Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0022_E12
         (455 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR542144-1|CAG46941.1|   82|Homo sapiens P8 protein.                   56   6e-08
BT006896-1|AAP35542.1|   82|Homo sapiens p8 protein (candidate o...    56   6e-08
BC002434-1|AAH02434.1|   82|Homo sapiens nuclear protein 1 protein.    56   6e-08
AF135266-1|AAD49221.1|   82|Homo sapiens p8 protein homolog prot...    56   6e-08
AF069074-1|AAC19385.1|   82|Homo sapiens P8 protein protein.           56   6e-08
AF069073-1|AAC19384.1|   82|Homo sapiens P8 protein protein.           56   6e-08
AC002425-2|AAC05336.1|   82|Homo sapiens Gene product with simil...    56   6e-08
AC002425-1|AAC05335.1|  100|Homo sapiens Gene product with simil...    52   9e-07
AK125657-1|BAC86234.1|  133|Homo sapiens protein ( Homo sapiens ...    31   1.9  
BC053863-1|AAH53863.1|  709|Homo sapiens YTH domain containing 1...    29   5.7  
BC041119-1|AAH41119.1|  727|Homo sapiens YTH domain containing 1...    29   5.7  

>CR542144-1|CAG46941.1|   82|Homo sapiens P8 protein.
          Length = 82

 Score = 56.0 bits (129), Expect = 6e-08
 Identities = 28/65 (43%), Positives = 40/65 (61%), Gaps = 1/65 (1%)
 Frame = +1

Query: 115 EAFFDEYDYYNFDHDKHIFTGHGGKQ-RTKREATEHTNHFDPSGHSRKIVTKLVNTENNK 291
           ++  DE D Y+  H    + G GG++ RTKREA  +TN   P GH RK+VTKL N+E  K
Sbjct: 21  DSSLDESDLYSLAHS---YLGGGGRKGRTKREAAANTNRPSPGGHERKLVTKLQNSERKK 77

Query: 292 KSNKQ 306
           +  ++
Sbjct: 78  RGARR 82


>BT006896-1|AAP35542.1|   82|Homo sapiens p8 protein (candidate of
           metastasis 1) protein.
          Length = 82

 Score = 56.0 bits (129), Expect = 6e-08
 Identities = 28/65 (43%), Positives = 40/65 (61%), Gaps = 1/65 (1%)
 Frame = +1

Query: 115 EAFFDEYDYYNFDHDKHIFTGHGGKQ-RTKREATEHTNHFDPSGHSRKIVTKLVNTENNK 291
           ++  DE D Y+  H    + G GG++ RTKREA  +TN   P GH RK+VTKL N+E  K
Sbjct: 21  DSSLDESDLYSLAHS---YLGGGGRKGRTKREAAANTNRPSPGGHERKLVTKLQNSERKK 77

Query: 292 KSNKQ 306
           +  ++
Sbjct: 78  RGARR 82


>BC002434-1|AAH02434.1|   82|Homo sapiens nuclear protein 1 protein.
          Length = 82

 Score = 56.0 bits (129), Expect = 6e-08
 Identities = 28/65 (43%), Positives = 40/65 (61%), Gaps = 1/65 (1%)
 Frame = +1

Query: 115 EAFFDEYDYYNFDHDKHIFTGHGGKQ-RTKREATEHTNHFDPSGHSRKIVTKLVNTENNK 291
           ++  DE D Y+  H    + G GG++ RTKREA  +TN   P GH RK+VTKL N+E  K
Sbjct: 21  DSSLDESDLYSLAHS---YLGGGGRKGRTKREAAANTNRPSPGGHERKLVTKLQNSERKK 77

Query: 292 KSNKQ 306
           +  ++
Sbjct: 78  RGARR 82


>AF135266-1|AAD49221.1|   82|Homo sapiens p8 protein homolog
           protein.
          Length = 82

 Score = 56.0 bits (129), Expect = 6e-08
 Identities = 28/65 (43%), Positives = 40/65 (61%), Gaps = 1/65 (1%)
 Frame = +1

Query: 115 EAFFDEYDYYNFDHDKHIFTGHGGKQ-RTKREATEHTNHFDPSGHSRKIVTKLVNTENNK 291
           ++  DE D Y+  H    + G GG++ RTKREA  +TN   P GH RK+VTKL N+E  K
Sbjct: 21  DSSLDESDLYSLAHS---YLGGGGRKGRTKREAAANTNRPSPGGHERKLVTKLQNSERKK 77

Query: 292 KSNKQ 306
           +  ++
Sbjct: 78  RGARR 82


>AF069074-1|AAC19385.1|   82|Homo sapiens P8 protein protein.
          Length = 82

 Score = 56.0 bits (129), Expect = 6e-08
 Identities = 28/65 (43%), Positives = 40/65 (61%), Gaps = 1/65 (1%)
 Frame = +1

Query: 115 EAFFDEYDYYNFDHDKHIFTGHGGKQ-RTKREATEHTNHFDPSGHSRKIVTKLVNTENNK 291
           ++  DE D Y+  H    + G GG++ RTKREA  +TN   P GH RK+VTKL N+E  K
Sbjct: 21  DSSLDESDLYSLAHS---YLGGGGRKGRTKREAAANTNRPSPGGHERKLVTKLQNSERKK 77

