. 23 1.8
EF492429-1|ABP35929.1| 155|Anopheles gambiae lysozyme i-2 protein. 22 3.1
AF291654-1|AAG00600.1| 1340|Anopheles gambiae thioester-containi... 21 4.1
AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein. 21 5.4
AJ618922-1|CAF02001.1| 272|Anopheles gambiae odorant-binding pr... 21 5.4
AY170874-1|AAO34131.1| 1221|Anopheles gambiae alkali metal ion/p... 20 9.4
AF515734-1|AAO14865.1| 1325|Anopheles gambiae xanthine dehydroge... 20 9.4
>AY263177-1|AAP78792.1| 699|Anopheles gambiae TmcC-like protein
protein.
Length = 699
Score = 23.0 bits (47), Expect = 1.3
Identities = 13/42 (30%), Positives = 21/42 (50%)
Frame = +1
Query: 94 EVPTKLHGKFEQDGPPFCWSLVTLIQN*KSYPHDIGTNCVYT 219
++PT+ + EQ+G P CW Q K + D T+ + T
Sbjct: 370 QLPTQCYD--EQNGAPQCWETFVGQQFYKLFIVDFATHFLVT 409
>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
Length = 2259
Score = 23.0 bits (47), Expect = 1.3
Identities = 9/28 (32%), Positives = 14/28 (50%)
Frame = -3
Query: 157 PSSNKRVAHPARTFHGALSAPQNVCYAL 74
P+ R+ A HGA P+ +C+ L
Sbjct: 181 PAQRTRILGLAGPLHGAGCTPERLCWEL 208
>DQ013848-1|AAY40257.1| 304|Anopheles gambiae CYP325D1 protein.
Length = 304
Score = 22.6 bits (46), Expect = 1.8
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = -2
Query: 95 SECMLRVVFYNKLNLNTI 42
SEC+L V+F L N +
Sbjct: 31 SECLLNVIFSTTLGANVV 48
>EF492429-1|ABP35929.1| 155|Anopheles gambiae lysozyme i-2 protein.
Length = 155
Score = 21.8 bits (44), Expect = 3.1
Identities = 7/15 (46%), Positives = 8/15 (53%)
Frame = -2
Query: 170 CISVTKLQQKGGPSC 126
C+ T L GGP C
Sbjct: 113 CVDYTMLHVNGGPRC 127
>AF291654-1|AAG00600.1| 1340|Anopheles gambiae thioester-containing
protein I protein.
Length = 1340
Score = 21.4 bits (43), Expect = 4.1
Identities = 8/20 (40%), Positives = 14/20 (70%)
Frame = +3
Query: 132 WATLLLELGNADTELKILPT 191
W+T L G +++L+I+PT
Sbjct: 173 WSTAKLYAGVFESDLQIVPT 192
>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
Length = 3398
Score = 21.0 bits (42), Expect = 5.4
Identities = 7/12 (58%), Positives = 8/12 (66%)
Frame = -2
Query: 143 KGGPSCSNFPWS 108
K PSC FP+S
Sbjct: 1775 KAHPSCEGFPYS 1786
>AJ618922-1|CAF02001.1| 272|Anopheles gambiae odorant-binding
protein OBPjj5a protein.
Length = 272
Score = 21.0 bits (42), Expect = 5.4
Identities = 9/27 (33%), Positives = 13/27 (48%)
Frame = -3
Query: 160 LPSSNKRVAHPARTFHGALSAPQNVCY 80
LP SN+ AR H + + + CY
Sbjct: 145 LPKSNRNCRTAARRNHSSRNTCRRNCY 171
>AY170874-1|AAO34131.1| 1221|Anopheles gambiae alkali metal ion/proton
exchanger 3 protein.
Length = 1221
Score = 20.2 bits (40), Expect = 9.4
Identities = 10/26 (38%), Positives = 13/26 (50%)
Frame = -3
Query: 172 SVSALPSSNKRVAHPARTFHGALSAP 95
S A+P N + P R +GA AP
Sbjct: 1103 SGEAIPEENYTKSLPERDKYGARRAP 1128
>AF515734-1|AAO14865.1| 1325|Anopheles gambiae xanthine dehydrogenase
protein.
Length = 1325
Score = 20.2 bits (40), Expect = 9.4
Identities = 8/23 (34%), Positives = 11/23 (47%)
Frame = -2
Query: 176 QFCISVTKLQQKGGPSCSNFPWS 108
+F TK Q GG + PW+
Sbjct: 1300 KFVERFTKQQSNGGEAARVVPWN 1322
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 267,169
Number of Sequences: 2352
Number of extensions: 4301
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 563,979
effective HSP length: 51
effective length of database: 444,027
effective search space used: 10212621
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)
- SilkBase 1999-2023 -