Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0022_E17
         (225 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ257415-1|ABB81846.1|  430|Apis mellifera yellow-like protein p...    23   0.61 
DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related pro...    20   3.2  
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    20   4.3  
EF117814-1|ABO38437.1|  570|Apis mellifera cryptochrome 2 protein.     19   5.7  
EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.          19   7.5  
EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.      19   7.5  
AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase pro...    19   7.5  
D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.    19   9.9  
DQ257416-1|ABB81847.1|  552|Apis mellifera yellow-h protein.           19   9.9  
AY526236-1|AAS20469.1|   85|Apis mellifera epoxide hydrolase pro...    19   9.9  
AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase pro...    19   9.9  

>DQ257415-1|ABB81846.1|  430|Apis mellifera yellow-like protein
           protein.
          Length = 430

 Score = 22.6 bits (46), Expect = 0.61
 Identities = 8/15 (53%), Positives = 8/15 (53%)
 Frame = -2

Query: 137 GPSCSNFPWSFVGTS 93
           G  C N  W FVG S
Sbjct: 410 GTICENSAWGFVGNS 424


>DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related
           protein STG-1 protein.
          Length = 397

 Score = 20.2 bits (40), Expect = 3.2
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = +1

Query: 91  SEVPTKLHGKFEQDGPPFCW 150
           +EV +KL  +    GPPF +
Sbjct: 206 AEVGSKLRPRSSFQGPPFTY 225


>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
           protein.
          Length = 1370

 Score = 19.8 bits (39), Expect = 4.3
 Identities = 10/35 (28%), Positives = 19/35 (54%), Gaps = 2/35 (5%)
 Frame = -2

Query: 170 CISVTKLQQKGGPSCS--NFPWSFVGTSECMLRVV 72
           C++ T L +  G SC   +   +   +++C LRV+
Sbjct: 17  CLASTILSESAGTSCKWLSEGGNDTRSADCTLRVL 51


>EF117814-1|ABO38437.1|  570|Apis mellifera cryptochrome 2 protein.
          Length = 570

 Score = 19.4 bits (38), Expect = 5.7
 Identities = 5/13 (38%), Positives = 7/13 (53%)
 Frame = -2

Query: 149 QQKGGPSCSNFPW 111
           + +G P C   PW
Sbjct: 325 RMQGNPICVQIPW 337



 Score = 19.4 bits (38), Expect = 5.7
 Identities = 10/23 (43%), Positives = 11/23 (47%)
 Frame = -3

Query: 130 PARTFHGALSAPQNVCYALSSII 62
           P R  H   +AP NV  A   II
Sbjct: 457 PTRYIHEPWNAPLNVQRAAKCII 479


>EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.
          Length = 686

 Score = 19.0 bits (37), Expect = 7.5
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = -2

Query: 98  TSECMLRVVFYNKLN 54
           TS  M   +FY+KLN
Sbjct: 570 TSTIMPSDIFYDKLN 584


>EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.
          Length = 686

 Score = 19.0 bits (37), Expect = 7.5
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = -2

Query: 98  TSECMLRVVFYNKLN 54
           TS  M   +FY+KLN
Sbjct: 570 TSTIMPSDIFYDKLN 584


>AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase
           protein.
          Length = 580

 Score = 19.0 bits (37), Expect = 7.5
 Identities = 5/16 (31%), Positives = 10/16 (62%)
 Frame = -1

Query: 204 CANVMWVRFSILYQRY 157
           C +  W + +++YQ Y
Sbjct: 21  CVDANWYKNALVYQIY 36


>D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.
          Length = 567

 Score = 18.6 bits (36), Expect = 9.9
 Identities = 7/23 (30%), Positives = 11/23 (47%)
 Frame = -3

Query: 157 PSSNKRVAHPARTFHGALSAPQN 89
           P +N  + HP +  +G    P N
Sbjct: 141 PYNNYYIWHPGKIVNGKRVPPTN 163


>DQ257416-1|ABB81847.1|  552|Apis mellifera yellow-h protein.
          Length = 552

 Score = 18.6 bits (36), Expect = 9.9
 Identities = 8/22 (36%), Positives = 10/22 (45%)
 Frame = +1

Query: 88  HSEVPTKLHGKFEQDGPPFCWS 153
           H   P  L  K+E  G  F W+
Sbjct: 351 HFFYPDPLASKYELHGLKFQWT 372


>AY526236-1|AAS20469.1|   85|Apis mellifera epoxide hydrolase
           protein.
          Length = 85

 Score = 18.6 bits (36), Expect = 9.9
 Identities = 7/10 (70%), Positives = 7/10 (70%)
 Frame = -2

Query: 125 SNFPWSFVGT 96
           SN  W FVGT
Sbjct: 35  SNLFWLFVGT 44


>AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase
           protein.
          Length = 567

 Score = 18.6 bits (36), Expect = 9.9
 Identities = 7/23 (30%), Positives = 11/23 (47%)
 Frame = -3

Query: 157 PSSNKRVAHPARTFHGALSAPQN 89
           P +N  + HP +  +G    P N
Sbjct: 141 PYNNYYIWHPGKIVNGKRVPPTN 163


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 67,753
Number of Sequences: 438
Number of extensions: 1174
Number of successful extensions: 12
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 46
effective length of database: 126,195
effective search space used:  3533460
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 36 (19.4 bits)