Query: 292 KSNKQ 306
           +  ++
Sbjct: 78  RGARR 82


>AF069073-1|AAC19384.1|   82|Homo sapiens P8 protein protein.
          Length = 82

 Score = 56.0 bits (129), Expect = 6e-08
 Identities = 28/65 (43%), Positives = 40/65 (61%), Gaps = 1/65 (1%)
 Frame = +1

Query: 115 EAFFDEYDYYNFDHDKHIFTGHGGKQ-RTKREATEHTNHFDPSGHSRKIVTKLVNTENNK 291
           ++  DE D Y+  H    + G GG++ RTKREA  +TN   P GH RK+VTKL N+E  K
Sbjct: 21  DSSLDESDLYSLAHS---YLGGGGRKGRTKREAAANTNRPSPGGHERKLVTKLQNSERKK 77

Query: 292 KSNKQ 306
           +  ++
Sbjct: 78  RGARR 82


>AC002425-2|AAC05336.1|   82|Homo sapiens Gene product with
           similarity to Rat P8 protein.
          Length = 82

 Score = 56.0 bits (129), Expect = 6e-08
 Identities = 28/65 (43%), Positives = 40/65 (61%), Gaps = 1/65 (1%)
 Frame = +1

Query: 115 EAFFDEYDYYNFDHDKHIFTGHGGKQ-RTKREATEHTNHFDPSGHSRKIVTKLVNTENNK 291
           ++  DE D Y+  H    + G GG++ RTKREA  +TN   P GH RK+VTKL N+E  K
Sbjct: 21  DSSLDESDLYSLAHS---YLGGGGRKGRTKREAAANTNRPSPGGHERKLVTKLQNSERKK 77

Query: 292 KSNKQ 306
           +  ++
Sbjct: 78  RGARR 82


>AC002425-1|AAC05335.1|  100|Homo sapiens Gene product with
           similarity to Rat P8 protein.
          Length = 100

 Score = 52.0 bits (119), Expect = 9e-07
 Identities = 24/48 (50%), Positives = 33/48 (68%), Gaps = 1/48 (2%)
 Frame = +1

Query: 166 IFTGHGGKQ-RTKREATEHTNHFDPSGHSRKIVTKLVNTENNKKSNKQ 306
           + TG GG++ RTKREA  +TN   P GH RK+VTKL N+E  K+  ++
Sbjct: 53  LVTGGGGRKGRTKREAAANTNRPSPGGHERKLVTKLQNSERKKRGARR 100


>AK125657-1|BAC86234.1|  133|Homo sapiens protein ( Homo sapiens
           cDNA FLJ43669 fis, clone SYNOV4007430. ).
          Length = 133

 Score = 31.1 bits (67), Expect = 1.9
 Identities = 22/75 (29%), Positives = 31/75 (41%), Gaps = 2/75 (2%)
 Frame = -1

Query: 377 LLSLGNSVIFLLQAILVFIHRYIYCLLDFLLFSVFTNFVTIFLECPEGSK*FVCSVA--S 204
           + S     +F+L +   F  R+   L+      V    ++     P G K F CS    S
Sbjct: 1   MFSYEKYTLFILSSSFFFFFRWSLALVTQA--GVQWRNLSSLQPLPPGFKRFSCSSLPYS 58

Query: 203 RLVRCLPPCPVKMCL 159
              RCLPPCP   C+
Sbjct: 59  WDYRCLPPCPANFCV 73


>BC053863-1|AAH53863.1|  709|Homo sapiens YTH domain containing 1
           protein.
          Length = 709

 Score = 29.5 bits (63), Expect = 5.7
 Identities = 16/55 (29%), Positives = 31/55 (56%), Gaps = 2/55 (3%)
 Frame = +1

Query: 136 DYYNFDHDKHIFTGHGGKQRTKREATEHTNHFDPSGHSRKIVTKLVNT--ENNKK 294
           + YN + ++      G K+++ R  +  T    PS HSR++V+K +++   NNK+
Sbjct: 29  ELYNPESEQDKNEKKGSKRKSDRMESTDTKRQKPSVHSRQLVSKPLSSSVSNNKR 83


>BC041119-1|AAH41119.1|  727|Homo sapiens YTH domain containing 1
           protein.
          Length = 727

 Score = 29.5 bits (63), Expect = 5.7
 Identities = 16/55 (29%), Positives = 31/55 (56%), Gaps = 2/55 (3%)
 Frame = +1

Query: 136 DYYNFDHDKHIFTGHGGKQRTKREATEHTNHFDPSGHSRKIVTKLVNT--ENNKK 294
           + YN + ++      G K+++ R  +  T    PS HSR++V+K +++   NNK+
Sbjct: 29  ELYNPESEQDKNEKKGSKRKSDRMESTDTKRQKPSVHSRQLVSKPLSSSVSNNKR 83


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 63,005,248
Number of Sequences: 237096
Number of extensions: 1269438
Number of successful extensions: 6406
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 6329
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6406
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 3815180866
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)